RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 IL17REQ8NFR9 667 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 TTC8Q8TAM2 541 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 KISS1RQ969F8 398 aaPredicted RBP3.58□□□□□ -1.84
HERC4-201ENST00000277817 HOMER2Q9NSB8 354 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 GINM1Q9NU53 330 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 CCDC163A0A0D9SF12 145 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 GSG1L2A8MUP6 293 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 C6orf229H3BNL8 230 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 PLIN1O60240 522 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 CAND2O75155 1236 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 ALDH1L1O75891 902 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 U2AF1L5P0DN76 240 aaPredicted RBP3.58□□□□□ -1.84
HERC4-201ENST00000277817 ZNF280AP59817 542 aaPredicted RBP3.58□□□□□ -1.84
HERC4-201ENST00000277817 U2AF1Q01081 240 aaKnown RBP eCLIP3.58□□□□□ -1.84
HERC4-201ENST00000277817 TTF1Q15361 905 aaPredicted RBP3.58□□□□□ -1.84
HERC4-201ENST00000277817 DDR2Q16832 855 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 NLRP13Q86W25 1043 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 HOMER1Q86YM7 354 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 HNRNPLLQ8WVV9 542 aaKnown RBP3.58□□□□□ -1.84
HERC4-201ENST00000277817 PANK3Q9H999 370 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 TIAM2Q8IVF5 1701 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 RPGRIP1LQ68CZ1 1315 aa3.58□□□□□ -1.84
HERC4-201ENST00000277817 UPK3BL1B0FP48 263 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 UPK3BL2E5RIL1 263 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 ABLIM3O94929 683 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 DACT2Q5SW24 774 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 ALKBH2Q6NS38 261 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 SEPT12Q8IYM1 358 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.57□□□□□ -1.84
HERC4-201ENST00000277817 ARPC5LQ9BPX5 153 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 NGRNQ9NPE2 291 aaKnown RBP3.57□□□□□ -1.84
HERC4-201ENST00000277817 HCLS1P14317 486 aaPredicted RBP3.57□□□□□ -1.84
HERC4-201ENST00000277817 NAA30Q147X3 362 aaPredicted RBP3.57□□□□□ -1.84
HERC4-201ENST00000277817 LONRF2Q1L5Z9 754 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 MEI1Q5TIA1 1274 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 THEMISQ8N1K5 641 aaPredicted RBP3.57□□□□□ -1.84
HERC4-201ENST00000277817 AFAP1Q8N556 730 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 GPATCH11Q8N954 259 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 ZNF454Q8N9F8 522 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 NUDT16Q96DE0 195 aaKnown RBP3.57□□□□□ -1.84
HERC4-201ENST00000277817 GJD2Q9UKL4 321 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 PLAAQ9Y263 795 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 PPP2R3BQ9Y5P8 575 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 KANK1Q14678 1352 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 POTEB2H3BUK9 544 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 EIF1AYO14602 144 aaKnown RBP3.57□□□□□ -1.84
HERC4-201ENST00000277817 TCERG1O14776 1098 aaKnown RBP3.57□□□□□ -1.84
HERC4-201ENST00000277817 ADCY3O60266 1144 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 DGKGP49619 791 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 INAVAQ3KP66 663 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 FAM83BQ5T0W9 1011 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 C16orf54Q6UWD8 224 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 FAM160A2Q8N612 972 aaPredicted RBP3.57□□□□□ -1.84
HERC4-201ENST00000277817 RDH13Q8NBN7 331 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 THAP3Q8WTV1 239 aaPredicted RBP3.57□□□□□ -1.84
HERC4-201ENST00000277817 NINJ1Q92982 152 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 POLIQ9UNA4 740 aa3.57□□□□□ -1.84
HERC4-201ENST00000277817 SCN11AQ9UI33 1791 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 DDX60Q8IY21 1712 aaKnown RBP3.56□□□□□ -1.84
HERC4-201ENST00000277817 KIF15Q9NS87 1388 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 LIG1P18858 919 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 HSPA1LP34931 641 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 USB1Q9BQ65 265 aaKnown RBP3.56□□□□□ -1.84
HERC4-201ENST00000277817 NIF3L1Q9GZT8 377 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 GGNBP2Q9H3C7 697 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 OSGEPQ9NPF4 335 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 DDX21Q9NR30 783 aaKnown RBP eCLIP3.56□□□□□ -1.84
HERC4-201ENST00000277817 BCS1LQ9Y276 419 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 TRIM27P14373 513 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 TRIM44Q96DX7 344 aaPredicted RBP3.56□□□□□ -1.84
HERC4-201ENST00000277817 IPO9Q96P70 1041 aaKnown RBP3.56□□□□□ -1.84
HERC4-201ENST00000277817 LAMB4A4D0S4 1761 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 ATAD2Q6PL18 1390 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 IBTKQ9P2D0 1353 aaPredicted RBP3.56□□□□□ -1.84
HERC4-201ENST00000277817 GOLGA6L22H0YM25 854 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 KANK3Q6NY19 840 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 KRT77Q7Z794 578 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 NLRP8Q86W28 1048 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 EXOC6Q8TAG9 804 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 MKNK1Q9BUB5 465 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 LRRC4BQ9NT99 713 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 TNS3Q68CZ2 1445 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 CFAP65Q6ZU64 1925 aaKnown RBP3.56□□□□□ -1.84
HERC4-201ENST00000277817 A0A0G2JS52 829 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 TGFB3P10600 412 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 LTKP29376 864 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 ECE1P42892 770 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 ORC1Q13415 861 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 KIAA0319Q5VV43 1072 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 FAM43AQ8N2R8 423 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 SRCIN1Q9C0H9 1055 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 SFMBT1Q9UHJ3 866 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 KLF15Q9UIH9 416 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 TRAK1Q9UPV9 953 aa3.56□□□□□ -1.84
HERC4-201ENST00000277817 RRP7AQ9Y3A4 280 aaKnown RBP3.56□□□□□ -1.84
HERC4-201ENST00000277817 MRC1P22897 1456 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 DISP3Q9P2K9 1392 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 WASHC2AQ641Q2 1341 aa3.55□□□□□ -1.84
HERC4-201ENST00000277817 MYBBP1AQ9BQG0 1328 aaKnown RBP3.55□□□□□ -1.84
HERC4-201ENST00000277817 SYCP2LQ5T4T6 812 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms