RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ZNF277Q9NRM2 450 aaPredicted RBP15.02□□□□□ -0.01
C9orf3-201ENST00000277198 TAF1P21675 1872 aa15.01□□□□□ -0.01
C9orf3-201ENST00000277198 ALDH1B1P30837 517 aa15.01□□□□□ -0.01
C9orf3-201ENST00000277198 GORABQ5T7V8 394 aa15.01□□□□□ -0.01
C9orf3-201ENST00000277198 MRPS27Q92552 414 aaKnown RBP15.01□□□□□ -0.01
C9orf3-201ENST00000277198 RBM17Q96I25 401 aaKnown RBP15.01□□□□□ -0.01
C9orf3-201ENST00000277198 ZNF512BQ96KM6 892 aaPredicted RBP15.01□□□□□ -0.01
C9orf3-201ENST00000277198 POLR3EQ9NVU0 708 aa15.01□□□□□ -0.01
C9orf3-201ENST00000277198 PAXBP1Q9Y5B6 917 aa15.01□□□□□ -0.01
C9orf3-201ENST00000277198 CCDC88AQ3V6T2 1871 aa15.01□□□□□ -0.01
C9orf3-201ENST00000277198 CEP350Q5VT06 3117 aa15.01□□□□□ -0.01
C9orf3-201ENST00000277198 BECN2A8MW95 431 aa15□□□□□ -0.01
C9orf3-201ENST00000277198 IRS4O14654 1257 aaPredicted RBP15□□□□□ -0.01
C9orf3-201ENST00000277198 PPEF1O14829 653 aaPredicted RBP15□□□□□ -0.01
C9orf3-201ENST00000277198 FDPSP14324 419 aaKnown RBP15□□□□□ -0.01
C9orf3-201ENST00000277198 ME1P48163 572 aa15□□□□□ -0.01
C9orf3-201ENST00000277198 DHX8Q14562 1220 aaKnown RBP15□□□□□ -0.01
C9orf3-201ENST00000277198 CEP57L1Q8IYX8 460 aa15□□□□□ -0.01
C9orf3-201ENST00000277198 NCOA7Q8NI08 942 aa15□□□□□ -0.01
C9orf3-201ENST00000277198 XAGE2Q96GT9 111 aa15□□□□□ -0.01
C9orf3-201ENST00000277198 ZNF594Q96JF6 807 aaPredicted RBP15□□□□□ -0.01
C9orf3-201ENST00000277198 CRAMP1Q96RY5 1269 aa15□□□□□ -0.01
C9orf3-201ENST00000277198 GOLPH3LQ9H4A5 285 aa15□□□□□ -0.01
C9orf3-201ENST00000277198 KIF3CO14782 793 aa15□□□□□ -0.01
C9orf3-201ENST00000277198 FKBP4Q02790 459 aaKnown RBP eCLIP15□□□□□ -0.01
C9orf3-201ENST00000277198 CEBPZQ03701 1054 aaKnown RBP15□□□□□ -0.01
C9orf3-201ENST00000277198 MB21D2Q8IYB1 491 aaPredicted RBP15□□□□□ -0.01
C9orf3-201ENST00000277198 FMR1NBQ8N0W7 255 aaPredicted RBP15□□□□□ -0.01
C9orf3-201ENST00000277198 FSIP1Q8NA03 581 aa15□□□□□ -0.01
C9orf3-201ENST00000277198 FBXO18Q8NFZ0 1043 aa15□□□□□ -0.01
C9orf3-201ENST00000277198 CCDC85AQ96PX6 553 aaPredicted RBP15□□□□□ -0.01
C9orf3-201ENST00000277198 BPIFA3Q9BQP9 254 aa15□□□□□ -0.01
C9orf3-201ENST00000277198 PUS3Q9BZE2 481 aaKnown RBP15□□□□□ -0.01
C9orf3-201ENST00000277198 NCOA5Q9HCD5 579 aaKnown RBP15□□□□□ -0.01
C9orf3-201ENST00000277198 LTBP3Q9NS15 1303 aa15□□□□□ -0.01
C9orf3-201ENST00000277198 TIAM2Q8IVF5 1701 aa14.99□□□□□ -0.01
C9orf3-201ENST00000277198 LAMA4Q16363 1823 aa14.99□□□□□ -0.01
C9orf3-201ENST00000277198 FGAP02671 866 aa14.99□□□□□ -0.01
C9orf3-201ENST00000277198 ZNF710Q8N1W2 664 aa14.99□□□□□ -0.01
C9orf3-201ENST00000277198 ZBTB38Q8NAP3 1195 aaPredicted RBP14.99□□□□□ -0.01
C9orf3-201ENST00000277198 LINC00301Q8NCQ3 95 aa14.99□□□□□ -0.01
C9orf3-201ENST00000277198 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.99□□□□□ -0.01
C9orf3-201ENST00000277198 COL4A5P29400 1685 aa14.99□□□□□ -0.01
C9orf3-201ENST00000277198 SMTNL1A8MU46 457 aa14.98□□□□□ -0.01
C9orf3-201ENST00000277198 RIOK3O14730 519 aaKnown RBP14.98□□□□□ -0.01
C9orf3-201ENST00000277198 IFIT5Q13325 482 aaKnown RBP14.98□□□□□ -0.01
C9orf3-201ENST00000277198 WASHC4Q2M389 1173 aa14.98□□□□□ -0.01
C9orf3-201ENST00000277198 SLFNL1Q499Z3 407 aa14.98□□□□□ -0.01
C9orf3-201ENST00000277198 C11orf57Q6ZUT1 292 aaPredicted RBP14.98□□□□□ -0.01
C9orf3-201ENST00000277198 LRRC8AQ8IWT6 810 aa14.98□□□□□ -0.01
C9orf3-201ENST00000277198 C8orf76Q96K31 380 aa14.98□□□□□ -0.01
C9orf3-201ENST00000277198 KCND1Q9NSA2 647 aa14.98□□□□□ -0.01
C9orf3-201ENST00000277198 PCDHA7Q9UN72 937 aa14.98□□□□□ -0.01
C9orf3-201ENST00000277198 CDHR2Q9BYE9 1310 aa14.98□□□□□ -0.01
C9orf3-201ENST00000277198 FOXP2O15409 715 aa14.98□□□□□ -0.01
C9orf3-201ENST00000277198 PRC1O43663 620 aa14.98□□□□□ -0.01
C9orf3-201ENST00000277198 TTF1Q15361 905 aaPredicted RBP14.98□□□□□ -0.01
C9orf3-201ENST00000277198 TTLL5Q6EMB2 1281 aa14.98□□□□□ -0.01
C9orf3-201ENST00000277198 RALYLQ86SE5 291 aaKnown RBP14.98□□□□□ -0.01
C9orf3-201ENST00000277198 CACTINQ8WUQ7 758 aaKnown RBP14.98□□□□□ -0.01
C9orf3-201ENST00000277198 CELF1Q92879 486 aaKnown RBP14.98□□□□□ -0.01
C9orf3-201ENST00000277198 NRBP1Q9UHY1 535 aa14.98□□□□□ -0.01
C9orf3-201ENST00000277198 MYH15Q9Y2K3 1946 aa14.97□□□□□ -0.01
C9orf3-201ENST00000277198 ZNF213O14771 459 aa14.97□□□□□ -0.01
C9orf3-201ENST00000277198 C1QTNF8P60827 252 aa14.97□□□□□ -0.01
C9orf3-201ENST00000277198 LRMPQ12912 555 aa14.97□□□□□ -0.01
C9orf3-201ENST00000277198 SOGA3Q5TF21 947 aa14.97□□□□□ -0.01
C9orf3-201ENST00000277198 DHX40Q8IX18 779 aaKnown RBP14.97□□□□□ -0.01
C9orf3-201ENST00000277198 ANKRD7Q92527 254 aa14.97□□□□□ -0.01
C9orf3-201ENST00000277198 SEC31BQ9NQW1 1179 aa14.97□□□□□ -0.01
C9orf3-201ENST00000277198 IMPACTQ9P2X3 320 aa14.97□□□□□ -0.01
C9orf3-201ENST00000277198 NAP1L2Q9ULW6 460 aaPredicted RBP14.97□□□□□ -0.01
C9orf3-201ENST00000277198 GSDMDP57764 484 aa14.96□□□□□ -0.01
C9orf3-201ENST00000277198 STK38Q15208 465 aa14.96□□□□□ -0.01
C9orf3-201ENST00000277198 SF3A1Q15459 793 aaKnown RBP14.96□□□□□ -0.01
C9orf3-201ENST00000277198 TAF7LQ5H9L4 462 aa14.96□□□□□ -0.01
C9orf3-201ENST00000277198 SDF4Q9BRK5 362 aa14.96□□□□□ -0.01
C9orf3-201ENST00000277198 FTOQ9C0B1 505 aaKnown RBP eCLIP14.96□□□□□ -0.01
C9orf3-201ENST00000277198 ORC3Q9UBD5 711 aaPredicted RBP14.96□□□□□ -0.01
C9orf3-201ENST00000277198 HPS5Q9UPZ3 1129 aa14.96□□□□□ -0.01
C9orf3-201ENST00000277198 KLF18A0A0U1RQI7 1052 aa14.96□□□□□ -0.01
C9orf3-201ENST00000277198 CPLX1O14810 134 aa14.96□□□□□ -0.01
C9orf3-201ENST00000277198 TRDNQ13061 729 aa14.96□□□□□ -0.01
C9orf3-201ENST00000277198 GRAPQ13588 217 aa14.96□□□□□ -0.01
C9orf3-201ENST00000277198 SF3B3Q15393 1217 aaKnown RBP14.96□□□□□ -0.01
C9orf3-201ENST00000277198 MYSM1Q5VVJ2 828 aa14.96□□□□□ -0.01
C9orf3-201ENST00000277198 SMAP1Q8IYB5 467 aaPredicted RBP14.96□□□□□ -0.01
C9orf3-201ENST00000277198 GRAPLQ8TC17 118 aaPredicted RBP14.96□□□□□ -0.01
C9orf3-201ENST00000277198 RRAGCQ9HB90 399 aa14.96□□□□□ -0.01
C9orf3-201ENST00000277198 KIAA1468Q9P260 1216 aa14.96□□□□□ -0.01
C9orf3-201ENST00000277198 ATP6V0A2Q9Y487 856 aa14.96□□□□□ -0.01
C9orf3-201ENST00000277198 GOLGA8BA8MQT2 603 aa14.95□□□□□ -0.02
C9orf3-201ENST00000277198 SPTLC2O15270 562 aa14.95□□□□□ -0.02
C9orf3-201ENST00000277198 GPAA1O43292 621 aa14.95□□□□□ -0.02
C9orf3-201ENST00000277198 CDKL5O76039 1030 aa14.95□□□□□ -0.02
C9orf3-201ENST00000277198 TNNT1P13805 278 aa14.95□□□□□ -0.02
C9orf3-201ENST00000277198 ADORA1P30542 326 aa14.95□□□□□ -0.02
C9orf3-201ENST00000277198 ZAP70P43403 619 aa14.95□□□□□ -0.02
C9orf3-201ENST00000277198 ZRSR1Q15695 479 aaKnown RBP14.95□□□□□ -0.02
C9orf3-201ENST00000277198 CCDC144BQ3MJ40 725 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms