RNA–Protein interactions for RNA: ENST00000269834.1

ZIM3-201, Transcript of zinc finger imprinted 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIM3, Length 2,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3-201ENST00000269834 CEP170BQ9Y4F5 1589 aaPredicted RBP9.17□□□□□ -0.94
ZIM3-201ENST00000269834 USP46P62068 366 aa9.17□□□□□ -0.94
ZIM3-201ENST00000269834 ATP8B2P98198 1209 aa9.17□□□□□ -0.94
ZIM3-201ENST00000269834 UBR7Q8N806 425 aa9.17□□□□□ -0.94
ZIM3-201ENST00000269834 PAGR1Q9BTK6 254 aa9.17□□□□□ -0.94
ZIM3-201ENST00000269834 INO80BQ9C086 356 aaPredicted RBP9.17□□□□□ -0.94
ZIM3-201ENST00000269834 ENAMQ9NRM1 1142 aa9.17□□□□□ -0.94
ZIM3-201ENST00000269834 BMP2KQ9NSY1 1161 aaPredicted RBP9.17□□□□□ -0.94
ZIM3-201ENST00000269834 ATP8A1Q9Y2Q0 1164 aa9.17□□□□□ -0.94
ZIM3-201ENST00000269834 NWD1Q149M9 1564 aa9.16□□□□□ -0.94
ZIM3-201ENST00000269834 RPAP1Q9BWH6 1393 aaPredicted RBP9.16□□□□□ -0.94
ZIM3-201ENST00000269834 ROBO2Q9HCK4 1378 aa9.16□□□□□ -0.94
ZIM3-201ENST00000269834 IGSF1Q8N6C5 1336 aa9.16□□□□□ -0.94
ZIM3-201ENST00000269834 ZBTB39O15060 712 aa9.16□□□□□ -0.94
ZIM3-201ENST00000269834 FGAP02671 866 aa9.16□□□□□ -0.94
ZIM3-201ENST00000269834 SASS6Q6UVJ0 657 aa9.16□□□□□ -0.94
ZIM3-201ENST00000269834 PI16Q6UXB8 463 aa9.16□□□□□ -0.94
ZIM3-201ENST00000269834 STK31Q9BXU1 1019 aa9.16□□□□□ -0.94
ZIM3-201ENST00000269834 TSPYL4Q9UJ04 414 aa9.16□□□□□ -0.94
ZIM3-201ENST00000269834 KLF4O43474 513 aa9.16□□□□□ -0.94
ZIM3-201ENST00000269834 NR1I2O75469 434 aa9.16□□□□□ -0.94
ZIM3-201ENST00000269834 LETM1O95202 739 aaPredicted RBP9.16□□□□□ -0.94
ZIM3-201ENST00000269834 KRT18P05783 430 aaKnown RBP9.16□□□□□ -0.94
ZIM3-201ENST00000269834 EXOSC10Q01780 885 aaKnown RBP9.16□□□□□ -0.94
ZIM3-201ENST00000269834 ORC1Q13415 861 aa9.16□□□□□ -0.94
ZIM3-201ENST00000269834 RAB33AQ14088 237 aa9.16□□□□□ -0.94
ZIM3-201ENST00000269834 CCSAPQ6IQ19 270 aaPredicted RBP9.16□□□□□ -0.94
ZIM3-201ENST00000269834 TRIM50Q86XT4 487 aa9.16□□□□□ -0.94
ZIM3-201ENST00000269834 CELF2-AS1Q8N7Q2 184 aa9.16□□□□□ -0.94
ZIM3-201ENST00000269834 RTF1Q92541 710 aaKnown RBP9.16□□□□□ -0.94
ZIM3-201ENST00000269834 TMEM2Q9UHN6 1383 aa9.15□□□□□ -0.94
ZIM3-201ENST00000269834 ERBB3P21860 1342 aa9.15□□□□□ -0.94
ZIM3-201ENST00000269834 MAP3K19Q56UN5 1328 aa9.15□□□□□ -0.94
ZIM3-201ENST00000269834 NPR3P17342 541 aa9.15□□□□□ -0.94
ZIM3-201ENST00000269834 EVX2Q03828 476 aa9.15□□□□□ -0.94
ZIM3-201ENST00000269834 PPP2R5AQ15172 486 aa9.15□□□□□ -0.94
ZIM3-201ENST00000269834 SLC4A10Q6U841 1118 aa9.15□□□□□ -0.94
ZIM3-201ENST00000269834 C1orf131Q8NDD1 294 aaKnown RBP9.15□□□□□ -0.94
ZIM3-201ENST00000269834 FAM129BQ96TA1 746 aa9.15□□□□□ -0.94
ZIM3-201ENST00000269834 NSFL1CQ9UNZ2 370 aaKnown RBP9.15□□□□□ -0.94
ZIM3-201ENST00000269834 PLEKHG1Q9ULL1 1385 aa9.15□□□□□ -0.95
ZIM3-201ENST00000269834 ACEP12821 1306 aa9.15□□□□□ -0.95
ZIM3-201ENST00000269834 TCHHQ07283 1943 aa9.15□□□□□ -0.95
ZIM3-201ENST00000269834 DYTNA2CJ06 578 aa9.15□□□□□ -0.95
ZIM3-201ENST00000269834 FAM163BP0C2L3 166 aa9.15□□□□□ -0.95
ZIM3-201ENST00000269834 CNGA1P29973 690 aa9.15□□□□□ -0.95
ZIM3-201ENST00000269834 HSPA4P34932 840 aa9.15□□□□□ -0.95
ZIM3-201ENST00000269834 CCDC30Q5VVM6 783 aa9.15□□□□□ -0.95
ZIM3-201ENST00000269834 G2E3Q7L622 706 aa9.15□□□□□ -0.95
ZIM3-201ENST00000269834 ZNF454Q8N9F8 522 aa9.15□□□□□ -0.95
ZIM3-201ENST00000269834 PNMA3Q9UL41 463 aa9.15□□□□□ -0.95
ZIM3-201ENST00000269834 PALD1Q9ULE6 856 aa9.15□□□□□ -0.95
ZIM3-201ENST00000269834 R3HCC1Q9Y3T6 440 aaKnown RBP9.15□□□□□ -0.95
ZIM3-201ENST00000269834 RAD50Q92878 1312 aa9.14□□□□□ -0.95
ZIM3-201ENST00000269834 UQCRHLA0A096LP55 91 aa9.14□□□□□ -0.95
ZIM3-201ENST00000269834 UQCRHP07919 91 aa9.14□□□□□ -0.95
ZIM3-201ENST00000269834 KIAA2012Q0VF49 1180 aa9.14□□□□□ -0.95
ZIM3-201ENST00000269834 KSR2Q6VAB6 950 aa9.14□□□□□ -0.95
ZIM3-201ENST00000269834 EXOC6BQ9Y2D4 811 aa9.14□□□□□ -0.95
ZIM3-201ENST00000269834 ATF3P18847 181 aa9.14□□□□□ -0.95
ZIM3-201ENST00000269834 CDC27P30260 824 aa9.14□□□□□ -0.95
ZIM3-201ENST00000269834 MTHFSDQ2M296 383 aaKnown RBP9.14□□□□□ -0.95
ZIM3-201ENST00000269834 NAP1L4Q99733 375 aaKnown RBP9.14□□□□□ -0.95
ZIM3-201ENST00000269834 ARHGEF10LQ9HCE6 1279 aa9.14□□□□□ -0.95
ZIM3-201ENST00000269834 PCDHGA11Q9Y5H2 935 aa9.14□□□□□ -0.95
ZIM3-201ENST00000269834 RGPD8O14715 1765 aaPredicted RBP9.13□□□□□ -0.95
ZIM3-201ENST00000269834 SLIT1O75093 1534 aa9.13□□□□□ -0.95
ZIM3-201ENST00000269834 ZNF142P52746 1687 aaPredicted RBP9.13□□□□□ -0.95
ZIM3-201ENST00000269834 LMO7Q8WWI1 1683 aa9.13□□□□□ -0.95
ZIM3-201ENST00000269834 CCDC183Q5T5S1 534 aa9.13□□□□□ -0.95
ZIM3-201ENST00000269834 CREBRFQ8IUR6 639 aa9.13□□□□□ -0.95
ZIM3-201ENST00000269834 PAF1Q8N7H5 531 aa9.13□□□□□ -0.95
ZIM3-201ENST00000269834 ST7Q9NRC1 585 aa9.13□□□□□ -0.95
ZIM3-201ENST00000269834 GEMIN8Q9NWZ8 242 aaKnown RBP9.13□□□□□ -0.95
ZIM3-201ENST00000269834 MAP3K5Q99683 1374 aa9.13□□□□□ -0.95
ZIM3-201ENST00000269834 ARHGAP23Q9P227 1491 aa9.13□□□□□ -0.95
ZIM3-201ENST00000269834 OPLAHO14841 1288 aa9.13□□□□□ -0.95
ZIM3-201ENST00000269834 NPHP1O15259 732 aa9.13□□□□□ -0.95
ZIM3-201ENST00000269834 PRPF3O43395 683 aaKnown RBP9.13□□□□□ -0.95
ZIM3-201ENST00000269834 SSH3Q8TE77 659 aa9.13□□□□□ -0.95
ZIM3-201ENST00000269834 AS3MTQ9HBK9 375 aa9.13□□□□□ -0.95
ZIM3-201ENST00000269834 AK5Q9Y6K8 562 aa9.13□□□□□ -0.95
ZIM3-201ENST00000269834 PHRF1Q9P1Y6 1649 aaKnown RBP9.12□□□□□ -0.95
ZIM3-201ENST00000269834 USP42Q9H9J4 1324 aaKnown RBP9.12□□□□□ -0.95
ZIM3-201ENST00000269834 STAU1O95793 577 aaKnown RBP9.12□□□□□ -0.95
ZIM3-201ENST00000269834 DMRTB1Q96MA1 342 aa9.12□□□□□ -0.95
ZIM3-201ENST00000269834 DOLKQ9UPQ8 538 aa9.12□□□□□ -0.95
ZIM3-201ENST00000269834 EFR3BQ9Y2G0 817 aa9.12□□□□□ -0.95
ZIM3-201ENST00000269834 CD2APQ9Y5K6 639 aa9.12□□□□□ -0.95
ZIM3-201ENST00000269834 PNMA6EA0A0J9YXQ4 647 aa9.12□□□□□ -0.95
ZIM3-201ENST00000269834 TRIM6-TRIM34B2RNG4 842 aa9.12□□□□□ -0.95
ZIM3-201ENST00000269834 RAB27AP51159 221 aa9.12□□□□□ -0.95
ZIM3-201ENST00000269834 PRELPP51888 382 aa9.12□□□□□ -0.95
ZIM3-201ENST00000269834 NBPF6Q5VWK0 638 aa9.12□□□□□ -0.95
ZIM3-201ENST00000269834 PDILTQ8N807 584 aa9.12□□□□□ -0.95
ZIM3-201ENST00000269834 MKL1Q969V6 931 aa9.12□□□□□ -0.95
ZIM3-201ENST00000269834 ANAPC16Q96DE5 110 aa9.12□□□□□ -0.95
ZIM3-201ENST00000269834 NBPF4Q96M43 638 aa9.12□□□□□ -0.95
ZIM3-201ENST00000269834 ATP6V1DQ9Y5K8 247 aa9.12□□□□□ -0.95
ZIM3-201ENST00000269834 LTN1O94822 1766 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms