RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 NR5A1Q13285 461 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 MTF1Q14872 753 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 STAMQ92783 540 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 SAMSN1Q9NSI8 373 aaKnown RBP14.22□□□□□ -0.13
CHMP3-201ENST00000263856 TBC1D2BQ9UPU7 963 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 FHOD1Q9Y613 1164 aa14.22□□□□□ -0.13
CHMP3-201ENST00000263856 IKBKBO14920 756 aa14.21□□□□□ -0.13
CHMP3-201ENST00000263856 RANBP6O60518 1105 aaKnown RBP14.21□□□□□ -0.13
CHMP3-201ENST00000263856 VSTM4Q8IW00 320 aa14.21□□□□□ -0.13
CHMP3-201ENST00000263856 DIS3L2Q8IYB7 885 aaKnown RBP14.21□□□□□ -0.13
CHMP3-201ENST00000263856 NBPF3Q9H094 633 aa14.21□□□□□ -0.13
CHMP3-201ENST00000263856 PUF60Q9UHX1 559 aaKnown RBP14.21□□□□□ -0.13
CHMP3-201ENST00000263856 SH2B2O14492 632 aaPredicted RBP14.21□□□□□ -0.14
CHMP3-201ENST00000263856 H2AFXP16104 143 aaPredicted RBP14.21□□□□□ -0.14
CHMP3-201ENST00000263856 FMR1Q06787 632 aaKnown RBP eCLIP14.21□□□□□ -0.14
CHMP3-201ENST00000263856 ARMT1Q9H993 441 aa14.21□□□□□ -0.14
CHMP3-201ENST00000263856 SIPA1L3O60292 1781 aaPredicted RBP14.21□□□□□ -0.14
CHMP3-201ENST00000263856 TDO2P48775 406 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 KRI1Q8N9T8 703 aaKnown RBP14.2□□□□□ -0.14
CHMP3-201ENST00000263856 SMARCE1Q969G3 411 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 DHX58Q96C10 678 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.2□□□□□ -0.14
CHMP3-201ENST00000263856 CIAO1O76071 339 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 PPP2R3AQ06190 1150 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 TRIM65Q6PJ69 517 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 USP49Q70CQ1 688 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 REXO1L1PQ8IX06 675 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 DNAJC10Q8IXB1 793 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 MAGEB6Q8N7X4 407 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 MIGA1Q8NAN2 632 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 UBN2Q6ZU65 1347 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 VWA3AA6NCI4 1184 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 MBD4O95243 580 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 BMP6P22004 513 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 ADD2P35612 726 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 PLA2G4AP47712 749 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 POSTNQ15063 836 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 PTPAQ15257 358 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 CCDC93Q567U6 631 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 SMYD4Q8IYR2 804 aaPredicted RBP14.2□□□□□ -0.14
CHMP3-201ENST00000263856 MAN1B1Q9UKM7 699 aa14.2□□□□□ -0.14
CHMP3-201ENST00000263856 USP54Q70EL1 1684 aa14.19□□□□□ -0.14
CHMP3-201ENST00000263856 SCN11AQ9UI33 1791 aa14.19□□□□□ -0.14
CHMP3-201ENST00000263856 PRKAB2O43741 272 aa14.19□□□□□ -0.14
CHMP3-201ENST00000263856 TCIRG1Q13488 830 aa14.19□□□□□ -0.14
CHMP3-201ENST00000263856 INTS13Q9NVM9 706 aa14.19□□□□□ -0.14
CHMP3-201ENST00000263856 HOOK1Q9UJC3 728 aaKnown RBP14.19□□□□□ -0.14
CHMP3-201ENST00000263856 PARP3Q9Y6F1 533 aa14.19□□□□□ -0.14
CHMP3-201ENST00000263856 MINDY4BA8MYZ0 360 aa14.19□□□□□ -0.14
CHMP3-201ENST00000263856 ARHGAP6O43182 974 aa14.19□□□□□ -0.14
CHMP3-201ENST00000263856 RESP18Q5W5W9 173 aa14.19□□□□□ -0.14
CHMP3-201ENST00000263856 ZSWIM5Q9P217 1185 aa14.19□□□□□ -0.14
CHMP3-201ENST00000263856 TRMT112Q9UI30 125 aaKnown RBP14.19□□□□□ -0.14
CHMP3-201ENST00000263856 TUBE1Q9UJT0 475 aa14.19□□□□□ -0.14
CHMP3-201ENST00000263856 PCDHB6Q9Y5E3 794 aa14.19□□□□□ -0.14
CHMP3-201ENST00000263856 SOWAHDA6NJG2 315 aa14.18□□□□□ -0.14
CHMP3-201ENST00000263856 CUTAO60888 179 aa14.18□□□□□ -0.14
CHMP3-201ENST00000263856 PDE6AP16499 860 aa14.18□□□□□ -0.14
CHMP3-201ENST00000263856 HLFQ16534 295 aa14.18□□□□□ -0.14
CHMP3-201ENST00000263856 TRIM22Q8IYM9 498 aa14.18□□□□□ -0.14
CHMP3-201ENST00000263856 C19orf44Q9H6X5 657 aa14.18□□□□□ -0.14
CHMP3-201ENST00000263856 CABP5Q9NP86 173 aa14.18□□□□□ -0.14
CHMP3-201ENST00000263856 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.18□□□□□ -0.142e-6■■■□□ 16.1
CHMP3-201ENST00000263856 ABCC6O95255 1503 aa14.18□□□□□ -0.14
CHMP3-201ENST00000263856 PHLPP2Q6ZVD8 1323 aa14.18□□□□□ -0.14
CHMP3-201ENST00000263856 A0A0U1RQJ8 604 aa14.18□□□□□ -0.14
CHMP3-201ENST00000263856 ANKRD18BA2A2Z9 1011 aa14.18□□□□□ -0.14
CHMP3-201ENST00000263856 PES1O00541 588 aaKnown RBP14.18□□□□□ -0.14
CHMP3-201ENST00000263856 PPP6R2O75170 966 aa14.18□□□□□ -0.14
CHMP3-201ENST00000263856 TADA3O75528 432 aa14.18□□□□□ -0.14
CHMP3-201ENST00000263856 OAS2P29728 719 aaKnown RBP14.18□□□□□ -0.14
CHMP3-201ENST00000263856 ATRIPQ8WXE1 791 aa14.18□□□□□ -0.14
CHMP3-201ENST00000263856 RNF216Q9NWF9 866 aaPredicted RBP14.18□□□□□ -0.14
CHMP3-201ENST00000263856 NOSTRINQ8IVI9 506 aa14.18□□□□□ -0.14
CHMP3-201ENST00000263856 MAP3K14Q99558 947 aa14.18□□□□□ -0.14
CHMP3-201ENST00000263856 HPSEQ9Y251 543 aa14.18□□□□□ -0.14
CHMP3-201ENST00000263856 CPDO75976 1380 aa14.17□□□□□ -0.14
CHMP3-201ENST00000263856 SLIT3O75094 1523 aa14.17□□□□□ -0.14
CHMP3-201ENST00000263856 ERICH2A1L162 156 aa14.17□□□□□ -0.14
CHMP3-201ENST00000263856 OXER1Q8TDS5 423 aa14.17□□□□□ -0.14
CHMP3-201ENST00000263856 TIGD1Q96MW7 591 aa14.17□□□□□ -0.14
CHMP3-201ENST00000263856 ASAP1Q9ULH1 1129 aa14.17□□□□□ -0.14
CHMP3-201ENST00000263856 FAM205CA6NFA0 338 aa14.17□□□□□ -0.14
CHMP3-201ENST00000263856 VGLL3A8MV65 326 aa14.17□□□□□ -0.14
CHMP3-201ENST00000263856 TEX33O43247 280 aa14.17□□□□□ -0.14
CHMP3-201ENST00000263856 TFRCP02786 760 aaKnown RBP14.17□□□□□ -0.14
CHMP3-201ENST00000263856 EVA1CP58658 441 aa14.17□□□□□ -0.14
CHMP3-201ENST00000263856 ST5P78524 1137 aa14.17□□□□□ -0.14
CHMP3-201ENST00000263856 MCM6Q14566 821 aa14.17□□□□□ -0.14
CHMP3-201ENST00000263856 RTN1Q16799 776 aa14.17□□□□□ -0.14
CHMP3-201ENST00000263856 SPECC1LQ69YQ0 1117 aa14.17□□□□□ -0.14
CHMP3-201ENST00000263856 LY9Q9HBG7 655 aa14.17□□□□□ -0.14
CHMP3-201ENST00000263856 TMOD3Q9NYL9 352 aa14.17□□□□□ -0.14
CHMP3-201ENST00000263856 PRDM1O75626 825 aa14.16□□□□□ -0.14
CHMP3-201ENST00000263856 CCT6AP40227 531 aaKnown RBP14.16□□□□□ -0.14
CHMP3-201ENST00000263856 MFSD6Q6ZSS7 791 aa14.16□□□□□ -0.14
CHMP3-201ENST00000263856 BAZ2BQ9UIF8 2168 aaKnown RBP14.16□□□□□ -0.14
CHMP3-201ENST00000263856 EFCAB8A8MWE9 144 aa14.16□□□□□ -0.14
CHMP3-201ENST00000263856 AKAP17AQ02040 695 aaKnown RBP14.16□□□□□ -0.14
CHMP3-201ENST00000263856 PPFIBP1Q86W92 1011 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms