RNA–Protein interactions for RNA: ENST00000263401.9

COMMD9-201, Transcript of COMM domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD9, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-201ENST00000263401 CCDC69A6NI79 296 aa12.17□□□□□ -0.46
COMMD9-201ENST00000263401 DHX16O60231 1041 aaKnown RBP12.17□□□□□ -0.46
COMMD9-201ENST00000263401 PPARAQ07869 468 aa12.17□□□□□ -0.46
COMMD9-201ENST00000263401 CACNA1SQ13698 1873 aa12.17□□□□□ -0.46
COMMD9-201ENST00000263401 ALX1Q15699 326 aa12.17□□□□□ -0.46
COMMD9-201ENST00000263401 MEX3CQ5U5Q3 659 aaKnown RBP12.17□□□□□ -0.46
COMMD9-201ENST00000263401 FAM196AQ6ZSG2 479 aa12.17□□□□□ -0.46
COMMD9-201ENST00000263401 FAM200AQ8TCP9 573 aa12.17□□□□□ -0.46
COMMD9-201ENST00000263401 NLRP3Q96P20 1036 aa12.17□□□□□ -0.46
COMMD9-201ENST00000263401 KCNJ14Q9UNX9 436 aa12.17□□□□□ -0.46
COMMD9-201ENST00000263401 RRP9O43818 475 aaKnown RBP12.16□□□□□ -0.46
COMMD9-201ENST00000263401 SF3A1Q15459 793 aaKnown RBP12.16□□□□□ -0.46
COMMD9-201ENST00000263401 UVSSAQ2YD98 709 aa12.16□□□□□ -0.46
COMMD9-201ENST00000263401 CAVIN4Q5BKX8 364 aa12.16□□□□□ -0.46
COMMD9-201ENST00000263401 SASS6Q6UVJ0 657 aa12.16□□□□□ -0.46
COMMD9-201ENST00000263401 LINC00301Q8NCQ3 95 aa12.16□□□□□ -0.46
COMMD9-201ENST00000263401 RIOK1Q9BRS2 568 aaKnown RBP12.16□□□□□ -0.46
COMMD9-201ENST00000263401 AATFQ9NY61 560 aaKnown RBP eCLIP12.16□□□□□ -0.46
COMMD9-201ENST00000263401 CYP2D6P10635 497 aa12.16□□□□□ -0.46
COMMD9-201ENST00000263401 SCN7AQ01118 1682 aa12.16□□□□□ -0.46
COMMD9-201ENST00000263401 TNRC6CQ9HCJ0 1690 aaKnown RBP12.16□□□□□ -0.46
COMMD9-201ENST00000263401 MROH7-TTC4A0A0A0MT08 1334 aa12.16□□□□□ -0.46
COMMD9-201ENST00000263401 NMT2O60551 498 aa12.15□□□□□ -0.46
COMMD9-201ENST00000263401 IARSP41252 1262 aaKnown RBP12.15□□□□□ -0.46
COMMD9-201ENST00000263401 UBE4AQ14139 1066 aa12.15□□□□□ -0.46
COMMD9-201ENST00000263401 NFIXQ14938 502 aa12.15□□□□□ -0.46
COMMD9-201ENST00000263401 ISM2Q6H9L7 571 aa12.15□□□□□ -0.46
COMMD9-201ENST00000263401 CCDC73Q6ZRK6 1079 aa12.15□□□□□ -0.46
COMMD9-201ENST00000263401 ENGASEQ8NFI3 743 aa12.15□□□□□ -0.46
COMMD9-201ENST00000263401 NACAP1Q9BZK3 213 aa12.15□□□□□ -0.46
COMMD9-201ENST00000263401 RTEL1Q9NZ71 1219 aa12.15□□□□□ -0.46
COMMD9-201ENST00000263401 WDHD1O75717 1129 aaPredicted RBP12.15□□□□□ -0.46
COMMD9-201ENST00000263401 MECOMQ03112 1051 aa12.15□□□□□ -0.46
COMMD9-201ENST00000263401 RBM43Q6ZSC3 357 aaKnown RBP12.15□□□□□ -0.46
COMMD9-201ENST00000263401 TMEM87BQ96K49 555 aa12.15□□□□□ -0.46
COMMD9-201ENST00000263401 PNPLA7Q6ZV29 1317 aa12.15□□□□□ -0.46
COMMD9-201ENST00000263401 WDR19Q8NEZ3 1342 aa12.15□□□□□ -0.46
COMMD9-201ENST00000263401 BIN1O00499 593 aa12.15□□□□□ -0.47
COMMD9-201ENST00000263401 TM4SF1P30408 202 aa12.15□□□□□ -0.47
COMMD9-201ENST00000263401 RFC4P35249 363 aa12.15□□□□□ -0.47
COMMD9-201ENST00000263401 ZNF165P49910 485 aa12.15□□□□□ -0.47
COMMD9-201ENST00000263401 GNL2Q13823 731 aaKnown RBP12.15□□□□□ -0.47
COMMD9-201ENST00000263401 WTAPQ15007 396 aa12.15□□□□□ -0.47
COMMD9-201ENST00000263401 GRIK5Q16478 980 aa12.15□□□□□ -0.47
COMMD9-201ENST00000263401 HS1BP3Q53T59 392 aa12.15□□□□□ -0.47
COMMD9-201ENST00000263401 SPECC1Q5M775 1068 aa12.15□□□□□ -0.47
COMMD9-201ENST00000263401 STAG1Q8WVM7 1258 aa12.15□□□□□ -0.47
COMMD9-201ENST00000263401 CLIC6Q96NY7 704 aa12.15□□□□□ -0.47
COMMD9-201ENST00000263401 GNL3LQ9NVN8 582 aaKnown RBP12.15□□□□□ -0.47
COMMD9-201ENST00000263401 NRBP1Q9UHY1 535 aa12.15□□□□□ -0.47
COMMD9-201ENST00000263401 SPTLC2O15270 562 aa12.14□□□□□ -0.47
COMMD9-201ENST00000263401 KINO60870 393 aaKnown RBP12.14□□□□□ -0.47
COMMD9-201ENST00000263401 ATP2B1P20020 1258 aa12.14□□□□□ -0.47
COMMD9-201ENST00000263401 SYNE3Q6ZMZ3 975 aa12.14□□□□□ -0.47
COMMD9-201ENST00000263401 FAM160A1Q05DH4 1040 aa12.14□□□□□ -0.47
COMMD9-201ENST00000263401 ANO1Q5XXA6 986 aa12.14□□□□□ -0.47
COMMD9-201ENST00000263401 FBXO33Q7Z6M2 555 aa12.14□□□□□ -0.47
COMMD9-201ENST00000263401 SGMS1Q86VZ5 419 aa12.14□□□□□ -0.47
COMMD9-201ENST00000263401 PIBF1Q8WXW3 757 aa12.14□□□□□ -0.47
COMMD9-201ENST00000263401 MRPS27Q92552 414 aaKnown RBP12.14□□□□□ -0.47
COMMD9-201ENST00000263401 KCNF1Q9H3M0 494 aa12.14□□□□□ -0.47
COMMD9-201ENST00000263401 USP17L12C9JPN9 530 aa12.13□□□□□ -0.47
COMMD9-201ENST00000263401 USP17L21D6R901 530 aa12.13□□□□□ -0.47
COMMD9-201ENST00000263401 FAM47AQ5JRC9 791 aa12.13□□□□□ -0.47
COMMD9-201ENST00000263401 SLC10A5Q5PT55 438 aa12.13□□□□□ -0.47
COMMD9-201ENST00000263401 TPTE2Q6XPS3 522 aa12.13□□□□□ -0.47
COMMD9-201ENST00000263401 FMR1NBQ8N0W7 255 aaPredicted RBP12.13□□□□□ -0.47
COMMD9-201ENST00000263401 NSUN4Q96CB9 384 aaKnown RBP12.13□□□□□ -0.47
COMMD9-201ENST00000263401 KRT23Q9C075 422 aa12.13□□□□□ -0.47
COMMD9-201ENST00000263401 R3HCC1Q9Y3T6 440 aaKnown RBP12.13□□□□□ -0.47
COMMD9-201ENST00000263401 TNKSO95271 1327 aa12.13□□□□□ -0.47
COMMD9-201ENST00000263401 AFF2P51816 1311 aa12.13□□□□□ -0.47
COMMD9-201ENST00000263401 BTBD18B2RXH4 712 aa12.13□□□□□ -0.47
COMMD9-201ENST00000263401 HIBADHP31937 336 aaKnown RBP12.13□□□□□ -0.47
COMMD9-201ENST00000263401 NR5A1Q13285 461 aa12.13□□□□□ -0.47
COMMD9-201ENST00000263401 SHISA4Q96DD7 197 aa12.13□□□□□ -0.47
COMMD9-201ENST00000263401 GJD4Q96KN9 370 aaPredicted RBP12.13□□□□□ -0.47
COMMD9-201ENST00000263401 ANKIB1Q9P2G1 1089 aa12.13□□□□□ -0.47
COMMD9-201ENST00000263401 GNAT2P19087 354 aa12.12□□□□□ -0.47
COMMD9-201ENST00000263401 SSRP1Q08945 709 aaKnown RBP12.12□□□□□ -0.47
COMMD9-201ENST00000263401 RTN1Q16799 776 aa12.12□□□□□ -0.47
COMMD9-201ENST00000263401 SEPT12Q8IYM1 358 aa12.12□□□□□ -0.47
COMMD9-201ENST00000263401 ZNF654Q8IZM8 581 aa12.12□□□□□ -0.47
COMMD9-201ENST00000263401 OXER1Q8TDS5 423 aa12.12□□□□□ -0.47
COMMD9-201ENST00000263401 SDF4Q9BRK5 362 aa12.12□□□□□ -0.47
COMMD9-201ENST00000263401 NYXQ9GZU5 481 aa12.12□□□□□ -0.47
COMMD9-201ENST00000263401 CNNM2Q9H8M5 875 aa12.12□□□□□ -0.47
COMMD9-201ENST00000263401 TAF1LQ8IZX4 1826 aa12.12□□□□□ -0.47
COMMD9-201ENST00000263401 TIAM2Q8IVF5 1701 aa12.12□□□□□ -0.47
COMMD9-201ENST00000263401 FAM205CA6NFA0 338 aa12.12□□□□□ -0.47
COMMD9-201ENST00000263401 PTGS1P23219 599 aa12.12□□□□□ -0.47
COMMD9-201ENST00000263401 HSPA1LP34931 641 aa12.12□□□□□ -0.47
COMMD9-201ENST00000263401 LIFRP42702 1097 aa12.12□□□□□ -0.47
COMMD9-201ENST00000263401 RC3H1Q5TC82 1133 aaKnown RBP12.12□□□□□ -0.47
COMMD9-201ENST00000263401 CTR9Q6PD62 1173 aa12.12□□□□□ -0.47
COMMD9-201ENST00000263401 UBAC1Q9BSL1 405 aa12.12□□□□□ -0.47
COMMD9-201ENST00000263401 PYCARDQ9ULZ3 195 aa12.12□□□□□ -0.47
COMMD9-201ENST00000263401 ZNF500O60304 480 aaPredicted RBP12.12□□□□□ -0.47
COMMD9-201ENST00000263401 GRIN1Q05586 938 aa12.12□□□□□ -0.47
COMMD9-201ENST00000263401 DIXDC1Q155Q3 683 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms