RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 MFAP1P55081 439 aaKnown RBP24.8■■□□□ 1.56
RTCA-201ENST00000260563 DEFB129Q9H1M3 183 aa24.8■■□□□ 1.56
RTCA-201ENST00000260563 DDX4Q9NQI0 724 aaKnown RBP24.8■■□□□ 1.56
RTCA-201ENST00000260563 FAM198AQ9UFP1 575 aa24.8■■□□□ 1.56
RTCA-201ENST00000260563 FLT1P17948 1338 aa24.8■■□□□ 1.56
RTCA-201ENST00000260563 RPAP1Q9BWH6 1393 aaPredicted RBP24.79■■□□□ 1.56
RTCA-201ENST00000260563 TCP10Q12799 353 aa24.79■■□□□ 1.56
RTCA-201ENST00000260563 RASA3Q14644 834 aa24.79■■□□□ 1.56
RTCA-201ENST00000260563 CCDC129Q6ZRS4 1044 aa24.79■■□□□ 1.56
RTCA-201ENST00000260563 USP48Q86UV5 1035 aa24.79■■□□□ 1.56
RTCA-201ENST00000260563 RAD50Q92878 1312 aa24.79■■□□□ 1.56
RTCA-201ENST00000260563 COL2A1P02458 1487 aaPredicted RBP24.78■■□□□ 1.56
RTCA-201ENST00000260563 SGSM2O43147 1006 aa24.78■■□□□ 1.56
RTCA-201ENST00000260563 ENTPD3O75355 529 aa24.78■■□□□ 1.56
RTCA-201ENST00000260563 NPM3O75607 178 aaKnown RBP24.78■■□□□ 1.56
RTCA-201ENST00000260563 MAPKAPK5Q8IW41 473 aa24.78■■□□□ 1.56
RTCA-201ENST00000260563 SDR42E1Q8WUS8 393 aa24.78■■□□□ 1.56
RTCA-201ENST00000260563 STRBPQ96SI9 672 aaKnown RBP24.78■■□□□ 1.56
RTCA-201ENST00000260563 SLC4A4Q9Y6R1 1079 aa24.78■■□□□ 1.56
RTCA-201ENST00000260563 GNAT2P19087 354 aa24.77■■□□□ 1.56
RTCA-201ENST00000260563 FAM151AQ8WW52 585 aa24.77■■□□□ 1.56
RTCA-201ENST00000260563 IL25Q9H293 177 aa24.77■■□□□ 1.56
RTCA-201ENST00000260563 SIPA1L1O43166 1804 aa24.77■■□□□ 1.56
RTCA-201ENST00000260563 CCDC171Q6TFL3 1326 aa24.77■■□□□ 1.56
RTCA-201ENST00000260563 ZNF589Q86UQ0 364 aaPredicted RBP24.76■■□□□ 1.55
RTCA-201ENST00000260563 TMEM39BQ9GZU3 492 aa24.76■■□□□ 1.55
RTCA-201ENST00000260563 OSBPL5Q9H0X9 879 aaPredicted RBP24.76■■□□□ 1.55
RTCA-201ENST00000260563 MYH8P13535 1937 aa24.76■■□□□ 1.55
RTCA-201ENST00000260563 PRKAB2O43741 272 aa24.76■■□□□ 1.55
RTCA-201ENST00000260563 REC8O95072 547 aa24.76■■□□□ 1.55
RTCA-201ENST00000260563 UPF2Q9HAU5 1272 aaKnown RBP24.76■■□□□ 1.55
RTCA-201ENST00000260563 FSTL1Q12841 308 aa24.75■■□□□ 1.55
RTCA-201ENST00000260563 DDRGK1Q96HY6 314 aa24.75■■□□□ 1.55
RTCA-201ENST00000260563 ATP8A2Q9NTI2 1148 aa24.75■■□□□ 1.55
RTCA-201ENST00000260563 ZSCAN29Q8IWY8 852 aaPredicted RBP24.74■■□□□ 1.55
RTCA-201ENST00000260563 CDCA5Q96FF9 252 aa24.74■■□□□ 1.55
RTCA-201ENST00000260563 DCP1AQ9NPI6 582 aaPredicted RBP24.74■■□□□ 1.55
RTCA-201ENST00000260563 ATRNL1Q5VV63 1379 aa24.74■■□□□ 1.55
RTCA-201ENST00000260563 LAMA4Q16363 1823 aa24.74■■□□□ 1.55
RTCA-201ENST00000260563 TRAF5O00463 557 aa24.73■■□□□ 1.55
RTCA-201ENST00000260563 ITGBL1O95965 494 aaPredicted RBP24.73■■□□□ 1.55
RTCA-201ENST00000260563 ZFPM1Q8IX07 1006 aa24.73■■□□□ 1.55
RTCA-201ENST00000260563 TSHZ2Q9NRE2 1034 aa24.73■■□□□ 1.55
RTCA-201ENST00000260563 APPP05067 770 aa24.72■■□□□ 1.55
RTCA-201ENST00000260563 PRAMEF18Q5VWM3 479 aa24.72■■□□□ 1.55
RTCA-201ENST00000260563 DLK2Q6UY11 383 aa24.72■■□□□ 1.55
RTCA-201ENST00000260563 TEPSINQ96N21 525 aa24.72■■□□□ 1.55
RTCA-201ENST00000260563 SSC5DA1L4H1 1573 aa24.72■■□□□ 1.55
RTCA-201ENST00000260563 PATL2C9JE40 543 aaKnown RBP24.71■■□□□ 1.55
RTCA-201ENST00000260563 CSRNP1Q96S65 589 aa24.71■■□□□ 1.55
RTCA-201ENST00000260563 DHX36Q9H2U1 1008 aaKnown RBP24.71■■□□□ 1.55
RTCA-201ENST00000260563 ANO2Q9NQ90 1003 aa24.71■■□□□ 1.55
RTCA-201ENST00000260563 MCM9Q9NXL9 1143 aa24.71■■□□□ 1.55
RTCA-201ENST00000260563 MKRN1Q9UHC7 482 aaKnown RBP24.71■■□□□ 1.55
RTCA-201ENST00000260563 SAP30BPQ9UHR5 308 aaKnown RBP24.71■■□□□ 1.55
RTCA-201ENST00000260563 PAPPA2Q9BXP8 1791 aa24.71■■□□□ 1.55
RTCA-201ENST00000260563 PASKQ96RG2 1323 aa24.71■■□□□ 1.55
RTCA-201ENST00000260563 GSG1L2A8MUP6 293 aa24.71■■□□□ 1.55
RTCA-201ENST00000260563 NF2P35240 595 aa24.71■■□□□ 1.55
RTCA-201ENST00000260563 VPS53Q5VIR6 699 aa24.71■■□□□ 1.55
RTCA-201ENST00000260563 GIMAP6Q6P9H5 292 aa24.71■■□□□ 1.55
RTCA-201ENST00000260563 KIAA1211Q6ZU35 1233 aa24.71■■□□□ 1.55
RTCA-201ENST00000260563 CDAN1Q8IWY9 1227 aa24.71■■□□□ 1.55
RTCA-201ENST00000260563 NACAP1Q9BZK3 213 aa24.71■■□□□ 1.55
RTCA-201ENST00000260563 OTOFQ9HC10 1997 aa24.7■■□□□ 1.55
RTCA-201ENST00000260563 DDTLA6NHG4 134 aaPredicted RBP24.7■■□□□ 1.54
RTCA-201ENST00000260563 TDO2P48775 406 aa24.7■■□□□ 1.54
RTCA-201ENST00000260563 SUPT20HL1Q3ZLR7 823 aa24.7■■□□□ 1.54
RTCA-201ENST00000260563 NBPF12Q5TAG4 269 aaPredicted RBP24.7■■□□□ 1.54
RTCA-201ENST00000260563 SH3BP5LQ7L8J4 393 aa24.7■■□□□ 1.54
RTCA-201ENST00000260563 AMOTL1Q8IY63 956 aa24.7■■□□□ 1.54
RTCA-201ENST00000260563 HOOK2Q96ED9 719 aa24.7■■□□□ 1.54
RTCA-201ENST00000260563 ZNF408Q9H9D4 720 aa24.7■■□□□ 1.54
RTCA-201ENST00000260563 EPB41L4AQ9HCS5 686 aaPredicted RBP24.7■■□□□ 1.54
RTCA-201ENST00000260563 PALD1Q9ULE6 856 aa24.7■■□□□ 1.54
RTCA-201ENST00000260563 HLA-DOAP06340 250 aa24.69■■□□□ 1.54
RTCA-201ENST00000260563 HSPD1P10809 573 aaKnown RBP24.69■■□□□ 1.54
RTCA-201ENST00000260563 FMR1Q06787 632 aaKnown RBP eCLIP24.69■■□□□ 1.54
RTCA-201ENST00000260563 SLC4A8Q2Y0W8 1093 aa24.69■■□□□ 1.54
RTCA-201ENST00000260563 IFNL3Q8IZI9 196 aa24.69■■□□□ 1.54
RTCA-201ENST00000260563 USP26Q9BXU7 913 aa24.69■■□□□ 1.54
RTCA-201ENST00000260563 ARPP21Q9UBL0 812 aaPredicted RBP24.69■■□□□ 1.54
RTCA-201ENST00000260563 POLR3DP05423 398 aaPredicted RBP24.68■■□□□ 1.54
RTCA-201ENST00000260563 LSG1Q9H089 658 aaKnown RBP24.68■■□□□ 1.54
RTCA-201ENST00000260563 NAPBQ9H115 298 aa24.68■■□□□ 1.54
RTCA-201ENST00000260563 ATAD5Q96QE3 1844 aa24.67■■□□□ 1.54
RTCA-201ENST00000260563 FOXP2O15409 715 aa24.67■■□□□ 1.54
RTCA-201ENST00000260563 EPB41L2O43491 1005 aaKnown RBP24.67■■□□□ 1.54
RTCA-201ENST00000260563 C22orf23Q9BZE7 217 aa24.67■■□□□ 1.54
RTCA-201ENST00000260563 CELF2O95319 508 aaKnown RBP24.66■■□□□ 1.54
RTCA-201ENST00000260563 TTC6Q86TZ1 520 aa24.66■■□□□ 1.54
RTCA-201ENST00000260563 PI4KBQ9UBF8 816 aa24.66■■□□□ 1.54
RTCA-201ENST00000260563 ZMYM6O95789 1325 aa24.66■■□□□ 1.54
RTCA-201ENST00000260563 DCAF15Q66K64 600 aa24.66■■□□□ 1.54
RTCA-201ENST00000260563 DSCC1Q9BVC3 393 aa24.66■■□□□ 1.54
RTCA-201ENST00000260563 USP17L12C9JPN9 530 aa24.65■■□□□ 1.54
RTCA-201ENST00000260563 USP17L21D6R901 530 aa24.65■■□□□ 1.54
RTCA-201ENST00000260563 PTH1RQ03431 593 aa24.65■■□□□ 1.54
RTCA-201ENST00000260563 CTR9Q6PD62 1173 aa24.65■■□□□ 1.54
RTCA-201ENST00000260563 TBC1D32Q96NH3 1257 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms