RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 NDUFA8P51970 172 aa15.27■□□□□ 0.04
THSD1-201ENST00000258613 SF3A1Q15459 793 aaKnown RBP15.27■□□□□ 0.04
THSD1-201ENST00000258613 ISM2Q6H9L7 571 aa15.27■□□□□ 0.04
THSD1-201ENST00000258613 ZNF804BA4D1E1 1349 aa15.27■□□□□ 0.04
THSD1-201ENST00000258613 CYP2D6P10635 497 aa15.27■□□□□ 0.04
THSD1-201ENST00000258613 TM4SF1P30408 202 aa15.27■□□□□ 0.04
THSD1-201ENST00000258613 RFC4P35249 363 aa15.27■□□□□ 0.04
THSD1-201ENST00000258613 LINC00301Q8NCQ3 95 aa15.27■□□□□ 0.04
THSD1-201ENST00000258613 ZNF396Q96N95 335 aaPredicted RBP15.27■□□□□ 0.04
THSD1-201ENST00000258613 RIOK1Q9BRS2 568 aaKnown RBP15.27■□□□□ 0.04
THSD1-201ENST00000258613 DDX19AQ9NUU7 478 aaKnown RBP15.27■□□□□ 0.04
THSD1-201ENST00000258613 CASZ1Q86V15 1759 aa15.27■□□□□ 0.03
THSD1-201ENST00000258613 CHD4Q14839 1912 aa15.27■□□□□ 0.03
THSD1-201ENST00000258613 MYH13Q9UKX3 1938 aa15.27■□□□□ 0.03
THSD1-201ENST00000258613 MYH15Q9Y2K3 1946 aa15.27■□□□□ 0.03
THSD1-201ENST00000258613 ATP2B1P20020 1258 aa15.27■□□□□ 0.03
THSD1-201ENST00000258613 UBE4AQ14139 1066 aa15.27■□□□□ 0.03
THSD1-201ENST00000258613 ALX1Q15699 326 aa15.27■□□□□ 0.03
THSD1-201ENST00000258613 GRIK5Q16478 980 aa15.27■□□□□ 0.03
THSD1-201ENST00000258613 TPTE2Q6XPS3 522 aa15.27■□□□□ 0.03
THSD1-201ENST00000258613 NACAP1Q9BZK3 213 aa15.27■□□□□ 0.03
THSD1-201ENST00000258613 RTL9Q8NET4 1388 aa15.26■□□□□ 0.03
THSD1-201ENST00000258613 RREB1Q92766 1687 aa15.26■□□□□ 0.03
THSD1-201ENST00000258613 ARAP2Q8WZ64 1704 aa15.26■□□□□ 0.03
THSD1-201ENST00000258613 IARSP41252 1262 aaKnown RBP15.26■□□□□ 0.03
THSD1-201ENST00000258613 MECOMQ03112 1051 aa15.26■□□□□ 0.03
THSD1-201ENST00000258613 SPECC1Q5M775 1068 aa15.26■□□□□ 0.03
THSD1-201ENST00000258613 SASS6Q6UVJ0 657 aa15.26■□□□□ 0.03
THSD1-201ENST00000258613 FAM200AQ8TCP9 573 aa15.26■□□□□ 0.03
THSD1-201ENST00000258613 PIBF1Q8WXW3 757 aa15.26■□□□□ 0.03
THSD1-201ENST00000258613 CCDC39Q9UFE4 941 aa15.26■□□□□ 0.03
THSD1-201ENST00000258613 DOCK2Q92608 1830 aa15.26■□□□□ 0.03
THSD1-201ENST00000258613 WDHD1O75717 1129 aaPredicted RBP15.26■□□□□ 0.03
THSD1-201ENST00000258613 ZNF165P49910 485 aa15.26■□□□□ 0.03
THSD1-201ENST00000258613 GJD4Q96KN9 370 aaPredicted RBP15.26■□□□□ 0.03
THSD1-201ENST00000258613 GNL3LQ9NVN8 582 aaKnown RBP15.26■□□□□ 0.03
THSD1-201ENST00000258613 CICQ96RK0 1608 aaPredicted RBP15.25■□□□□ 0.03
THSD1-201ENST00000258613 USP17L12C9JPN9 530 aa15.25■□□□□ 0.03
THSD1-201ENST00000258613 USP17L21D6R901 530 aa15.25■□□□□ 0.03
THSD1-201ENST00000258613 BIN1O00499 593 aa15.25■□□□□ 0.03
THSD1-201ENST00000258613 CCDC73Q6ZRK6 1079 aa15.25■□□□□ 0.03
THSD1-201ENST00000258613 ENGASEQ8NFI3 743 aa15.25■□□□□ 0.03
THSD1-201ENST00000258613 CLIC6Q96NY7 704 aa15.25■□□□□ 0.03
THSD1-201ENST00000258613 ANKIB1Q9P2G1 1089 aa15.25■□□□□ 0.03
THSD1-201ENST00000258613 HSPA1LP34931 641 aa15.25■□□□□ 0.03
THSD1-201ENST00000258613 GNL2Q13823 731 aaKnown RBP15.25■□□□□ 0.03
THSD1-201ENST00000258613 WTAPQ15007 396 aa15.25■□□□□ 0.03
THSD1-201ENST00000258613 UVSSAQ2YD98 709 aa15.25■□□□□ 0.03
THSD1-201ENST00000258613 SYNE3Q6ZMZ3 975 aa15.25■□□□□ 0.03
THSD1-201ENST00000258613 SEPT12Q8IYM1 358 aa15.25■□□□□ 0.03
THSD1-201ENST00000258613 TMEM87BQ96K49 555 aa15.25■□□□□ 0.03
THSD1-201ENST00000258613 NRBP1Q9UHY1 535 aa15.25■□□□□ 0.03
THSD1-201ENST00000258613 C4AP0C0L4 1744 aa15.25■□□□□ 0.03
THSD1-201ENST00000258613 C4BP0C0L5 1744 aa15.25■□□□□ 0.03
THSD1-201ENST00000258613 BCORQ6W2J9 1755 aa15.24■□□□□ 0.03
THSD1-201ENST00000258613 BTBD18B2RXH4 712 aa15.24■□□□□ 0.03
THSD1-201ENST00000258613 HIBADHP31937 336 aaKnown RBP15.24■□□□□ 0.03
THSD1-201ENST00000258613 FAM47AQ5JRC9 791 aa15.24■□□□□ 0.03
THSD1-201ENST00000258613 SLC10A5Q5PT55 438 aa15.24■□□□□ 0.03
THSD1-201ENST00000258613 RTEL1Q9NZ71 1219 aa15.24■□□□□ 0.03
THSD1-201ENST00000258613 AFF2P51816 1311 aa15.24■□□□□ 0.03
THSD1-201ENST00000258613 PNPLA7Q6ZV29 1317 aa15.24■□□□□ 0.03
THSD1-201ENST00000258613 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.24■□□□□ 0.03
THSD1-201ENST00000258613 SPTLC2O15270 562 aa15.24■□□□□ 0.03
THSD1-201ENST00000258613 TRAPPC3LQ5T215 181 aa15.24■□□□□ 0.03
THSD1-201ENST00000258613 FBXO33Q7Z6M2 555 aa15.24■□□□□ 0.03
THSD1-201ENST00000258613 LAMB2P55268 1798 aa15.24■□□□□ 0.03
THSD1-201ENST00000258613 KINO60870 393 aaKnown RBP15.24■□□□□ 0.03
THSD1-201ENST00000258613 STAG1Q8WVM7 1258 aa15.24■□□□□ 0.03
THSD1-201ENST00000258613 NSUN4Q96CB9 384 aaKnown RBP15.24■□□□□ 0.03
THSD1-201ENST00000258613 SDF4Q9BRK5 362 aa15.24■□□□□ 0.03
THSD1-201ENST00000258613 MROH7-TTC4A0A0A0MT08 1334 aa15.23■□□□□ 0.03
THSD1-201ENST00000258613 NR5A1Q13285 461 aa15.23■□□□□ 0.03
THSD1-201ENST00000258613 DIXDC1Q155Q3 683 aa15.23■□□□□ 0.03
THSD1-201ENST00000258613 ANO1Q5XXA6 986 aa15.23■□□□□ 0.03
THSD1-201ENST00000258613 RBM43Q6ZSC3 357 aaKnown RBP15.23■□□□□ 0.03
THSD1-201ENST00000258613 SGMS1Q86VZ5 419 aa15.23■□□□□ 0.03
THSD1-201ENST00000258613 TNKSO95271 1327 aa15.23■□□□□ 0.03
THSD1-201ENST00000258613 FAM160A1Q05DH4 1040 aa15.23■□□□□ 0.03
THSD1-201ENST00000258613 CACNA1SQ13698 1873 aa15.23■□□□□ 0.03
THSD1-201ENST00000258613 OXER1Q8TDS5 423 aa15.23■□□□□ 0.03
THSD1-201ENST00000258613 KRT23Q9C075 422 aa15.23■□□□□ 0.03
THSD1-201ENST00000258613 FAM205CA6NFA0 338 aa15.22■□□□□ 0.03
THSD1-201ENST00000258613 CTR9Q6PD62 1173 aa15.22■□□□□ 0.03
THSD1-201ENST00000258613 SHISA4Q96DD7 197 aa15.22■□□□□ 0.03
THSD1-201ENST00000258613 UBAC1Q9BSL1 405 aa15.22■□□□□ 0.03
THSD1-201ENST00000258613 MTMR7Q9Y216 660 aa15.22■□□□□ 0.03
THSD1-201ENST00000258613 WDR19Q8NEZ3 1342 aa15.22■□□□□ 0.03
THSD1-201ENST00000258613 GRIN1Q05586 938 aa15.22■□□□□ 0.03
THSD1-201ENST00000258613 RTN1Q16799 776 aa15.22■□□□□ 0.03
THSD1-201ENST00000258613 RC3H1Q5TC82 1133 aaKnown RBP15.22■□□□□ 0.03
THSD1-201ENST00000258613 ZNF654Q8IZM8 581 aa15.22■□□□□ 0.03
THSD1-201ENST00000258613 FMR1NBQ8N0W7 255 aaPredicted RBP15.22■□□□□ 0.03
THSD1-201ENST00000258613 MRPS27Q92552 414 aaKnown RBP15.22■□□□□ 0.03
THSD1-201ENST00000258613 NYXQ9GZU5 481 aa15.22■□□□□ 0.03
THSD1-201ENST00000258613 R3HCC1Q9Y3T6 440 aaKnown RBP15.22■□□□□ 0.03
THSD1-201ENST00000258613 GNAT2P19087 354 aa15.21■□□□□ 0.03
THSD1-201ENST00000258613 LIFRP42702 1097 aa15.21■□□□□ 0.03
THSD1-201ENST00000258613 SSRP1Q08945 709 aaKnown RBP15.21■□□□□ 0.03
THSD1-201ENST00000258613 HS1BP3Q53T59 392 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms