RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 RUSC1Q9BVN2 902 aa6.58□□□□□ -1.36
TCN1-201ENST00000257264 CRISPLD1Q9H336 500 aa6.58□□□□□ -1.36
TCN1-201ENST00000257264 TLR7Q9NYK1 1049 aaKnown RBP6.58□□□□□ -1.36
TCN1-201ENST00000257264 BCCIPQ9P287 314 aaKnown RBP eCLIP6.58□□□□□ -1.36
TCN1-201ENST00000257264 PDZRN3Q9UPQ7 1066 aa6.58□□□□□ -1.36
TCN1-201ENST00000257264 CEP164Q9UPV0 1460 aa6.58□□□□□ -1.36
TCN1-201ENST00000257264 SOGA1O94964 1423 aa6.58□□□□□ -1.36
TCN1-201ENST00000257264 GSG1L2A8MUP6 293 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 MYL1P05976 194 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 CENPBP07199 599 aaPredicted RBP6.57□□□□□ -1.36
TCN1-201ENST00000257264 CTSOP43234 321 aaPredicted RBP6.57□□□□□ -1.36
TCN1-201ENST00000257264 ZNF157P51786 506 aaPredicted RBP6.57□□□□□ -1.36
TCN1-201ENST00000257264 RPL6Q02878 288 aaKnown RBP6.57□□□□□ -1.36
TCN1-201ENST00000257264 MCL1Q07820 350 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 SAFB2Q14151 953 aaKnown RBP eCLIP6.57□□□□□ -1.36
TCN1-201ENST00000257264 RASIP1Q5U651 963 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 PPP4R4Q6NUP7 873 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 LLGL2Q6P1M3 1020 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 LYSMD3Q7Z3D4 306 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 AFAP1L2Q8N4X5 818 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 SAMD3Q8N6K7 520 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 EVI5LQ96CN4 794 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 PNMA5Q96PV4 448 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 ARNT2Q9HBZ2 717 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 KIF21BO75037 1637 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 SHTN1A0MZ66 631 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 UPK3BL1B0FP48 263 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 UPK3BL2E5RIL1 263 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 PLD2O14939 933 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 SH3BP5O60239 455 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 UPP2O95045 317 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 SCGB1D2O95969 90 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 HOXD8P13378 290 aaPredicted RBP6.57□□□□□ -1.36
TCN1-201ENST00000257264 ATF3P18847 181 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 SLC19A1P41440 591 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 PLAURQ03405 335 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 LRRC41Q15345 812 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 FNDC3BQ53EP0 1204 aaKnown RBP6.57□□□□□ -1.36
TCN1-201ENST00000257264 VHLLQ6RSH7 139 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 CHPFQ8IZ52 775 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 MYO1HQ8N1T3 1032 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 MPHOSPH6Q99547 160 aaKnown RBP6.57□□□□□ -1.36
TCN1-201ENST00000257264 ZFATQ9P243 1243 aa6.57□□□□□ -1.36
TCN1-201ENST00000257264 POLR3KQ9Y2Y1 108 aaPredicted RBP6.57□□□□□ -1.36
TCN1-201ENST00000257264 MEIS3P2A8K0S8 358 aa6.56□□□□□ -1.36
TCN1-201ENST00000257264 NFKBIEO00221 500 aa6.56□□□□□ -1.36
TCN1-201ENST00000257264 PDE2AO00408 941 aaPredicted RBP6.56□□□□□ -1.36
TCN1-201ENST00000257264 GRIN3BO60391 1043 aa6.56□□□□□ -1.36
TCN1-201ENST00000257264 PAX3P23760 479 aa6.56□□□□□ -1.36
TCN1-201ENST00000257264 RAB27AP51159 221 aa6.56□□□□□ -1.36
TCN1-201ENST00000257264 BRD3Q15059 726 aa6.56□□□□□ -1.36
TCN1-201ENST00000257264 SLC10A6Q3KNW5 377 aa6.56□□□□□ -1.36
TCN1-201ENST00000257264 SCARA3Q6AZY7 606 aa6.56□□□□□ -1.36
TCN1-201ENST00000257264 DDX46Q7L014 1031 aaKnown RBP6.56□□□□□ -1.36
TCN1-201ENST00000257264 TAB3Q8N5C8 712 aaPredicted RBP6.56□□□□□ -1.36
TCN1-201ENST00000257264 RIN3Q8TB24 985 aa6.56□□□□□ -1.36
TCN1-201ENST00000257264 HHIPQ96QV1 700 aa6.56□□□□□ -1.36
TCN1-201ENST00000257264 EMILIN2Q9BXX0 1053 aa6.56□□□□□ -1.36
TCN1-201ENST00000257264 ANTXR1Q9H6X2 564 aa6.56□□□□□ -1.36
TCN1-201ENST00000257264 NCOA5Q9HCD5 579 aaKnown RBP6.56□□□□□ -1.36
TCN1-201ENST00000257264 BICRAQ9NZM4 1560 aa6.55□□□□□ -1.36
TCN1-201ENST00000257264 DNAJC25-GNG10A0A024R161 153 aa6.55□□□□□ -1.36
TCN1-201ENST00000257264 PPFIA4O75335 1185 aa6.55□□□□□ -1.36
TCN1-201ENST00000257264 KATNA1O75449 491 aa6.55□□□□□ -1.36
TCN1-201ENST00000257264 MAP3K6O95382 1288 aa6.55□□□□□ -1.36
TCN1-201ENST00000257264 RAPGEF3O95398 923 aa6.55□□□□□ -1.36
TCN1-201ENST00000257264 LDHAP00338 332 aaKnown RBP6.55□□□□□ -1.36
TCN1-201ENST00000257264 ARNTP27540 789 aa6.55□□□□□ -1.36
TCN1-201ENST00000257264 NEK2P51955 445 aa6.55□□□□□ -1.36
TCN1-201ENST00000257264 VPS72Q15906 364 aa6.55□□□□□ -1.36
TCN1-201ENST00000257264 LONRF3Q496Y0 759 aa6.55□□□□□ -1.36
TCN1-201ENST00000257264 SULF2Q8IWU5 870 aa6.55□□□□□ -1.36
TCN1-201ENST00000257264 RNF217Q8TC41 542 aa6.55□□□□□ -1.36
TCN1-201ENST00000257264 TMEM40Q8WWA1 233 aa6.55□□□□□ -1.36
TCN1-201ENST00000257264 IPO9Q96P70 1041 aaKnown RBP6.55□□□□□ -1.36
TCN1-201ENST00000257264 ASPSCR1Q9BZE9 553 aa6.55□□□□□ -1.36
TCN1-201ENST00000257264 CLEC4MQ9H2X3 399 aaPredicted RBP6.55□□□□□ -1.36
TCN1-201ENST00000257264 PHAXQ9H814 394 aaKnown RBP6.55□□□□□ -1.36
TCN1-201ENST00000257264 EFCC1Q9HA90 598 aa6.55□□□□□ -1.36
TCN1-201ENST00000257264 CBX8Q9HC52 389 aa6.55□□□□□ -1.36
TCN1-201ENST00000257264 BSDC1Q9NW68 430 aaPredicted RBP6.55□□□□□ -1.36
TCN1-201ENST00000257264 BAZ1BQ9UIG0 1483 aaKnown RBP6.54□□□□□ -1.36
TCN1-201ENST00000257264 AGRPO00253 132 aa6.54□□□□□ -1.36
TCN1-201ENST00000257264 SUSD5O60279 629 aa6.54□□□□□ -1.36
TCN1-201ENST00000257264 NFKB1P19838 968 aa6.54□□□□□ -1.36
TCN1-201ENST00000257264 L1CAMP32004 1257 aa6.54□□□□□ -1.36
TCN1-201ENST00000257264 CCNFP41002 786 aa6.54□□□□□ -1.36
TCN1-201ENST00000257264 SFSWAPQ12872 951 aaKnown RBP6.54□□□□□ -1.36
TCN1-201ENST00000257264 MLECQ14165 292 aa6.54□□□□□ -1.36
TCN1-201ENST00000257264 HSP90AB4PQ58FF6 505 aa6.54□□□□□ -1.36
TCN1-201ENST00000257264 SYCP2LQ5T4T6 812 aa6.54□□□□□ -1.36
TCN1-201ENST00000257264 NECAB2Q7Z6G3 386 aa6.54□□□□□ -1.36
TCN1-201ENST00000257264 C14orf80Q86SX3 495 aa6.54□□□□□ -1.36
TCN1-201ENST00000257264 GAL3ST3Q96A11 431 aa6.54□□□□□ -1.36
TCN1-201ENST00000257264 IL17RAQ96F46 866 aa6.54□□□□□ -1.36
TCN1-201ENST00000257264 CDC6Q99741 560 aa6.54□□□□□ -1.36
TCN1-201ENST00000257264 DHRS4Q9BTZ2 278 aa6.54□□□□□ -1.36
TCN1-201ENST00000257264 TARS2Q9BW92 718 aaKnown RBP6.54□□□□□ -1.36
TCN1-201ENST00000257264 RUBCNLQ9H714 662 aa6.54□□□□□ -1.36
TCN1-201ENST00000257264 GPAMQ9HCL2 828 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms