RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 NEURL4Q96JN8 1562 aa20.78■□□□□ 0.92
PTPN12-201ENST00000248594 MROH7-TTC4A0A0A0MT08 1334 aa20.77■□□□□ 0.92
PTPN12-201ENST00000248594 RNF217Q8TC41 542 aa20.77■□□□□ 0.92
PTPN12-201ENST00000248594 HMG20BQ9P0W2 317 aa20.77■□□□□ 0.92
PTPN12-201ENST00000248594 KIAA1210Q9ULL0 1709 aa20.77■□□□□ 0.92
PTPN12-201ENST00000248594 CCT6AP40227 531 aaKnown RBP20.77■□□□□ 0.92
PTPN12-201ENST00000248594 MYSM1Q5VVJ2 828 aa20.77■□□□□ 0.92
PTPN12-201ENST00000248594 FAM43BQ6ZT52 329 aaPredicted RBP20.77■□□□□ 0.92
PTPN12-201ENST00000248594 CNKSR2Q8WXI2 1034 aa20.77■□□□□ 0.92
PTPN12-201ENST00000248594 ADGRG1Q9Y653 693 aa20.77■□□□□ 0.92
PTPN12-201ENST00000248594 CPS1P31327 1500 aa20.77■□□□□ 0.91
PTPN12-201ENST00000248594 KIF1CO43896 1103 aaKnown RBP20.76■□□□□ 0.91
PTPN12-201ENST00000248594 ELF1P32519 619 aa20.76■□□□□ 0.91
PTPN12-201ENST00000248594 SND1Q7KZF4 910 aaKnown RBP eCLIP20.76■□□□□ 0.913e-9■□□□□ 10.2
PTPN12-201ENST00000248594 FCHSD1Q86WN1 690 aa20.76■□□□□ 0.91
PTPN12-201ENST00000248594 HNRNPLLQ8WVV9 542 aaKnown RBP20.76■□□□□ 0.91
PTPN12-201ENST00000248594 GOLGA6BA6NDN3 693 aa20.76■□□□□ 0.91
PTPN12-201ENST00000248594 CDR1P51861 262 aa20.76■□□□□ 0.91
PTPN12-201ENST00000248594 ANO1Q5XXA6 986 aa20.76■□□□□ 0.91
PTPN12-201ENST00000248594 RTEL1Q9NZ71 1219 aa20.76■□□□□ 0.91
PTPN12-201ENST00000248594 IKBKBO14920 756 aa20.76■□□□□ 0.91
PTPN12-201ENST00000248594 PFKFB2O60825 505 aa20.76■□□□□ 0.91
PTPN12-201ENST00000248594 CDC25AP30304 524 aa20.76■□□□□ 0.91
PTPN12-201ENST00000248594 FMR1Q06787 632 aaKnown RBP eCLIP20.76■□□□□ 0.91
PTPN12-201ENST00000248594 IL17REQ8NFR9 667 aa20.76■□□□□ 0.91
PTPN12-201ENST00000248594 PSMB7Q99436 277 aa20.75■□□□□ 0.91
PTPN12-201ENST00000248594 FER1L4A9Z1Z3 1794 aa20.75■□□□□ 0.91
PTPN12-201ENST00000248594 KCNB2Q92953 911 aa20.75■□□□□ 0.91
PTPN12-201ENST00000248594 DHX32Q7L7V1 743 aaKnown RBP20.75■□□□□ 0.91
PTPN12-201ENST00000248594 ANKRD18AQ8IVF6 992 aa20.75■□□□□ 0.91
PTPN12-201ENST00000248594 SH2D3CQ8N5H7 860 aa20.75■□□□□ 0.91
PTPN12-201ENST00000248594 RAB21Q9UL25 225 aa20.75■□□□□ 0.91
PTPN12-201ENST00000248594 HPCAL4Q9UM19 191 aa20.75■□□□□ 0.91
PTPN12-201ENST00000248594 MAP3K5Q99683 1374 aa20.75■□□□□ 0.91
PTPN12-201ENST00000248594 CDHR2Q9BYE9 1310 aa20.74■□□□□ 0.91
PTPN12-201ENST00000248594 KIF28PB7ZC32 967 aa20.74■□□□□ 0.91
PTPN12-201ENST00000248594 CASP14P31944 242 aa20.74■□□□□ 0.91
PTPN12-201ENST00000248594 NEDD9Q14511 834 aa20.74■□□□□ 0.91
PTPN12-201ENST00000248594 LRRC59Q96AG4 307 aaKnown RBP20.74■□□□□ 0.91
PTPN12-201ENST00000248594 NEUROD6Q96NK8 337 aa20.74■□□□□ 0.91
PTPN12-201ENST00000248594 MYO6Q9UM54 1294 aa20.74■□□□□ 0.91
PTPN12-201ENST00000248594 PPP1R12BO60237 982 aaPredicted RBP20.74■□□□□ 0.91
PTPN12-201ENST00000248594 SASH1O94885 1247 aa20.74■□□□□ 0.91
PTPN12-201ENST00000248594 CPP00450 1065 aa20.74■□□□□ 0.91
PTPN12-201ENST00000248594 PIP4K2BP78356 416 aa20.74■□□□□ 0.91
PTPN12-201ENST00000248594 POTEDQ86YR6 584 aa20.74■□□□□ 0.91
PTPN12-201ENST00000248594 MSANTD4Q8NCY6 345 aa20.74■□□□□ 0.91
PTPN12-201ENST00000248594 GOLGA8BA8MQT2 603 aa20.74■□□□□ 0.91
PTPN12-201ENST00000248594 CCDC102BQ68D86 513 aa20.74■□□□□ 0.91
PTPN12-201ENST00000248594 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.74■□□□□ 0.91
PTPN12-201ENST00000248594 SMARCC2Q8TAQ2 1214 aa20.73■□□□□ 0.91
PTPN12-201ENST00000248594 BPIFA3Q9BQP9 254 aa20.73■□□□□ 0.91
PTPN12-201ENST00000248594 MYL6BP14649 208 aa20.73■□□□□ 0.91
PTPN12-201ENST00000248594 SARNPP82979 210 aaKnown RBP20.73■□□□□ 0.91
PTPN12-201ENST00000248594 MAP3K2Q9Y2U5 619 aa20.73■□□□□ 0.91
PTPN12-201ENST00000248594 SPATA31D1Q6ZQQ2 1576 aa20.73■□□□□ 0.91
PTPN12-201ENST00000248594 USP32Q8NFA0 1604 aa20.73■□□□□ 0.91
PTPN12-201ENST00000248594 ARHGEF28Q8N1W1 1705 aaKnown RBP20.72■□□□□ 0.91
PTPN12-201ENST00000248594 DNA2P51530 1060 aa20.72■□□□□ 0.91
PTPN12-201ENST00000248594 SGSM3Q96HU1 749 aa20.72■□□□□ 0.91
PTPN12-201ENST00000248594 NUP88Q99567 741 aaPredicted RBP20.72■□□□□ 0.91
PTPN12-201ENST00000248594 MYO3AQ8NEV4 1616 aa20.72■□□□□ 0.91
PTPN12-201ENST00000248594 ATP7BP35670 1465 aa20.72■□□□□ 0.91
PTPN12-201ENST00000248594 CARMIL3Q8ND23 1372 aa20.72■□□□□ 0.91
PTPN12-201ENST00000248594 A0A1W2PQ27 194 aa20.72■□□□□ 0.91
PTPN12-201ENST00000248594 A0A1W2PQ64 194 aa20.72■□□□□ 0.91
PTPN12-201ENST00000248594 A0A1W2PQD8 194 aa20.72■□□□□ 0.91
PTPN12-201ENST00000248594 MYBL2P10244 700 aa20.72■□□□□ 0.91
PTPN12-201ENST00000248594 PDIA3P30101 505 aaKnown RBP20.72■□□□□ 0.91
PTPN12-201ENST00000248594 USP5P45974 858 aa20.72■□□□□ 0.91
PTPN12-201ENST00000248594 CEP85LQ5SZL2 805 aa20.72■□□□□ 0.91
PTPN12-201ENST00000248594 FOXP4Q8IVH2 680 aaPredicted RBP20.72■□□□□ 0.91
PTPN12-201ENST00000248594 IFT88Q13099 833 aa20.72■□□□□ 0.91
PTPN12-201ENST00000248594 SMYD4Q8IYR2 804 aaPredicted RBP20.72■□□□□ 0.91
PTPN12-201ENST00000248594 ABTB2Q8N961 1025 aa20.72■□□□□ 0.91
PTPN12-201ENST00000248594 NEXMIFQ5QGS0 1516 aa20.71■□□□□ 0.91
PTPN12-201ENST00000248594 CASP1P29466 404 aa20.71■□□□□ 0.91
PTPN12-201ENST00000248594 GBP2P32456 591 aaPredicted RBP20.71■□□□□ 0.91
PTPN12-201ENST00000248594 AFMP43652 599 aa20.71■□□□□ 0.91
PTPN12-201ENST00000248594 PROSER3Q2NL68 480 aa20.71■□□□□ 0.91
PTPN12-201ENST00000248594 CCDC82Q8N4S0 544 aa20.71■□□□□ 0.91
PTPN12-201ENST00000248594 NOC3LQ8WTT2 800 aaKnown RBP20.71■□□□□ 0.91
PTPN12-201ENST00000248594 TEX13AQ9BXU3 409 aaPredicted RBP20.71■□□□□ 0.91
PTPN12-201ENST00000248594 U3KPZ7 1027 aaPredicted RBP20.71■□□□□ 0.91
PTPN12-201ENST00000248594 KLF18A0A0U1RQI7 1052 aa20.71■□□□□ 0.91
PTPN12-201ENST00000248594 EGFL6Q8IUX8 553 aa20.71■□□□□ 0.91
PTPN12-201ENST00000248594 MMS19Q96T76 1030 aa20.71■□□□□ 0.91
PTPN12-201ENST00000248594 FDPSP14324 419 aaKnown RBP20.71■□□□□ 0.91
PTPN12-201ENST00000248594 ZKSCAN4Q969J2 545 aaPredicted RBP20.71■□□□□ 0.91
PTPN12-201ENST00000248594 SELENOOQ9BVL4 669 aa20.71■□□□□ 0.91
PTPN12-201ENST00000248594 C19orf44Q9H6X5 657 aa20.71■□□□□ 0.91
PTPN12-201ENST00000248594 PPLO60437 1756 aa20.7■□□□□ 0.91
PTPN12-201ENST00000248594 IFT172Q9UG01 1749 aa20.7■□□□□ 0.9
PTPN12-201ENST00000248594 EIF4E1BA6NMX2 242 aaKnown RBP20.7■□□□□ 0.9
PTPN12-201ENST00000248594 CCDC189A1A4V9 331 aa20.7■□□□□ 0.9
PTPN12-201ENST00000248594 GNAT3A8MTJ3 354 aa20.7■□□□□ 0.9
PTPN12-201ENST00000248594 BACH1O14867 736 aa20.7■□□□□ 0.9
PTPN12-201ENST00000248594 SLC7A5Q01650 507 aa20.7■□□□□ 0.9
PTPN12-201ENST00000248594 BEND3Q5T5X7 828 aa20.7■□□□□ 0.9
PTPN12-201ENST00000248594 IQCA1Q86XH1 822 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms