RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 TMEM67Q5HYA8 995 aa21.34■■□□□ 1.01
CHPF-201ENST00000243776 CCDC191Q8NCU4 936 aa21.34■■□□□ 1.01
CHPF-201ENST00000243776 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.34■■□□□ 1.01
CHPF-201ENST00000243776 PIH1D3Q9NQM4 214 aaKnown RBP21.34■■□□□ 1.01
CHPF-201ENST00000243776 SEC31BQ9NQW1 1179 aa21.34■■□□□ 1.01
CHPF-201ENST00000243776 JMYQ8N9B5 988 aa21.33■■□□□ 1.01
CHPF-201ENST00000243776 DHX58Q96C10 678 aa21.33■■□□□ 1.01
CHPF-201ENST00000243776 IRX5P78411 483 aaPredicted RBP21.33■■□□□ 1
CHPF-201ENST00000243776 PPP2R3AQ06190 1150 aa21.33■■□□□ 1
CHPF-201ENST00000243776 MAN1B1Q9UKM7 699 aa21.33■■□□□ 1
CHPF-201ENST00000243776 SH2B2O14492 632 aaPredicted RBP21.32■■□□□ 1
CHPF-201ENST00000243776 ZSCAN12O43309 604 aa21.32■■□□□ 1
CHPF-201ENST00000243776 NR5A1Q13285 461 aa21.32■■□□□ 1
CHPF-201ENST00000243776 CREBRFQ8IUR6 639 aa21.32■■□□□ 1
CHPF-201ENST00000243776 PUF60Q9UHX1 559 aaKnown RBP21.32■■□□□ 1
CHPF-201ENST00000243776 UBN2Q6ZU65 1347 aa21.32■■□□□ 1
CHPF-201ENST00000243776 OAS2P29728 719 aaKnown RBP21.32■■□□□ 1
CHPF-201ENST00000243776 CYP2C19P33261 490 aa21.32■■□□□ 1
CHPF-201ENST00000243776 IFIT5Q13325 482 aaKnown RBP21.32■■□□□ 1
CHPF-201ENST00000243776 TAF3Q5VWG9 929 aa21.32■■□□□ 1
CHPF-201ENST00000243776 LDHAL6AQ6ZMR3 332 aa21.32■■□□□ 1
CHPF-201ENST00000243776 CCDC12Q8WUD4 166 aaPredicted RBP21.32■■□□□ 1
CHPF-201ENST00000243776 WWC3Q9ULE0 1092 aa21.32■■□□□ 1
CHPF-201ENST00000243776 NWD2Q9ULI1 1742 aa21.32■■□□□ 1
CHPF-201ENST00000243776 ZFYP08048 801 aaPredicted RBP21.31■■□□□ 1
CHPF-201ENST00000243776 TC2NQ8N9U0 490 aa21.31■■□□□ 1
CHPF-201ENST00000243776 C19orf44Q9H6X5 657 aa21.31■■□□□ 1
CHPF-201ENST00000243776 ARFGEF2Q9Y6D5 1785 aa21.31■■□□□ 1
CHPF-201ENST00000243776 ZNF532Q9HCE3 1301 aa21.31■■□□□ 1
CHPF-201ENST00000243776 hCG_1642624A0A1W2PR95 340 aa21.31■■□□□ 1
CHPF-201ENST00000243776 SOWAHDA6NJG2 315 aa21.31■■□□□ 1
CHPF-201ENST00000243776 CCP110O43303 1012 aa21.31■■□□□ 1
CHPF-201ENST00000243776 CPLX2Q6PUV4 134 aaKnown RBP21.31■■□□□ 1
CHPF-201ENST00000243776 SMARCE1Q969G3 411 aa21.31■■□□□ 1
CHPF-201ENST00000243776 TMEM51Q9NW97 253 aa21.31■■□□□ 1
CHPF-201ENST00000243776 AKAP2Q9Y2D5 859 aa21.31■■□□□ 1
CHPF-201ENST00000243776 ARHGAP6O43182 974 aa21.31■■□□□ 1
CHPF-201ENST00000243776 TEX33O43247 280 aa21.31■■□□□ 1
CHPF-201ENST00000243776 TBC1D8O95759 1140 aa21.31■■□□□ 1
CHPF-201ENST00000243776 FBXL16Q8N461 479 aa21.31■■□□□ 1
CHPF-201ENST00000243776 PARD6BQ9BYG5 372 aa21.31■■□□□ 1
CHPF-201ENST00000243776 MRPL44Q9H9J2 332 aaKnown RBP21.31■■□□□ 1
CHPF-201ENST00000243776 CNNM1Q9NRU3 951 aa21.31■■□□□ 1
CHPF-201ENST00000243776 FAM217BQ9NTX9 383 aaPredicted RBP21.31■■□□□ 1
CHPF-201ENST00000243776 EFCAB8A8MWE9 144 aa21.3■■□□□ 1
CHPF-201ENST00000243776 IFIT3O14879 490 aaKnown RBP21.3■■□□□ 1
CHPF-201ENST00000243776 PPP6R2O75170 966 aa21.3■■□□□ 1
CHPF-201ENST00000243776 CIAO1O76071 339 aa21.3■■□□□ 1
CHPF-201ENST00000243776 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.3■■□□□ 1
CHPF-201ENST00000243776 AFMP43652 599 aa21.3■■□□□ 1
CHPF-201ENST00000243776 KCNJ6P48051 423 aa21.3■■□□□ 1
CHPF-201ENST00000243776 SMYD4Q8IYR2 804 aaPredicted RBP21.3■■□□□ 1
CHPF-201ENST00000243776 KRI1Q8N9T8 703 aaKnown RBP21.3■■□□□ 1
CHPF-201ENST00000243776 TOB1P50616 345 aaPredicted RBP21.29■■□□□ 1
CHPF-201ENST00000243776 CC2D1AQ6P1N0 951 aaPredicted RBP21.29■■□□□ 1
CHPF-201ENST00000243776 STAMQ92783 540 aa21.29■■□□□ 1
CHPF-201ENST00000243776 MED15Q96RN5 788 aa21.29■■□□□ 1
CHPF-201ENST00000243776 PCDHB6Q9Y5E3 794 aa21.29■■□□□ 1
CHPF-201ENST00000243776 POSTNQ15063 836 aa21.29■■□□□ 1
CHPF-201ENST00000243776 NUP133Q8WUM0 1156 aa21.29■■□□□ 1
CHPF-201ENST00000243776 GREM2Q9H772 168 aa21.29■■□□□ 1
CHPF-201ENST00000243776 ZSWIM5Q9P217 1185 aa21.29■■□□□ 1
CHPF-201ENST00000243776 SLC12A7Q9Y666 1083 aa21.29■■□□□ 1
CHPF-201ENST00000243776 PHKA1P46020 1223 aa21.29■■□□□ 1
CHPF-201ENST00000243776 NTRK3Q16288 839 aa21.29■■□□□ 1
CHPF-201ENST00000243776 DIS3L2Q8IYB7 885 aaKnown RBP21.29■■□□□ 1
CHPF-201ENST00000243776 OXER1Q8TDS5 423 aa21.29■■□□□ 1
CHPF-201ENST00000243776 CPDO75976 1380 aa21.28■■□□□ 1
CHPF-201ENST00000243776 CUTAO60888 179 aa21.28■■□□□ 1
CHPF-201ENST00000243776 SMC1AQ14683 1233 aaKnown RBP21.28■■□□□ 1
CHPF-201ENST00000243776 IGDCC4Q8TDY8 1250 aa21.28■■□□□ 1
CHPF-201ENST00000243776 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.28■■□□□ 1
CHPF-201ENST00000243776 TACC3Q9Y6A5 838 aa21.28■■□□□ 1
CHPF-201ENST00000243776 SCN11AQ9UI33 1791 aa21.28■■□□□ 1
CHPF-201ENST00000243776 CDKL5O76039 1030 aa21.28■■□□□ 1
CHPF-201ENST00000243776 ADD2P35612 726 aa21.28■■□□□ 1
CHPF-201ENST00000243776 SSRP1Q08945 709 aaKnown RBP21.28■■□□□ 1
CHPF-201ENST00000243776 SPECC1LQ69YQ0 1117 aa21.28■■□□□ 1
CHPF-201ENST00000243776 LY9Q9HBG7 655 aa21.28■■□□□ 1
CHPF-201ENST00000243776 FAM205CA6NFA0 338 aa21.27■■□□□ 1
CHPF-201ENST00000243776 PRKAB2O43741 272 aa21.27■■□□□ 1
CHPF-201ENST00000243776 AIDAQ96BJ3 306 aa21.27■■□□□ 1
CHPF-201ENST00000243776 SLIT3O75094 1523 aa21.27■■□□□ 1
CHPF-201ENST00000243776 MAP3K9P80192 1104 aa21.27■■□□□ 1
CHPF-201ENST00000243776 ITGA6P23229 1130 aa21.26■□□□□ 0.99
CHPF-201ENST00000243776 MDM2Q00987 491 aaPredicted RBP21.26■□□□□ 0.99
CHPF-201ENST00000243776 WWC2Q6AWC2 1192 aa21.26■□□□□ 0.99
CHPF-201ENST00000243776 NOSTRINQ8IVI9 506 aa21.26■□□□□ 0.99
CHPF-201ENST00000243776 TEX13AQ9BXU3 409 aaPredicted RBP21.26■□□□□ 0.99
CHPF-201ENST00000243776 ARMT1Q9H993 441 aa21.26■□□□□ 0.99
CHPF-201ENST00000243776 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.26■□□□□ 0.99
CHPF-201ENST00000243776 CALCOCO1Q9P1Z2 691 aa21.26■□□□□ 0.99
CHPF-201ENST00000243776 TOM1L2Q6ZVM7 507 aa21.26■□□□□ 0.99
CHPF-201ENST00000243776 MRFAP1Q9Y605 127 aa21.26■□□□□ 0.99
CHPF-201ENST00000243776 MCM6Q14566 821 aa21.26■□□□□ 0.99
CHPF-201ENST00000243776 SUGCTQ9HAC7 445 aa21.26■□□□□ 0.99
CHPF-201ENST00000243776 KAT6BQ8WYB5 2073 aa21.26■□□□□ 0.99
CHPF-201ENST00000243776 ABL1P00519 1130 aa21.25■□□□□ 0.99
CHPF-201ENST00000243776 PDE6AP16499 860 aa21.25■□□□□ 0.99
CHPF-201ENST00000243776 TBX2Q13207 712 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms