RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 WTAPQ15007 396 aa27.16■■□□□ 1.94
MSX2-201ENST00000239243 RAB11FIP4Q86YS3 637 aa27.16■■□□□ 1.94
MSX2-201ENST00000239243 FBXO18Q8NFZ0 1043 aa27.16■■□□□ 1.94
MSX2-201ENST00000239243 ATP8A2Q9NTI2 1148 aa27.16■■□□□ 1.94
MSX2-201ENST00000239243 NLGN1Q8N2Q7 840 aa27.16■■□□□ 1.94
MSX2-201ENST00000239243 FLAD1Q8NFF5 587 aa27.16■■□□□ 1.94
MSX2-201ENST00000239243 GPSM2P81274 684 aa27.14■■□□□ 1.94
MSX2-201ENST00000239243 UBAC1Q9BSL1 405 aa27.14■■□□□ 1.94
MSX2-201ENST00000239243 GGA1Q9UJY5 639 aa27.14■■□□□ 1.94
MSX2-201ENST00000239243 PPFIA3O75145 1194 aa27.14■■□□□ 1.94
MSX2-201ENST00000239243 LDHBP07195 334 aaKnown RBP27.14■■□□□ 1.94
MSX2-201ENST00000239243 ADD1P35611 737 aaKnown RBP27.14■■□□□ 1.94
MSX2-201ENST00000239243 GSTO1P78417 241 aa27.14■■□□□ 1.94
MSX2-201ENST00000239243 CCDC173Q0VFZ6 552 aa27.14■■□□□ 1.94
MSX2-201ENST00000239243 TPRNQ4KMQ1 711 aa27.14■■□□□ 1.94
MSX2-201ENST00000239243 PODXL2Q9NZ53 605 aa27.14■■□□□ 1.94
MSX2-201ENST00000239243 APBA3O96018 575 aa27.13■■□□□ 1.93
MSX2-201ENST00000239243 GUCY1B3Q02153 619 aa27.13■■□□□ 1.93
MSX2-201ENST00000239243 SENP2Q9HC62 589 aa27.13■■□□□ 1.93
MSX2-201ENST00000239243 AATFQ9NY61 560 aaKnown RBP eCLIP27.13■■□□□ 1.93
MSX2-201ENST00000239243 UFL1O94874 794 aa27.13■■□□□ 1.93
MSX2-201ENST00000239243 BRAPQ7Z569 592 aa27.13■■□□□ 1.93
MSX2-201ENST00000239243 AKT1S1Q96B36 256 aa27.13■■□□□ 1.93
MSX2-201ENST00000239243 EP400Q96L91 3159 aa27.12■■□□□ 1.93
MSX2-201ENST00000239243 STK36Q9NRP7 1315 aa27.12■■□□□ 1.93
MSX2-201ENST00000239243 FGRP09769 529 aa27.12■■□□□ 1.93
MSX2-201ENST00000239243 CDC27P30260 824 aa27.12■■□□□ 1.93
MSX2-201ENST00000239243 CTR9Q6PD62 1173 aa27.12■■□□□ 1.93
MSX2-201ENST00000239243 ARPP21Q9UBL0 812 aaPredicted RBP27.12■■□□□ 1.93
MSX2-201ENST00000239243 RCOR1Q9UKL0 485 aa27.12■■□□□ 1.93
MSX2-201ENST00000239243 BAZ2AQ9UIF9 1905 aaKnown RBP27.11■■□□□ 1.93
MSX2-201ENST00000239243 CCDC196A0A1B0GTZ2 297 aa27.11■■□□□ 1.93
MSX2-201ENST00000239243 SLC3A2P08195 630 aaKnown RBP27.11■■□□□ 1.93
MSX2-201ENST00000239243 IARSP41252 1262 aaKnown RBP27.11■■□□□ 1.93
MSX2-201ENST00000239243 LAMB1P07942 1786 aa27.1■■□□□ 1.93
MSX2-201ENST00000239243 DCP1AQ9NPI6 582 aaPredicted RBP27.1■■□□□ 1.93
MSX2-201ENST00000239243 RXRAP19793 462 aa27.1■■□□□ 1.93
MSX2-201ENST00000239243 PPP2R5BQ15173 497 aa27.1■■□□□ 1.93
MSX2-201ENST00000239243 NTRK3Q16288 839 aa27.1■■□□□ 1.93
MSX2-201ENST00000239243 ZNF827Q17R98 1081 aa27.1■■□□□ 1.93
MSX2-201ENST00000239243 ALG1Q9BT22 464 aa27.1■■□□□ 1.93
MSX2-201ENST00000239243 DDX19AQ9NUU7 478 aaKnown RBP27.1■■□□□ 1.93
MSX2-201ENST00000239243 LRRC37AA6NMS7 1700 aa27.1■■□□□ 1.93
MSX2-201ENST00000239243 NRXN2Q9P2S2 1712 aa27.09■■□□□ 1.93
MSX2-201ENST00000239243 SBK1Q52WX2 424 aa27.09■■□□□ 1.93
MSX2-201ENST00000239243 CERS3Q8IU89 383 aa27.09■■□□□ 1.93
MSX2-201ENST00000239243 WASF1Q92558 559 aa27.09■■□□□ 1.93
MSX2-201ENST00000239243 USP17L12C9JPN9 530 aa27.09■■□□□ 1.93
MSX2-201ENST00000239243 USP17L21D6R901 530 aa27.09■■□□□ 1.93
MSX2-201ENST00000239243 LDHCP07864 332 aa27.09■■□□□ 1.93
MSX2-201ENST00000239243 NT5C2P49902 561 aa27.09■■□□□ 1.93
MSX2-201ENST00000239243 STK11IPQ8N1F8 1099 aa27.09■■□□□ 1.93
MSX2-201ENST00000239243 BICD2Q8TD16 824 aa27.09■■□□□ 1.93
MSX2-201ENST00000239243 ZKSCAN3Q9BRR0 538 aa27.09■■□□□ 1.93
MSX2-201ENST00000239243 CD209Q9NNX6 404 aa27.09■■□□□ 1.93
MSX2-201ENST00000239243 FAM217BQ9NTX9 383 aaPredicted RBP27.09■■□□□ 1.93
MSX2-201ENST00000239243 IL1R1P14778 569 aa27.08■■□□□ 1.93
MSX2-201ENST00000239243 IFNAR1P17181 557 aa27.08■■□□□ 1.93
MSX2-201ENST00000239243 RTN1Q16799 776 aa27.08■■□□□ 1.93
MSX2-201ENST00000239243 IQCA1Q86XH1 822 aa27.08■■□□□ 1.93
MSX2-201ENST00000239243 PPP1R9BQ96SB3 815 aa27.08■■□□□ 1.93
MSX2-201ENST00000239243 NOL10Q9BSC4 688 aaKnown RBP27.08■■□□□ 1.93
MSX2-201ENST00000239243 NUP62CLQ9H1M0 184 aa27.08■■□□□ 1.93
MSX2-201ENST00000239243 JAG2Q9Y219 1238 aa27.08■■□□□ 1.93
MSX2-201ENST00000239243 BAG3O95817 575 aa27.08■■□□□ 1.92
MSX2-201ENST00000239243 SSRP1Q08945 709 aaKnown RBP27.08■■□□□ 1.92
MSX2-201ENST00000239243 ILDR1Q86SU0 546 aaPredicted RBP27.08■■□□□ 1.92
MSX2-201ENST00000239243 CCDC144CPQ8IYA2 1237 aa27.08■■□□□ 1.92
MSX2-201ENST00000239243 PGBD1Q96JS3 809 aa27.08■■□□□ 1.92
MSX2-201ENST00000239243 USP28Q96RU2 1077 aa27.08■■□□□ 1.92
MSX2-201ENST00000239243 MYL10Q9BUA6 226 aa27.08■■□□□ 1.92
MSX2-201ENST00000239243 TNKSO95271 1327 aa27.07■■□□□ 1.92
MSX2-201ENST00000239243 RXRBP28702 533 aa27.07■■□□□ 1.92
MSX2-201ENST00000239243 COL23A1Q86Y22 540 aaPredicted RBP27.07■■□□□ 1.92
MSX2-201ENST00000239243 ORC4O43929 436 aa27.06■■□□□ 1.92
MSX2-201ENST00000239243 LIG1P18858 919 aa27.06■■□□□ 1.92
MSX2-201ENST00000239243 TRIM29Q14134 588 aa27.06■■□□□ 1.92
MSX2-201ENST00000239243 SEC23AQ15436 765 aa27.06■■□□□ 1.92
MSX2-201ENST00000239243 SP8Q8IXZ3 490 aa27.06■■□□□ 1.92
MSX2-201ENST00000239243 ZSCAN10Q96SZ4 725 aaPredicted RBP27.06■■□□□ 1.92
MSX2-201ENST00000239243 PPEF1O14829 653 aaPredicted RBP27.06■■□□□ 1.92
MSX2-201ENST00000239243 FMNL1O95466 1100 aaPredicted RBP27.06■■□□□ 1.92
MSX2-201ENST00000239243 SLC51AQ86UW1 340 aa27.06■■□□□ 1.92
MSX2-201ENST00000239243 TRIM22Q8IYM9 498 aa27.06■■□□□ 1.92
MSX2-201ENST00000239243 ZNF654Q8IZM8 581 aa27.06■■□□□ 1.92
MSX2-201ENST00000239243 TBC1D16Q8TBP0 767 aa27.06■■□□□ 1.92
MSX2-201ENST00000239243 PHKBQ93100 1093 aa27.06■■□□□ 1.92
MSX2-201ENST00000239243 RTEL1Q9NZ71 1219 aa27.06■■□□□ 1.92
MSX2-201ENST00000239243 KIF23Q02241 960 aaPredicted RBP27.05■■□□□ 1.92
MSX2-201ENST00000239243 OTUD7BQ6GQQ9 843 aa27.05■■□□□ 1.92
MSX2-201ENST00000239243 ANKRD31Q8N7Z5 1873 aa27.05■■□□□ 1.92
MSX2-201ENST00000239243 CYP2D7A0A087X1C5 515 aa27.05■■□□□ 1.92
MSX2-201ENST00000239243 RANBP6O60518 1105 aaKnown RBP27.05■■□□□ 1.92
MSX2-201ENST00000239243 CEBPZQ03701 1054 aaKnown RBP27.05■■□□□ 1.92
MSX2-201ENST00000239243 TRIM44Q96DX7 344 aaPredicted RBP27.05■■□□□ 1.92
MSX2-201ENST00000239243 DACT1Q9NYF0 836 aa27.05■■□□□ 1.92
MSX2-201ENST00000239243 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.05■■□□□ 1.92
MSX2-201ENST00000239243 RGPD3A6NKT7 1758 aaPredicted RBP27.04■■□□□ 1.92
MSX2-201ENST00000239243 RGPD4Q7Z3J3 1758 aa27.04■■□□□ 1.92
MSX2-201ENST00000239243 PPP4CP60510 307 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms