RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 C9orf50Q5SZB4 431 aa10.55□□□□□ -0.72
IFT43-201ENST00000238628 LMBR1LQ6UX01 489 aa10.55□□□□□ -0.72
IFT43-201ENST00000238628 LDHAL6AQ6ZMR3 332 aa10.55□□□□□ -0.72
IFT43-201ENST00000238628 HOOK2Q96ED9 719 aa10.55□□□□□ -0.72
IFT43-201ENST00000238628 ZNF594Q96JF6 807 aaPredicted RBP10.55□□□□□ -0.72
IFT43-201ENST00000238628 CNNM1Q9NRU3 951 aa10.55□□□□□ -0.72
IFT43-201ENST00000238628 SERPINA10Q9UK55 444 aa10.55□□□□□ -0.72
IFT43-201ENST00000238628 KCNH4Q9UQ05 1017 aa10.55□□□□□ -0.72
IFT43-201ENST00000238628 LAMA2P24043 3122 aaKnown RBP10.55□□□□□ -0.72
IFT43-201ENST00000238628 MUC6Q6W4X9 2439 aa10.54□□□□□ -0.72
IFT43-201ENST00000238628 COL6A1P12109 1028 aa10.54□□□□□ -0.72
IFT43-201ENST00000238628 HIBADHP31937 336 aaKnown RBP10.54□□□□□ -0.72
IFT43-201ENST00000238628 TRIM32Q13049 653 aa10.54□□□□□ -0.72
IFT43-201ENST00000238628 MOGSQ13724 837 aa10.54□□□□□ -0.72
IFT43-201ENST00000238628 GRIN2CQ14957 1233 aa10.54□□□□□ -0.72
IFT43-201ENST00000238628 CCDC27Q2M243 656 aa10.54□□□□□ -0.72
IFT43-201ENST00000238628 DCAF15Q66K64 600 aa10.54□□□□□ -0.72
IFT43-201ENST00000238628 WWC1Q8IX03 1113 aa10.54□□□□□ -0.72
IFT43-201ENST00000238628 DZIP1LQ8IYY4 767 aaKnown RBP10.54□□□□□ -0.72
IFT43-201ENST00000238628 DOCK3Q8IZD9 2030 aa10.54□□□□□ -0.72
IFT43-201ENST00000238628 TDRD7Q8NHU6 1098 aaKnown RBP10.54□□□□□ -0.72
IFT43-201ENST00000238628 P2RX7Q99572 595 aaKnown RBP10.54□□□□□ -0.72
IFT43-201ENST00000238628 U3KPZ7 1027 aaPredicted RBP10.54□□□□□ -0.72
IFT43-201ENST00000238628 INPP5BP32019 993 aa10.53□□□□□ -0.72
IFT43-201ENST00000238628 GYG1P46976 350 aa10.53□□□□□ -0.72
IFT43-201ENST00000238628 UBE4AQ14139 1066 aa10.53□□□□□ -0.72
IFT43-201ENST00000238628 PDE3AQ14432 1141 aa10.53□□□□□ -0.72
IFT43-201ENST00000238628 TMEM31Q5JXX7 168 aa10.53□□□□□ -0.72
IFT43-201ENST00000238628 EPHA10Q5JZY3 1008 aa10.53□□□□□ -0.72
IFT43-201ENST00000238628 GPAT2Q6NUI2 795 aa10.53□□□□□ -0.72
IFT43-201ENST00000238628 SMCR8Q8TEV9 937 aaPredicted RBP10.53□□□□□ -0.72
IFT43-201ENST00000238628 NECAB3Q96P71 396 aaPredicted RBP10.53□□□□□ -0.72
IFT43-201ENST00000238628 ZNF341Q9BYN7 854 aa10.53□□□□□ -0.72
IFT43-201ENST00000238628 CACNA1AO00555 2505 aa10.52□□□□□ -0.72
IFT43-201ENST00000238628 F6X3S4 739 aa10.52□□□□□ -0.73
IFT43-201ENST00000238628 VAMP4O75379 141 aa10.52□□□□□ -0.73
IFT43-201ENST00000238628 CRKP46108 304 aa10.52□□□□□ -0.73
IFT43-201ENST00000238628 MRE11P49959 708 aa10.52□□□□□ -0.73
IFT43-201ENST00000238628 BEND3Q5T5X7 828 aa10.52□□□□□ -0.73
IFT43-201ENST00000238628 MIGA2Q7L4E1 593 aa10.52□□□□□ -0.73
IFT43-201ENST00000238628 ANKRD13CQ8N6S4 541 aa10.52□□□□□ -0.73
IFT43-201ENST00000238628 FAM84BQ96KN1 310 aaPredicted RBP10.52□□□□□ -0.73
IFT43-201ENST00000238628 EPHX3Q9H6B9 360 aa10.52□□□□□ -0.73
IFT43-201ENST00000238628 C9orf78Q9NZ63 289 aaPredicted RBP10.52□□□□□ -0.73
IFT43-201ENST00000238628 CXCL11O14625 94 aa10.51□□□□□ -0.73
IFT43-201ENST00000238628 CACNB3P54284 484 aa10.51□□□□□ -0.73
IFT43-201ENST00000238628 FASTKD5Q7L8L6 764 aaKnown RBP10.51□□□□□ -0.73
IFT43-201ENST00000238628 GAS2L1Q99501 681 aaPredicted RBP10.51□□□□□ -0.73
IFT43-201ENST00000238628 SENP6Q9GZR1 1112 aaPredicted RBP10.51□□□□□ -0.73
IFT43-201ENST00000238628 IL16Q14005 1332 aa10.51□□□□□ -0.73
IFT43-201ENST00000238628 AK9Q5TCS8 1911 aa10.5□□□□□ -0.73
IFT43-201ENST00000238628 ARAP2Q8WZ64 1704 aa10.5□□□□□ -0.73
IFT43-201ENST00000238628 GRM8O00222 908 aa10.5□□□□□ -0.73
IFT43-201ENST00000238628 PRKAR2AP13861 404 aaKnown RBP10.5□□□□□ -0.73
IFT43-201ENST00000238628 ATN1P54259 1190 aaPredicted RBP10.5□□□□□ -0.73
IFT43-201ENST00000238628 POTEEQ6S8J3 1075 aa10.5□□□□□ -0.73
IFT43-201ENST00000238628 GADL1Q6ZQY3 521 aa10.5□□□□□ -0.73
IFT43-201ENST00000238628 VPS37DQ86XT2 251 aa10.5□□□□□ -0.73
IFT43-201ENST00000238628 PUS3Q9BZE2 481 aaKnown RBP10.5□□□□□ -0.73
IFT43-201ENST00000238628 TMOD2Q9NZR1 351 aa10.5□□□□□ -0.73
IFT43-201ENST00000238628 IQSEC3Q9UPP2 1182 aaPredicted RBP10.5□□□□□ -0.73
IFT43-201ENST00000238628 BDP1A6H8Y1 2624 aa10.5□□□□□ -0.73
IFT43-201ENST00000238628 TCF20Q9UGU0 1960 aaKnown RBP10.49□□□□□ -0.73
IFT43-201ENST00000238628 FRAT2O75474 233 aaPredicted RBP10.49□□□□□ -0.73
IFT43-201ENST00000238628 HDLBPQ00341 1268 aaKnown RBP10.49□□□□□ -0.73
IFT43-201ENST00000238628 EXOSC9Q06265 439 aaKnown RBP10.49□□□□□ -0.73
IFT43-201ENST00000238628 CHAF1AQ13111 956 aaPredicted RBP10.49□□□□□ -0.73
IFT43-201ENST00000238628 CCDC85BQ15834 202 aaPredicted RBP10.49□□□□□ -0.73
IFT43-201ENST00000238628 GRIK5Q16478 980 aa10.49□□□□□ -0.73
IFT43-201ENST00000238628 TBC1D22AQ8WUA7 517 aa10.49□□□□□ -0.73
IFT43-201ENST00000238628 TRIB2Q92519 343 aa10.49□□□□□ -0.73
IFT43-201ENST00000238628 TEKT1Q969V4 418 aa10.49□□□□□ -0.73
IFT43-201ENST00000238628 ZNF576Q9H609 170 aa10.49□□□□□ -0.73
IFT43-201ENST00000238628 FANCIQ9NVI1 1328 aa10.49□□□□□ -0.73
IFT43-201ENST00000238628 MYO9BQ13459 2157 aa10.49□□□□□ -0.73
IFT43-201ENST00000238628 ALDH1L1O75891 902 aa10.48□□□□□ -0.73
IFT43-201ENST00000238628 CYP2B6P20813 491 aa10.48□□□□□ -0.73
IFT43-201ENST00000238628 CCDC184Q52MB2 194 aa10.48□□□□□ -0.73
IFT43-201ENST00000238628 NCBP3Q53F19 620 aaKnown RBP10.48□□□□□ -0.73
IFT43-201ENST00000238628 CAVIN4Q5BKX8 364 aa10.48□□□□□ -0.73
IFT43-201ENST00000238628 AKNAD1Q5T1N1 836 aa10.48□□□□□ -0.73
IFT43-201ENST00000238628 SLC4A10Q6U841 1118 aa10.48□□□□□ -0.73
IFT43-201ENST00000238628 FBXO33Q7Z6M2 555 aa10.48□□□□□ -0.73
IFT43-201ENST00000238628 FAM83AQ86UY5 434 aa10.48□□□□□ -0.73
IFT43-201ENST00000238628 BADQ92934 168 aa10.48□□□□□ -0.73
IFT43-201ENST00000238628 RNPC3Q96LT9 517 aaKnown RBP10.48□□□□□ -0.73
IFT43-201ENST00000238628 MRIQ9BWK5 157 aa10.48□□□□□ -0.73
IFT43-201ENST00000238628 PRDM5Q9NQX1 630 aaPredicted RBP10.48□□□□□ -0.73
IFT43-201ENST00000238628 GJD2Q9UKL4 321 aa10.48□□□□□ -0.73
IFT43-201ENST00000238628 SLC45A1Q9Y2W3 748 aa10.48□□□□□ -0.73
IFT43-201ENST00000238628 SALL2Q9Y467 1007 aaPredicted RBP10.48□□□□□ -0.73
IFT43-201ENST00000238628 CDH23Q9H251 3354 aa10.48□□□□□ -0.73
IFT43-201ENST00000238628 MROH5Q6ZUA9 1318 aa10.48□□□□□ -0.73
IFT43-201ENST00000238628 DNAJB2P25686 324 aa10.47□□□□□ -0.73
IFT43-201ENST00000238628 RTP1P59025 263 aa10.47□□□□□ -0.73
IFT43-201ENST00000238628 FAM110CQ1W6H9 321 aa10.47□□□□□ -0.73
IFT43-201ENST00000238628 MAP3K21Q5TCX8 1036 aa10.47□□□□□ -0.73
IFT43-201ENST00000238628 WDR63Q8IWG1 891 aa10.47□□□□□ -0.73
IFT43-201ENST00000238628 SUCLG2Q96I99 432 aa10.47□□□□□ -0.73
IFT43-201ENST00000238628 ZDHHC15Q96MV8 337 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms