RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 ALG1Q9BT22 464 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 ASIC1P78348 528 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 WAPLQ7Z5K2 1190 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 MSL1Q68DK7 614 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 LMCD1Q9NZU5 365 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 TRPC5Q9UL62 973 aaPredicted RBP8.29□□□□□ -1.08
MED28-201ENST00000237380 PLXNC1O60486 1568 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 EIF3CLB5ME19 914 aaKnown RBP8.29□□□□□ -1.08
MED28-201ENST00000237380 PCP11498 1178 aaKnown RBP8.29□□□□□ -1.08
MED28-201ENST00000237380 SLC12A2P55011 1212 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 EIF3CQ99613 913 aaKnown RBP8.29□□□□□ -1.08
MED28-201ENST00000237380 NUP58Q9BVL2 599 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 LRFN2Q9ULH4 789 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 RPS6KC1Q96S38 1066 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 EXOC6BQ9Y2D4 811 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 ARHGEF35A5YM69 484 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 F8W031 263 aaPredicted RBP8.29□□□□□ -1.08
MED28-201ENST00000237380 USP14P54578 494 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 ELMOD1Q8N336 334 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 ATRIPQ8WXE1 791 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 ASXL1Q8IXJ9 1541 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 ACTN4O43707 911 aaKnown RBP8.29□□□□□ -1.08
MED28-201ENST00000237380 MYO5CQ9NQX4 1742 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 PIK3C2GO75747 1445 aa8.29□□□□□ -1.08
MED28-201ENST00000237380 IRS4O14654 1257 aaPredicted RBP8.28□□□□□ -1.08
MED28-201ENST00000237380 HIBADHP31937 336 aaKnown RBP8.28□□□□□ -1.08
MED28-201ENST00000237380 PPP1R7Q15435 360 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 CC2D2BQ6DHV5 1058 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 DPH6Q7L8W6 267 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 MAATS1Q7Z4T9 603 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 ESYT2A0FGR8 921 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 PDE8AO60658 829 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 GNAT1P11488 350 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 TMEM87BQ96K49 555 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 HELLSQ9NRZ9 838 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 IRX4P78413 519 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 IQUBQ8NA54 791 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 OPTNQ96CV9 577 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 APBA3O96018 575 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 TNNC1P63316 161 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 PPP2R5EQ16537 467 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 CTAGE9A4FU28 777 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 NT5C3AQ9H0P0 336 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 PAG1Q9NWQ8 432 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 N4BP1O75113 896 aaKnown RBP8.28□□□□□ -1.08
MED28-201ENST00000237380 BIRC3Q13489 604 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 TFDP1Q14186 410 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 METTL23Q86XA0 190 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 SYCE1Q8N0S2 351 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 UNC13AQ9UPW8 1703 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 TNNT1P13805 278 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 ACSBG1Q96GR2 724 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 CCDC8Q9H0W5 538 aaPredicted RBP8.28□□□□□ -1.08
MED28-201ENST00000237380 MAP3K5Q99683 1374 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 DDX5P17844 614 aaKnown RBP8.28□□□□□ -1.08
MED28-201ENST00000237380 GOLGA8FQ08AF8 430 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 GOLGA8DPQ0D2H9 430 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 ADALQ6DHV7 355 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 RETREG2Q8NC44 543 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 CDHR1Q96JP9 859 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 C14orf93Q9H972 538 aaKnown RBP8.28□□□□□ -1.08
MED28-201ENST00000237380 PARP2Q9UGN5 583 aa8.28□□□□□ -1.08
MED28-201ENST00000237380 XPAP23025 273 aaPredicted RBP8.27□□□□□ -1.08
MED28-201ENST00000237380 GTF2F1P35269 517 aaKnown RBP eCLIP8.27□□□□□ -1.08
MED28-201ENST00000237380 SETDB1Q15047 1291 aa8.27□□□□□ -1.08
MED28-201ENST00000237380 DNAJC21Q5F1R6 531 aaKnown RBP8.27□□□□□ -1.08
MED28-201ENST00000237380 ASXL2Q76L83 1435 aa8.27□□□□□ -1.08
MED28-201ENST00000237380 PRPSAP1Q14558 356 aa8.27□□□□□ -1.08
MED28-201ENST00000237380 FYB2Q5VWT5 728 aa8.27□□□□□ -1.08
MED28-201ENST00000237380 CNPY4Q8N129 248 aa8.27□□□□□ -1.08
MED28-201ENST00000237380 MPNDQ8N594 471 aa8.27□□□□□ -1.08
MED28-201ENST00000237380 UFL1O94874 794 aa8.27□□□□□ -1.09
MED28-201ENST00000237380 PALM2Q8IXS6 379 aa8.27□□□□□ -1.09
MED28-201ENST00000237380 ARHGAP24Q8N264 748 aa8.27□□□□□ -1.09
MED28-201ENST00000237380 MMRN2Q9H8L6 949 aa8.27□□□□□ -1.09
MED28-201ENST00000237380 ZNF215Q9UL58 517 aaPredicted RBP8.27□□□□□ -1.09
MED28-201ENST00000237380 KRT5P13647 590 aa8.27□□□□□ -1.09
MED28-201ENST00000237380 LMNB1P20700 586 aa8.27□□□□□ -1.09
MED28-201ENST00000237380 SLC9C2Q5TAH2 1124 aa8.27□□□□□ -1.09
MED28-201ENST00000237380 UGGT2Q9NYU1 1516 aa8.27□□□□□ -1.09
MED28-201ENST00000237380 PARD3Q8TEW0 1356 aa8.27□□□□□ -1.09
MED28-201ENST00000237380 RXRBP28702 533 aa8.27□□□□□ -1.09
MED28-201ENST00000237380 SLFN12Q8IYM2 578 aa8.27□□□□□ -1.09
MED28-201ENST00000237380 TMEM57Q8N5G2 664 aa8.27□□□□□ -1.09
MED28-201ENST00000237380 IPO4Q8TEX9 1081 aaKnown RBP8.27□□□□□ -1.09
MED28-201ENST00000237380 LEO1Q8WVC0 666 aaPredicted RBP8.27□□□□□ -1.09
MED28-201ENST00000237380 PBRM1Q86U86 1689 aa8.27□□□□□ -1.09
MED28-201ENST00000237380 ZNF189O75820 626 aaPredicted RBP8.27□□□□□ -1.09
MED28-201ENST00000237380 CIITAP33076 1130 aa8.27□□□□□ -1.09
MED28-201ENST00000237380 NLGN1Q8N2Q7 840 aa8.27□□□□□ -1.09
MED28-201ENST00000237380 EPSTI1Q96J88 318 aa8.27□□□□□ -1.09
MED28-201ENST00000237380 TCOF1Q13428 1488 aaKnown RBP8.27□□□□□ -1.09
MED28-201ENST00000237380 FAM196AQ6ZSG2 479 aa8.27□□□□□ -1.09
MED28-201ENST00000237380 MRPL11Q9Y3B7 192 aaKnown RBP8.27□□□□□ -1.09
MED28-201ENST00000237380 HOXB7P09629 217 aa8.27□□□□□ -1.09
MED28-201ENST00000237380 ADGBQ8N7X0 1667 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 PTPDC1A2A3K4 754 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 WDR46O15213 610 aaKnown RBP8.26□□□□□ -1.09
MED28-201ENST00000237380 PPP2R5DQ14738 602 aa8.26□□□□□ -1.09
MED28-201ENST00000237380 TAF11Q15544 211 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms