RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 RASSF7Q02833 373 aa22■■□□□ 1.11
SNX17-201ENST00000233575 MAPKAPK5Q8IW41 473 aa22■■□□□ 1.11
SNX17-201ENST00000233575 BRF1Q92994 677 aa22■■□□□ 1.11
SNX17-201ENST00000233575 LAMB1P07942 1786 aa22■■□□□ 1.11
SNX17-201ENST00000233575 NAV1Q8NEY1 1877 aa21.99■■□□□ 1.11
SNX17-201ENST00000233575 ST3GAL1Q11201 340 aa21.99■■□□□ 1.11
SNX17-201ENST00000233575 CYB5R4Q7L1T6 521 aa21.99■■□□□ 1.11
SNX17-201ENST00000233575 TEX11Q8IYF3 940 aa21.99■■□□□ 1.11
SNX17-201ENST00000233575 STAG1Q8WVM7 1258 aa21.99■■□□□ 1.11
SNX17-201ENST00000233575 VPS33BQ9H267 617 aa21.99■■□□□ 1.11
SNX17-201ENST00000233575 MCM9Q9NXL9 1143 aa21.99■■□□□ 1.11
SNX17-201ENST00000233575 ANAPC4Q9UJX5 808 aa21.99■■□□□ 1.11
SNX17-201ENST00000233575 PSMD14O00487 310 aa21.99■■□□□ 1.11
SNX17-201ENST00000233575 PRC1O43663 620 aa21.99■■□□□ 1.11
SNX17-201ENST00000233575 DTNBO60941 627 aa21.99■■□□□ 1.11
SNX17-201ENST00000233575 CRKP46108 304 aa21.99■■□□□ 1.11
SNX17-201ENST00000233575 PRELPP51888 382 aa21.99■■□□□ 1.11
SNX17-201ENST00000233575 TRDNQ13061 729 aa21.99■■□□□ 1.11
SNX17-201ENST00000233575 NIM1KQ8IY84 436 aa21.99■■□□□ 1.11
SNX17-201ENST00000233575 TEKT1Q969V4 418 aa21.99■■□□□ 1.11
SNX17-201ENST00000233575 MCM5P33992 734 aa21.98■■□□□ 1.11
SNX17-201ENST00000233575 ANKRD1Q15327 319 aa21.98■■□□□ 1.11
SNX17-201ENST00000233575 APOBEC3HQ6NTF7 200 aaKnown RBP21.98■■□□□ 1.11
SNX17-201ENST00000233575 MFSD6Q6ZSS7 791 aa21.98■■□□□ 1.11
SNX17-201ENST00000233575 NECAB1Q8N987 351 aa21.98■■□□□ 1.11
SNX17-201ENST00000233575 ZNRF3Q9ULT6 936 aa21.98■■□□□ 1.11
SNX17-201ENST00000233575 FGD1P98174 961 aa21.97■■□□□ 1.11
SNX17-201ENST00000233575 RRP12Q5JTH9 1297 aaKnown RBP21.97■■□□□ 1.11
SNX17-201ENST00000233575 HHIPL2Q6UWX4 724 aa21.97■■□□□ 1.11
SNX17-201ENST00000233575 AGXT2Q9BYV1 514 aa21.97■■□□□ 1.11
SNX17-201ENST00000233575 TOMM22Q9NS69 142 aa21.97■■□□□ 1.11
SNX17-201ENST00000233575 ARPP21Q9UBL0 812 aaPredicted RBP21.97■■□□□ 1.11
SNX17-201ENST00000233575 SAP30BPQ9UHR5 308 aaKnown RBP21.97■■□□□ 1.11
SNX17-201ENST00000233575 ZBTB12Q9Y330 459 aaPredicted RBP21.97■■□□□ 1.11
SNX17-201ENST00000233575 FOCADQ5VW36 1801 aa21.96■■□□□ 1.11
SNX17-201ENST00000233575 FLT1P17948 1338 aa21.96■■□□□ 1.11
SNX17-201ENST00000233575 KDM4AO75164 1064 aa21.96■■□□□ 1.11
SNX17-201ENST00000233575 PLCG2P16885 1265 aa21.96■■□□□ 1.11
SNX17-201ENST00000233575 APOBRQ0VD83 1088 aa21.96■■□□□ 1.11
SNX17-201ENST00000233575 CERS3Q8IU89 383 aa21.96■■□□□ 1.11
SNX17-201ENST00000233575 DDX60LQ5H9U9 1706 aaKnown RBP21.96■■□□□ 1.11
SNX17-201ENST00000233575 PRDM1O75626 825 aa21.96■■□□□ 1.11
SNX17-201ENST00000233575 VIL1P09327 827 aaKnown RBP21.96■■□□□ 1.11
SNX17-201ENST00000233575 STK3Q13188 491 aa21.96■■□□□ 1.11
SNX17-201ENST00000233575 SBK1Q52WX2 424 aa21.96■■□□□ 1.11
SNX17-201ENST00000233575 RSBN1LQ6PCB5 846 aaPredicted RBP21.96■■□□□ 1.11
SNX17-201ENST00000233575 CCDC83Q8IWF9 413 aa21.96■■□□□ 1.11
SNX17-201ENST00000233575 ZSCAN31Q96LW9 406 aaPredicted RBP21.96■■□□□ 1.11
SNX17-201ENST00000233575 ZSWIM5Q9P217 1185 aa21.96■■□□□ 1.11
SNX17-201ENST00000233575 CXCL9Q07325 125 aa21.95■■□□□ 1.1
SNX17-201ENST00000233575 CDC42EP5Q6NZY7 148 aa21.95■■□□□ 1.1
SNX17-201ENST00000233575 ZDHHC15Q96MV8 337 aa21.95■■□□□ 1.1
SNX17-201ENST00000233575 USP40Q9NVE5 1235 aa21.95■■□□□ 1.1
SNX17-201ENST00000233575 WDHD1O75717 1129 aaPredicted RBP21.94■■□□□ 1.1
SNX17-201ENST00000233575 RBM5P52756 815 aaKnown RBP eCLIP21.94■■□□□ 1.1
SNX17-201ENST00000233575 C12orf60Q5U649 245 aa21.94■■□□□ 1.1
SNX17-201ENST00000233575 CNNM2Q9H8M5 875 aa21.94■■□□□ 1.1
SNX17-201ENST00000233575 DDX4Q9NQI0 724 aaKnown RBP21.94■■□□□ 1.1
SNX17-201ENST00000233575 SH2B1Q9NRF2 756 aaPredicted RBP21.94■■□□□ 1.1
SNX17-201ENST00000233575 LTBP3Q9NS15 1303 aa21.94■■□□□ 1.1
SNX17-201ENST00000233575 ECM29Q5VYK3 1845 aa21.94■■□□□ 1.1
SNX17-201ENST00000233575 PLCD1P51178 756 aa21.94■■□□□ 1.1
SNX17-201ENST00000233575 PICALMQ13492 652 aa21.94■■□□□ 1.1
SNX17-201ENST00000233575 JDP2Q8WYK2 163 aa21.94■■□□□ 1.1
SNX17-201ENST00000233575 GMLQ99445 158 aa21.94■■□□□ 1.1
SNX17-201ENST00000233575 SYT17Q9BSW7 474 aa21.94■■□□□ 1.1
SNX17-201ENST00000233575 KRT23Q9C075 422 aa21.94■■□□□ 1.1
SNX17-201ENST00000233575 RNF41Q9H4P4 317 aaPredicted RBP21.94■■□□□ 1.1
SNX17-201ENST00000233575 MYH1P12882 1939 aa21.93■■□□□ 1.1
SNX17-201ENST00000233575 FBXL16Q8N461 479 aa21.93■■□□□ 1.1
SNX17-201ENST00000233575 DYNLL2Q96FJ2 89 aa21.93■■□□□ 1.1
SNX17-201ENST00000233575 INTS4Q96HW7 963 aaKnown RBP21.93■■□□□ 1.1
SNX17-201ENST00000233575 MRIQ9BWK5 157 aa21.93■■□□□ 1.1
SNX17-201ENST00000233575 SENP2Q9HC62 589 aa21.93■■□□□ 1.1
SNX17-201ENST00000233575 HDLBPQ00341 1268 aaKnown RBP21.92■■□□□ 1.1
SNX17-201ENST00000233575 ZKSCAN3Q9BRR0 538 aa21.92■■□□□ 1.1
SNX17-201ENST00000233575 SERPINA10Q9UK55 444 aa21.92■■□□□ 1.1
SNX17-201ENST00000233575 WDR19Q8NEZ3 1342 aa21.92■■□□□ 1.1
SNX17-201ENST00000233575 FGRP09769 529 aa21.92■■□□□ 1.1
SNX17-201ENST00000233575 CACNB3P54284 484 aa21.92■■□□□ 1.1
SNX17-201ENST00000233575 CHMP5Q9NZZ3 219 aa21.92■■□□□ 1.1
SNX17-201ENST00000233575 BRPF3Q9ULD4 1205 aa21.92■■□□□ 1.1
SNX17-201ENST00000233575 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.92■■□□□ 1.1
SNX17-201ENST00000233575 NFIAQ12857 509 aa21.91■■□□□ 1.1
SNX17-201ENST00000233575 MYO3BQ8WXR4 1341 aa21.91■■□□□ 1.1
SNX17-201ENST00000233575 SH2B2O14492 632 aaPredicted RBP21.9■■□□□ 1.1
SNX17-201ENST00000233575 POLR3DP05423 398 aaPredicted RBP21.9■■□□□ 1.1
SNX17-201ENST00000233575 PKP1Q13835 747 aa21.9■■□□□ 1.1
SNX17-201ENST00000233575 CFAP100Q494V2 611 aa21.9■■□□□ 1.1
SNX17-201ENST00000233575 IGDCC4Q8TDY8 1250 aa21.9■■□□□ 1.1
SNX17-201ENST00000233575 RAB11FIP4Q86YS3 637 aa21.9■■□□□ 1.1
SNX17-201ENST00000233575 SLC44A5Q8NCS7 719 aa21.9■■□□□ 1.1
SNX17-201ENST00000233575 PRMT6Q96LA8 375 aaPredicted RBP21.9■■□□□ 1.1
SNX17-201ENST00000233575 NAP1L2Q9ULW6 460 aaPredicted RBP21.9■■□□□ 1.1
SNX17-201ENST00000233575 SCRN1Q12765 414 aa21.89■■□□□ 1.1
SNX17-201ENST00000233575 CIAPIN1Q6FI81 312 aa21.89■■□□□ 1.1
SNX17-201ENST00000233575 GTF3C6Q969F1 213 aa21.89■■□□□ 1.1
SNX17-201ENST00000233575 ANGEL1Q9UNK9 670 aaKnown RBP21.89■■□□□ 1.1
SNX17-201ENST00000233575 ROBO3Q96MS0 1386 aa21.89■■□□□ 1.09
SNX17-201ENST00000233575 RANBP6O60518 1105 aaKnown RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms