RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 PICALMQ13492 652 aa19.69■□□□□ 0.74
CHMP5-201ENST00000223500 TBC1D10BQ4KMP7 808 aaPredicted RBP19.69■□□□□ 0.74
CHMP5-201ENST00000223500 SBK1Q52WX2 424 aa19.69■□□□□ 0.74
CHMP5-201ENST00000223500 L3MBTL3Q96JM7 780 aaPredicted RBP19.69■□□□□ 0.74
CHMP5-201ENST00000223500 ZNF70Q9UC06 446 aaPredicted RBP19.69■□□□□ 0.74
CHMP5-201ENST00000223500 MKRN1Q9UHC7 482 aaKnown RBP19.69■□□□□ 0.74
CHMP5-201ENST00000223500 MINDY4BA8MYZ0 360 aa19.68■□□□□ 0.74
CHMP5-201ENST00000223500 USP17L12C9JPN9 530 aa19.68■□□□□ 0.74
CHMP5-201ENST00000223500 USP17L21D6R901 530 aa19.68■□□□□ 0.74
CHMP5-201ENST00000223500 POLR3DP05423 398 aaPredicted RBP19.68■□□□□ 0.74
CHMP5-201ENST00000223500 HAND2P61296 217 aa19.68■□□□□ 0.74
CHMP5-201ENST00000223500 TSGA10IPQ3SY00 556 aa19.68■□□□□ 0.74
CHMP5-201ENST00000223500 SPDYE2Q495Y8 402 aa19.68■□□□□ 0.74
CHMP5-201ENST00000223500 FKBP1CQ5VVH2 108 aa19.68■□□□□ 0.74
CHMP5-201ENST00000223500 SAMD7Q7Z3H4 446 aa19.68■□□□□ 0.74
CHMP5-201ENST00000223500 PALD1Q9ULE6 856 aa19.68■□□□□ 0.74
CHMP5-201ENST00000223500 SNX14Q9Y5W7 946 aa19.68■□□□□ 0.74
CHMP5-201ENST00000223500 SLC3A2P08195 630 aaKnown RBP19.67■□□□□ 0.74
CHMP5-201ENST00000223500 EPS15P42566 896 aa19.67■□□□□ 0.74
CHMP5-201ENST00000223500 CTR9Q6PD62 1173 aa19.67■□□□□ 0.74
CHMP5-201ENST00000223500 RASEFQ8IZ41 740 aa19.67■□□□□ 0.74
CHMP5-201ENST00000223500 ADARB2Q9NS39 739 aaKnown RBP19.67■□□□□ 0.74
CHMP5-201ENST00000223500 CLRN2A0PK11 232 aa19.67■□□□□ 0.74
CHMP5-201ENST00000223500 ENTPD3O75355 529 aa19.67■□□□□ 0.74
CHMP5-201ENST00000223500 PPARAQ07869 468 aa19.67■□□□□ 0.74
CHMP5-201ENST00000223500 NBPF9Q3BBW0 867 aa19.67■□□□□ 0.74
CHMP5-201ENST00000223500 OSBPL5Q9H0X9 879 aaPredicted RBP19.67■□□□□ 0.74
CHMP5-201ENST00000223500 VEZTQ9HBM0 779 aa19.67■□□□□ 0.74
CHMP5-201ENST00000223500 ANAPC4Q9UJX5 808 aa19.67■□□□□ 0.74
CHMP5-201ENST00000223500 LAMB1P07942 1786 aa19.66■□□□□ 0.74
CHMP5-201ENST00000223500 PSMA5P28066 241 aa19.66■□□□□ 0.74
CHMP5-201ENST00000223500 TNNI2P48788 182 aa19.66■□□□□ 0.74
CHMP5-201ENST00000223500 CACNB3P54284 484 aa19.66■□□□□ 0.74
CHMP5-201ENST00000223500 NFIAQ12857 509 aa19.66■□□□□ 0.74
CHMP5-201ENST00000223500 TTC6Q86TZ1 520 aa19.66■□□□□ 0.74
CHMP5-201ENST00000223500 IL17RAQ96F46 866 aa19.66■□□□□ 0.74
CHMP5-201ENST00000223500 RNF41Q9H4P4 317 aaPredicted RBP19.66■□□□□ 0.74
CHMP5-201ENST00000223500 DDX4Q9NQI0 724 aaKnown RBP19.66■□□□□ 0.74
CHMP5-201ENST00000223500 SAP30BPQ9UHR5 308 aaKnown RBP19.66■□□□□ 0.74
CHMP5-201ENST00000223500 HACL1Q9UJ83 578 aa19.66■□□□□ 0.74
CHMP5-201ENST00000223500 SCN4AP35499 1836 aa19.65■□□□□ 0.74
CHMP5-201ENST00000223500 IQCA1LA6NCM1 817 aa19.65■□□□□ 0.74
CHMP5-201ENST00000223500 EGFRP00533 1210 aa19.65■□□□□ 0.74
CHMP5-201ENST00000223500 TRDNQ13061 729 aa19.65■□□□□ 0.74
CHMP5-201ENST00000223500 TNFAIP1Q13829 316 aa19.65■□□□□ 0.74
CHMP5-201ENST00000223500 RABEP1Q15276 862 aa19.65■□□□□ 0.74
CHMP5-201ENST00000223500 C12orf60Q5U649 245 aa19.65■□□□□ 0.74
CHMP5-201ENST00000223500 DHX36Q9H2U1 1008 aaKnown RBP19.65■□□□□ 0.74
CHMP5-201ENST00000223500 FAM198AQ9UFP1 575 aa19.65■□□□□ 0.74
CHMP5-201ENST00000223500 TCP10L2B9ZVM9 353 aa19.64■□□□□ 0.73
CHMP5-201ENST00000223500 E7EWF7 191 aa19.64■□□□□ 0.73
CHMP5-201ENST00000223500 HLA-DOAP06340 250 aa19.64■□□□□ 0.73
CHMP5-201ENST00000223500 TCP10Q12799 353 aa19.64■□□□□ 0.73
CHMP5-201ENST00000223500 FAM83AQ86UY5 434 aa19.64■□□□□ 0.73
CHMP5-201ENST00000223500 JAKMIP1Q96N16 626 aaKnown RBP19.64■□□□□ 0.73
CHMP5-201ENST00000223500 TM6SF1Q9BZW5 370 aa19.64■□□□□ 0.73
CHMP5-201ENST00000223500 DDX60LQ5H9U9 1706 aaKnown RBP19.63■□□□□ 0.73
CHMP5-201ENST00000223500 CYP2D7A0A087X1C5 515 aa19.63■□□□□ 0.73
CHMP5-201ENST00000223500 PCP11498 1178 aaKnown RBP19.63■□□□□ 0.73
CHMP5-201ENST00000223500 CTDSPL2Q05D32 466 aa19.63■□□□□ 0.73
CHMP5-201ENST00000223500 AKNAD1Q5T1N1 836 aa19.63■□□□□ 0.73
CHMP5-201ENST00000223500 MFSD6Q6ZSS7 791 aa19.63■□□□□ 0.73
CHMP5-201ENST00000223500 ZSCAN29Q8IWY8 852 aaPredicted RBP19.63■□□□□ 0.73
CHMP5-201ENST00000223500 IL27Q8NEV9 243 aa19.63■□□□□ 0.73
CHMP5-201ENST00000223500 TRPM4Q8TD43 1214 aa19.63■□□□□ 0.73
CHMP5-201ENST00000223500 FAM151AQ8WW52 585 aa19.63■□□□□ 0.73
CHMP5-201ENST00000223500 KIF2CQ99661 725 aa19.63■□□□□ 0.73
CHMP5-201ENST00000223500 HMGB1P09429 215 aaKnown RBP19.62■□□□□ 0.73
CHMP5-201ENST00000223500 CYP2D6P10635 497 aa19.62■□□□□ 0.73
CHMP5-201ENST00000223500 PDE4BQ07343 736 aa19.62■□□□□ 0.73
CHMP5-201ENST00000223500 USP50Q70EL3 339 aaPredicted RBP19.62■□□□□ 0.73
CHMP5-201ENST00000223500 RALYLQ86SE5 291 aaKnown RBP19.62■□□□□ 0.73
CHMP5-201ENST00000223500 APOBEC3FQ8IUX4 373 aaKnown RBP19.62■□□□□ 0.73
CHMP5-201ENST00000223500 STAG1Q8WVM7 1258 aa19.62■□□□□ 0.73
CHMP5-201ENST00000223500 NEK1Q96PY6 1258 aa19.62■□□□□ 0.73
CHMP5-201ENST00000223500 CNNM2Q9H8M5 875 aa19.62■□□□□ 0.73
CHMP5-201ENST00000223500 ZNF287Q9HBT7 754 aa19.62■□□□□ 0.73
CHMP5-201ENST00000223500 RBM19Q9Y4C8 960 aaKnown RBP19.62■□□□□ 0.73
CHMP5-201ENST00000223500 WDR90Q96KV7 1748 aa19.61■□□□□ 0.73
CHMP5-201ENST00000223500 COL2A1P02458 1487 aaPredicted RBP19.61■□□□□ 0.73
CHMP5-201ENST00000223500 EPHX2P34913 555 aa19.61■□□□□ 0.73
CHMP5-201ENST00000223500 ADCK5Q3MIX3 580 aa19.61■□□□□ 0.73
CHMP5-201ENST00000223500 BLOC1S2Q6QNY1 142 aa19.61■□□□□ 0.73
CHMP5-201ENST00000223500 TBC1D10CQ8IV04 446 aa19.61■□□□□ 0.73
CHMP5-201ENST00000223500 NCOA7Q8NI08 942 aa19.61■□□□□ 0.73
CHMP5-201ENST00000223500 KRT23Q9C075 422 aa19.61■□□□□ 0.73
CHMP5-201ENST00000223500 CYP46A1Q9Y6A2 500 aa19.61■□□□□ 0.73
CHMP5-201ENST00000223500 TAF6LQ9Y6J9 622 aa19.61■□□□□ 0.73
CHMP5-201ENST00000223500 CASTP20810 708 aaKnown RBP19.6■□□□□ 0.73
CHMP5-201ENST00000223500 NT5C2P49902 561 aa19.6■□□□□ 0.73
CHMP5-201ENST00000223500 PLCD1P51178 756 aa19.6■□□□□ 0.73
CHMP5-201ENST00000223500 SLC4A8Q2Y0W8 1093 aa19.6■□□□□ 0.73
CHMP5-201ENST00000223500 STOX1Q6ZVD7 989 aa19.6■□□□□ 0.73
CHMP5-201ENST00000223500 NBPF3Q9H094 633 aa19.6■□□□□ 0.73
CHMP5-201ENST00000223500 TOMM22Q9NS69 142 aa19.6■□□□□ 0.73
CHMP5-201ENST00000223500 PI4KBQ9UBF8 816 aa19.6■□□□□ 0.73
CHMP5-201ENST00000223500 TAOK2Q9UL54 1235 aa19.6■□□□□ 0.73
CHMP5-201ENST00000223500 ROBO3Q96MS0 1386 aa19.6■□□□□ 0.73
CHMP5-201ENST00000223500 HIRAP54198 1017 aaPredicted RBP19.6■□□□□ 0.73
CHMP5-201ENST00000223500 ANGEL2Q5VTE6 544 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms