RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 V9GYY5 206 aaPredicted RBP18.35■□□□□ 0.53
SF3A2-201ENST00000221494 NUP98P52948 1817 aa18.35■□□□□ 0.53
SF3A2-201ENST00000221494 BRWD3Q6RI45 1802 aa18.35■□□□□ 0.53
SF3A2-201ENST00000221494 LY75O60449 1722 aa18.35■□□□□ 0.53
SF3A2-201ENST00000221494 FAM237AA0A1B0GTK4 181 aa18.35■□□□□ 0.53
SF3A2-201ENST00000221494 PDE8AO60658 829 aa18.35■□□□□ 0.53
SF3A2-201ENST00000221494 CTSWP56202 376 aa18.35■□□□□ 0.53
SF3A2-201ENST00000221494 CCDC57Q2TAC2 916 aa18.35■□□□□ 0.53
SF3A2-201ENST00000221494 ARHGAP29Q52LW3 1261 aa18.35■□□□□ 0.53
SF3A2-201ENST00000221494 CCDC129Q6ZRS4 1044 aa18.35■□□□□ 0.53
SF3A2-201ENST00000221494 ELOA2Q8IYF1 753 aaPredicted RBP18.35■□□□□ 0.53
SF3A2-201ENST00000221494 TUBE1Q9UJT0 475 aa18.35■□□□□ 0.53
SF3A2-201ENST00000221494 EYA2O00167 538 aa18.34■□□□□ 0.53
SF3A2-201ENST00000221494 TULP2O00295 520 aa18.34■□□□□ 0.53
SF3A2-201ENST00000221494 TADA3O75528 432 aa18.34■□□□□ 0.53
SF3A2-201ENST00000221494 NTSR2O95665 410 aa18.34■□□□□ 0.53
SF3A2-201ENST00000221494 FANCCQ00597 558 aa18.34■□□□□ 0.53
SF3A2-201ENST00000221494 SLC27A3Q5K4L6 730 aa18.34■□□□□ 0.53
SF3A2-201ENST00000221494 ARHGEF1Q92888 912 aaKnown RBP18.34■□□□□ 0.53
SF3A2-201ENST00000221494 AK7Q96M32 723 aa18.34■□□□□ 0.53
SF3A2-201ENST00000221494 CCDC85AQ96PX6 553 aaPredicted RBP18.34■□□□□ 0.53
SF3A2-201ENST00000221494 DNAJC2Q99543 621 aaKnown RBP18.34■□□□□ 0.53
SF3A2-201ENST00000221494 DBNDD2Q9BQY9 259 aa18.34■□□□□ 0.53
SF3A2-201ENST00000221494 UBXN6Q9BZV1 441 aa18.34■□□□□ 0.53
SF3A2-201ENST00000221494 C4AP0C0L4 1744 aa18.34■□□□□ 0.53
SF3A2-201ENST00000221494 C4BP0C0L5 1744 aa18.34■□□□□ 0.53
SF3A2-201ENST00000221494 ANKRD36CQ5JPF3 1778 aa18.34■□□□□ 0.53
SF3A2-201ENST00000221494 CIAO1O76071 339 aa18.33■□□□□ 0.53
SF3A2-201ENST00000221494 LRRC24Q50LG9 513 aa18.33■□□□□ 0.53
SF3A2-201ENST00000221494 MYSM1Q5VVJ2 828 aa18.33■□□□□ 0.53
SF3A2-201ENST00000221494 HOMER1Q86YM7 354 aa18.33■□□□□ 0.53
SF3A2-201ENST00000221494 MNS1Q8NEH6 495 aa18.33■□□□□ 0.53
SF3A2-201ENST00000221494 FBXO18Q8NFZ0 1043 aa18.33■□□□□ 0.53
SF3A2-201ENST00000221494 C8orf76Q96K31 380 aa18.33■□□□□ 0.53
SF3A2-201ENST00000221494 GREM2Q9H772 168 aa18.33■□□□□ 0.53
SF3A2-201ENST00000221494 PAG1Q9NWQ8 432 aa18.33■□□□□ 0.53
SF3A2-201ENST00000221494 SRP68Q9UHB9 627 aaKnown RBP18.33■□□□□ 0.53
SF3A2-201ENST00000221494 A0A1B0GVL5 298 aa18.33■□□□□ 0.52
SF3A2-201ENST00000221494 ZNF202O95125 648 aa18.33■□□□□ 0.52
SF3A2-201ENST00000221494 FDPSP14324 419 aaKnown RBP18.33■□□□□ 0.52
SF3A2-201ENST00000221494 IL15P40933 162 aaPredicted RBP18.33■□□□□ 0.52
SF3A2-201ENST00000221494 IFIT5Q13325 482 aaKnown RBP18.33■□□□□ 0.52
SF3A2-201ENST00000221494 PROM2Q8N271 834 aa18.33■□□□□ 0.52
SF3A2-201ENST00000221494 TXLNBQ8N3L3 684 aa18.33■□□□□ 0.52
SF3A2-201ENST00000221494 JMYQ8N9B5 988 aa18.33■□□□□ 0.52
SF3A2-201ENST00000221494 SEC62Q99442 399 aaKnown RBP18.33■□□□□ 0.52
SF3A2-201ENST00000221494 HSPD1P10809 573 aaKnown RBP18.32■□□□□ 0.52
SF3A2-201ENST00000221494 JAKMIP3Q5VZ66 844 aa18.32■□□□□ 0.52
SF3A2-201ENST00000221494 TRIM65Q6PJ69 517 aa18.32■□□□□ 0.52
SF3A2-201ENST00000221494 POTEAQ6S8J7 498 aa18.32■□□□□ 0.52
SF3A2-201ENST00000221494 LRRC2Q9BYS8 371 aa18.32■□□□□ 0.52
SF3A2-201ENST00000221494 PUS3Q9BZE2 481 aaKnown RBP18.32■□□□□ 0.52
SF3A2-201ENST00000221494 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.32■□□□□ 0.52
SF3A2-201ENST00000221494 ARHGAP6O43182 974 aa18.31■□□□□ 0.52
SF3A2-201ENST00000221494 PPP6R2O75170 966 aa18.31■□□□□ 0.52
SF3A2-201ENST00000221494 PLA2G4AP47712 749 aa18.31■□□□□ 0.52
SF3A2-201ENST00000221494 CCT2P78371 535 aaKnown RBP18.31■□□□□ 0.52
SF3A2-201ENST00000221494 MYL5Q02045 173 aa18.31■□□□□ 0.52
SF3A2-201ENST00000221494 MUM1L1Q5H9M0 696 aa18.31■□□□□ 0.52
SF3A2-201ENST00000221494 ANO1Q5XXA6 986 aa18.31■□□□□ 0.52
SF3A2-201ENST00000221494 SYNE3Q6ZMZ3 975 aa18.31■□□□□ 0.52
SF3A2-201ENST00000221494 ZPR1O75312 459 aa18.31■□□□□ 0.52
SF3A2-201ENST00000221494 ITGA6P23229 1130 aa18.31■□□□□ 0.52
SF3A2-201ENST00000221494 AXDND1Q5T1B0 1012 aaPredicted RBP18.31■□□□□ 0.52
SF3A2-201ENST00000221494 TBC1D9BQ66K14 1250 aa18.31■□□□□ 0.52
SF3A2-201ENST00000221494 DDX46Q7L014 1031 aaKnown RBP18.31■□□□□ 0.52
SF3A2-201ENST00000221494 GPR161Q8N6U8 529 aaKnown RBP18.31■□□□□ 0.52
SF3A2-201ENST00000221494 ABCC12Q96J65 1359 aa18.31■□□□□ 0.52
SF3A2-201ENST00000221494 RNF113AO15541 343 aaKnown RBP18.3■□□□□ 0.52
SF3A2-201ENST00000221494 GPS2Q13227 327 aa18.3■□□□□ 0.52
SF3A2-201ENST00000221494 TRAPPC3LQ5T215 181 aa18.3■□□□□ 0.52
SF3A2-201ENST00000221494 VSTM4Q8IW00 320 aa18.3■□□□□ 0.52
SF3A2-201ENST00000221494 TMEM51Q9NW97 253 aa18.3■□□□□ 0.52
SF3A2-201ENST00000221494 MYH7P12883 1935 aa18.3■□□□□ 0.52
SF3A2-201ENST00000221494 ZFYP08048 801 aaPredicted RBP18.3■□□□□ 0.52
SF3A2-201ENST00000221494 KCNA4P22459 653 aa18.3■□□□□ 0.52
SF3A2-201ENST00000221494 TUBB4BP68371 445 aa18.3■□□□□ 0.52
SF3A2-201ENST00000221494 SLC39A14Q15043 492 aa18.3■□□□□ 0.52
SF3A2-201ENST00000221494 RNF216Q9NWF9 866 aaPredicted RBP18.3■□□□□ 0.52
SF3A2-201ENST00000221494 HPSEQ9Y251 543 aa18.3■□□□□ 0.52
SF3A2-201ENST00000221494 CLIC4Q9Y696 253 aa18.3■□□□□ 0.52
SF3A2-201ENST00000221494 PFKFB1P16118 471 aa18.29■□□□□ 0.52
SF3A2-201ENST00000221494 TXNRD1Q16881 649 aa18.29■□□□□ 0.52
SF3A2-201ENST00000221494 REXO1L1PQ8IX06 675 aa18.29■□□□□ 0.52
SF3A2-201ENST00000221494 NCOA5Q9HCD5 579 aaKnown RBP18.29■□□□□ 0.52
SF3A2-201ENST00000221494 MAST3O60307 1309 aa18.29■□□□□ 0.52
SF3A2-201ENST00000221494 ANKRD18BA2A2Z9 1011 aa18.28■□□□□ 0.52
SF3A2-201ENST00000221494 PLSCR1O15162 318 aa18.28■□□□□ 0.52
SF3A2-201ENST00000221494 ADRA2BP18089 450 aa18.28■□□□□ 0.52
SF3A2-201ENST00000221494 UBASH3AP57075 661 aa18.28■□□□□ 0.52
SF3A2-201ENST00000221494 BICDL1Q6ZP65 573 aa18.28■□□□□ 0.52
SF3A2-201ENST00000221494 HSD3B7Q9H2F3 369 aa18.28■□□□□ 0.52
SF3A2-201ENST00000221494 PARP3Q9Y6F1 533 aa18.28■□□□□ 0.52
SF3A2-201ENST00000221494 BCORQ6W2J9 1755 aa18.28■□□□□ 0.52
SF3A2-201ENST00000221494 RFC4P35249 363 aa18.28■□□□□ 0.52
SF3A2-201ENST00000221494 MSL3Q8N5Y2 521 aaKnown RBP18.28■□□□□ 0.52
SF3A2-201ENST00000221494 RIPOR2Q9Y4F9 1068 aa18.28■□□□□ 0.52
SF3A2-201ENST00000221494 TAF1LQ8IZX4 1826 aa18.27■□□□□ 0.52
SF3A2-201ENST00000221494 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.27■□□□□ 0.52
SF3A2-201ENST00000221494 KIF23Q02241 960 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms