RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 MTMR6Q9Y217 621 aa12.06□□□□□ -0.48
VPS18-201ENST00000220509 SSRP1Q08945 709 aaKnown RBP12.06□□□□□ -0.48
VPS18-201ENST00000220509 PTPN21Q16825 1174 aa12.06□□□□□ -0.48
VPS18-201ENST00000220509 CCDC144BQ3MJ40 725 aa12.06□□□□□ -0.48
VPS18-201ENST00000220509 ZNF589Q86UQ0 364 aaPredicted RBP12.06□□□□□ -0.48
VPS18-201ENST00000220509 WASF1Q92558 559 aa12.06□□□□□ -0.48
VPS18-201ENST00000220509 MKNK2Q9HBH9 465 aa12.06□□□□□ -0.48
VPS18-201ENST00000220509 GOLGB1Q14789 3259 aaKnown RBP12.06□□□□□ -0.48
VPS18-201ENST00000220509 SH3TC1Q8TE82 1336 aa12.05□□□□□ -0.48
VPS18-201ENST00000220509 XRN1Q8IZH2 1706 aaKnown RBP12.05□□□□□ -0.48
VPS18-201ENST00000220509 FMN2Q9NZ56 1722 aa12.05□□□□□ -0.48
VPS18-201ENST00000220509 CTAGE5O15320 804 aa12.05□□□□□ -0.48
VPS18-201ENST00000220509 KCTD17Q8N5Z5 321 aa12.05□□□□□ -0.48
VPS18-201ENST00000220509 ANKRD7Q92527 254 aa12.05□□□□□ -0.48
VPS18-201ENST00000220509 ZKSCAN3Q9BRR0 538 aa12.05□□□□□ -0.48
VPS18-201ENST00000220509 ANO10Q9NW15 660 aa12.05□□□□□ -0.48
VPS18-201ENST00000220509 CCDC189A1A4V9 331 aa12.05□□□□□ -0.48
VPS18-201ENST00000220509 GPAA1O43292 621 aa12.05□□□□□ -0.48
VPS18-201ENST00000220509 CCP110O43303 1012 aa12.05□□□□□ -0.48
VPS18-201ENST00000220509 LOC102724428A0A0B4J2F2 783 aa12.05□□□□□ -0.48
VPS18-201ENST00000220509 CCDC196A0A1B0GTZ2 297 aa12.05□□□□□ -0.48
VPS18-201ENST00000220509 ECEL1O95672 775 aa12.05□□□□□ -0.48
VPS18-201ENST00000220509 SFPQP23246 707 aaKnown RBP eCLIP12.05□□□□□ -0.48
VPS18-201ENST00000220509 SIK1P57059 783 aa12.05□□□□□ -0.48
VPS18-201ENST00000220509 AP1ARQ63HQ0 302 aa12.05□□□□□ -0.48
VPS18-201ENST00000220509 CCDC47Q96A33 483 aaKnown RBP12.05□□□□□ -0.48
VPS18-201ENST00000220509 RNF41Q9H4P4 317 aaPredicted RBP12.05□□□□□ -0.48
VPS18-201ENST00000220509 RMI1Q9H9A7 625 aa12.05□□□□□ -0.48
VPS18-201ENST00000220509 HELLSQ9NRZ9 838 aa12.05□□□□□ -0.48
VPS18-201ENST00000220509 CFAP100Q494V2 611 aa12.04□□□□□ -0.48
VPS18-201ENST00000220509 KLHL10Q6JEL2 608 aa12.04□□□□□ -0.48
VPS18-201ENST00000220509 ATP10DQ9P241 1426 aa12.04□□□□□ -0.48
VPS18-201ENST00000220509 MYO1CO00159 1063 aa12.04□□□□□ -0.48
VPS18-201ENST00000220509 SNAP23O00161 211 aa12.04□□□□□ -0.48
VPS18-201ENST00000220509 GNPATO15228 680 aa12.04□□□□□ -0.48
VPS18-201ENST00000220509 PTPN12Q05209 780 aaKnown RBP12.04□□□□□ -0.48
VPS18-201ENST00000220509 SLFNL1Q499Z3 407 aa12.04□□□□□ -0.48
VPS18-201ENST00000220509 KRBA2Q6ZNG9 492 aa12.04□□□□□ -0.48
VPS18-201ENST00000220509 ANKRD23Q86SG2 305 aa12.04□□□□□ -0.48
VPS18-201ENST00000220509 CTCFLQ8NI51 663 aaPredicted RBP12.04□□□□□ -0.48
VPS18-201ENST00000220509 RPS6KL1Q9Y6S9 549 aa12.04□□□□□ -0.48
VPS18-201ENST00000220509 B4E1Z4 1266 aa12.04□□□□□ -0.48
VPS18-201ENST00000220509 MBD4O95243 580 aa12.04□□□□□ -0.48
VPS18-201ENST00000220509 WTAPQ15007 396 aa12.04□□□□□ -0.48
VPS18-201ENST00000220509 SETDB2Q96T68 719 aa12.04□□□□□ -0.48
VPS18-201ENST00000220509 CWC15Q9P013 229 aaKnown RBP12.04□□□□□ -0.48
VPS18-201ENST00000220509 KIF3CO14782 793 aa12.03□□□□□ -0.48
VPS18-201ENST00000220509 TXLNAP40222 546 aa12.03□□□□□ -0.48
VPS18-201ENST00000220509 RBM26Q5T8P6 1007 aaKnown RBP12.03□□□□□ -0.48
VPS18-201ENST00000220509 NLRP3Q96P20 1036 aa12.03□□□□□ -0.48
VPS18-201ENST00000220509 TM6SF1Q9BZW5 370 aa12.03□□□□□ -0.48
VPS18-201ENST00000220509 KDM6AO15550 1401 aaPredicted RBP12.03□□□□□ -0.48
VPS18-201ENST00000220509 ADORA1P30542 326 aa12.03□□□□□ -0.48
VPS18-201ENST00000220509 RFC4P35249 363 aa12.03□□□□□ -0.48
VPS18-201ENST00000220509 APPBP2Q92624 585 aa12.03□□□□□ -0.48
VPS18-201ENST00000220509 ZSWIM6Q9HCJ5 1215 aa12.03□□□□□ -0.48
VPS18-201ENST00000220509 ZCCHC17Q9NP64 241 aaKnown RBP12.03□□□□□ -0.48
VPS18-201ENST00000220509 C6orf229H3BNL8 230 aa12.03□□□□□ -0.48
VPS18-201ENST00000220509 RGS12O14924 1447 aa12.03□□□□□ -0.48
VPS18-201ENST00000220509 SEC31AO94979 1220 aaKnown RBP12.03□□□□□ -0.48
VPS18-201ENST00000220509 CRKLP46109 303 aaKnown RBP12.03□□□□□ -0.48
VPS18-201ENST00000220509 MAP4K1Q92918 833 aa12.03□□□□□ -0.48
VPS18-201ENST00000220509 TSPY2A6NKD2 308 aa12.02□□□□□ -0.48
VPS18-201ENST00000220509 PDE8AO60658 829 aa12.02□□□□□ -0.48
VPS18-201ENST00000220509 CHGBP05060 677 aa12.02□□□□□ -0.48
VPS18-201ENST00000220509 ABCD1P33897 745 aa12.02□□□□□ -0.48
VPS18-201ENST00000220509 CNNM3Q8NE01 707 aa12.02□□□□□ -0.48
VPS18-201ENST00000220509 EPC1Q9H2F5 836 aa12.02□□□□□ -0.48
VPS18-201ENST00000220509 NAIF1Q69YI7 327 aaPredicted RBP12.02□□□□□ -0.49
VPS18-201ENST00000220509 AK7Q96M32 723 aa12.02□□□□□ -0.49
VPS18-201ENST00000220509 HAUS7Q99871 368 aa12.02□□□□□ -0.49
VPS18-201ENST00000220509 CCDC87Q9NVE4 849 aa12.02□□□□□ -0.49
VPS18-201ENST00000220509 KLHL33A6NCF5 533 aa12.02□□□□□ -0.49
VPS18-201ENST00000220509 NAA16Q6N069 864 aaPredicted RBP12.02□□□□□ -0.49
VPS18-201ENST00000220509 PI16Q6UXB8 463 aa12.02□□□□□ -0.49
VPS18-201ENST00000220509 CATIPQ7Z7H3 387 aa12.02□□□□□ -0.49
VPS18-201ENST00000220509 ZSCAN29Q8IWY8 852 aaPredicted RBP12.02□□□□□ -0.49
VPS18-201ENST00000220509 MYL10Q9BUA6 226 aa12.02□□□□□ -0.49
VPS18-201ENST00000220509 FTOQ9C0B1 505 aaKnown RBP eCLIP12.02□□□□□ -0.49
VPS18-201ENST00000220509 GREM2Q9H772 168 aa12.02□□□□□ -0.49
VPS18-201ENST00000220509 ZNF219Q9P2Y4 722 aaPredicted RBP12.02□□□□□ -0.49
VPS18-201ENST00000220509 PHACTR2O75167 634 aa12.01□□□□□ -0.49
VPS18-201ENST00000220509 LMOD1P29536 600 aaPredicted RBP12.01□□□□□ -0.49
VPS18-201ENST00000220509 ARL10Q8N8L6 244 aa12.01□□□□□ -0.49
VPS18-201ENST00000220509 RPGRQ92834 1020 aaKnown RBP12.01□□□□□ -0.49
VPS18-201ENST00000220509 ERO1AQ96HE7 468 aa12.01□□□□□ -0.49
VPS18-201ENST00000220509 TSPAN18Q96SJ8 248 aa12.01□□□□□ -0.49
VPS18-201ENST00000220509 ARMT1Q9H993 441 aa12.01□□□□□ -0.49
VPS18-201ENST00000220509 E7EWF7 191 aa12.01□□□□□ -0.49
VPS18-201ENST00000220509 MCM6Q14566 821 aa12.01□□□□□ -0.49
VPS18-201ENST00000220509 LRRC8AQ8IWT6 810 aa12.01□□□□□ -0.49
VPS18-201ENST00000220509 GIMAP7Q8NHV1 300 aa12.01□□□□□ -0.49
VPS18-201ENST00000220509 SMARCC1Q92922 1105 aaPredicted RBP12.01□□□□□ -0.49
VPS18-201ENST00000220509 CCNL1Q9UK58 526 aaPredicted RBP12.01□□□□□ -0.49
VPS18-201ENST00000220509 NCAPD2Q15021 1401 aa12.01□□□□□ -0.49
VPS18-201ENST00000220509 STX8Q9UNK0 236 aa12.01□□□□□ -0.49
VPS18-201ENST00000220509 ANKRD65E5RJM6 399 aa12□□□□□ -0.49
VPS18-201ENST00000220509 CYP21A2P08686 494 aa12□□□□□ -0.49
VPS18-201ENST00000220509 HSPD1P10809 573 aaKnown RBP12□□□□□ -0.49
VPS18-201ENST00000220509 PUM3Q15397 648 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms