RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 MAPKAPK5Q8IW41 473 aa15.75■□□□□ 0.11
TIMP1-201ENST00000218388 SDR42E1Q8WUS8 393 aa15.75■□□□□ 0.11
TIMP1-201ENST00000218388 FAM151AQ8WW52 585 aa15.75■□□□□ 0.11
TIMP1-201ENST00000218388 OSBPL5Q9H0X9 879 aaPredicted RBP15.75■□□□□ 0.11
TIMP1-201ENST00000218388 POLR2AP24928 1970 aaKnown RBP15.75■□□□□ 0.11
TIMP1-201ENST00000218388 MYH1P12882 1939 aa15.74■□□□□ 0.11
TIMP1-201ENST00000218388 ASTN2O75129 1339 aaPredicted RBP15.74■□□□□ 0.11
TIMP1-201ENST00000218388 COL2A1P02458 1487 aaPredicted RBP15.74■□□□□ 0.11
TIMP1-201ENST00000218388 PRKAB2O43741 272 aa15.74■□□□□ 0.11
TIMP1-201ENST00000218388 REC8O95072 547 aa15.74■□□□□ 0.11
TIMP1-201ENST00000218388 HSPD1P10809 573 aaKnown RBP15.74■□□□□ 0.11
TIMP1-201ENST00000218388 TDO2P48775 406 aa15.74■□□□□ 0.11
TIMP1-201ENST00000218388 TCP10Q12799 353 aa15.74■□□□□ 0.11
TIMP1-201ENST00000218388 NFIAQ12857 509 aa15.74■□□□□ 0.11
TIMP1-201ENST00000218388 CDC37L1Q7L3B6 337 aa15.74■□□□□ 0.11
TIMP1-201ENST00000218388 KRT26Q7Z3Y9 468 aa15.74■□□□□ 0.11
TIMP1-201ENST00000218388 ZNF784Q8NCA9 323 aaPredicted RBP15.74■□□□□ 0.11
TIMP1-201ENST00000218388 DSCC1Q9BVC3 393 aa15.74■□□□□ 0.11
TIMP1-201ENST00000218388 NAPBQ9H115 298 aa15.74■□□□□ 0.11
TIMP1-201ENST00000218388 DHX36Q9H2U1 1008 aaKnown RBP15.74■□□□□ 0.11
TIMP1-201ENST00000218388 DCP1AQ9NPI6 582 aaPredicted RBP15.74■□□□□ 0.11
TIMP1-201ENST00000218388 ANO2Q9NQ90 1003 aa15.74■□□□□ 0.11
TIMP1-201ENST00000218388 FAM198AQ9UFP1 575 aa15.74■□□□□ 0.11
TIMP1-201ENST00000218388 GSG1L2A8MUP6 293 aa15.73■□□□□ 0.11
TIMP1-201ENST00000218388 HLA-DOAP06340 250 aa15.73■□□□□ 0.11
TIMP1-201ENST00000218388 RASA3Q14644 834 aa15.73■□□□□ 0.11
TIMP1-201ENST00000218388 CHADLQ6NUI6 762 aa15.73■□□□□ 0.11
TIMP1-201ENST00000218388 ZSCAN29Q8IWY8 852 aaPredicted RBP15.73■□□□□ 0.11
TIMP1-201ENST00000218388 IFNL3Q8IZI9 196 aa15.73■□□□□ 0.11
TIMP1-201ENST00000218388 HOOK2Q96ED9 719 aa15.73■□□□□ 0.11
TIMP1-201ENST00000218388 DEFB129Q9H1M3 183 aa15.73■□□□□ 0.11
TIMP1-201ENST00000218388 DDX4Q9NQI0 724 aaKnown RBP15.73■□□□□ 0.11
TIMP1-201ENST00000218388 MCM9Q9NXL9 1143 aa15.73■□□□□ 0.11
TIMP1-201ENST00000218388 ARPP21Q9UBL0 812 aaPredicted RBP15.73■□□□□ 0.11
TIMP1-201ENST00000218388 BAZ2AQ9UIF9 1905 aaKnown RBP15.72■□□□□ 0.11
TIMP1-201ENST00000218388 ZMYM6O95789 1325 aa15.72■□□□□ 0.11
TIMP1-201ENST00000218388 DDX60LQ5H9U9 1706 aaKnown RBP15.72■□□□□ 0.11
TIMP1-201ENST00000218388 KIF3CO14782 793 aa15.72■□□□□ 0.11
TIMP1-201ENST00000218388 POLR3DP05423 398 aaPredicted RBP15.72■□□□□ 0.11
TIMP1-201ENST00000218388 POTEIP0CG38 1075 aa15.72■□□□□ 0.11
TIMP1-201ENST00000218388 POTEJP0CG39 1038 aa15.72■□□□□ 0.11
TIMP1-201ENST00000218388 ALX1Q15699 326 aa15.72■□□□□ 0.11
TIMP1-201ENST00000218388 VPS53Q5VIR6 699 aa15.72■□□□□ 0.11
TIMP1-201ENST00000218388 TTC6Q86TZ1 520 aa15.72■□□□□ 0.11
TIMP1-201ENST00000218388 IL25Q9H293 177 aa15.72■□□□□ 0.11
TIMP1-201ENST00000218388 CTNNA3Q9UI47 895 aa15.72■□□□□ 0.11
TIMP1-201ENST00000218388 CNTNAP1P78357 1384 aa15.72■□□□□ 0.11
TIMP1-201ENST00000218388 ATRNL1Q5VV63 1379 aa15.72■□□□□ 0.11
TIMP1-201ENST00000218388 LAMB1P07942 1786 aa15.72■□□□□ 0.11
TIMP1-201ENST00000218388 NF2P35240 595 aa15.71■□□□□ 0.11
TIMP1-201ENST00000218388 MAP1SQ66K74 1059 aaPredicted RBP15.71■□□□□ 0.11
TIMP1-201ENST00000218388 POTEDQ86YR6 584 aa15.71■□□□□ 0.11
TIMP1-201ENST00000218388 TMEM39BQ9GZU3 492 aa15.71■□□□□ 0.11
TIMP1-201ENST00000218388 EPB41L4AQ9HCS5 686 aaPredicted RBP15.71■□□□□ 0.11
TIMP1-201ENST00000218388 MKRN1Q9UHC7 482 aaKnown RBP15.71■□□□□ 0.11
TIMP1-201ENST00000218388 SAP30BPQ9UHR5 308 aaKnown RBP15.71■□□□□ 0.11
TIMP1-201ENST00000218388 U3KPZ7 1027 aaPredicted RBP15.71■□□□□ 0.11
TIMP1-201ENST00000218388 EPB41L2O43491 1005 aaKnown RBP15.7■□□□□ 0.1
TIMP1-201ENST00000218388 SUPT20HL1Q3ZLR7 823 aa15.7■□□□□ 0.1
TIMP1-201ENST00000218388 C8orf34Q49A92 452 aa15.7■□□□□ 0.1
TIMP1-201ENST00000218388 SBK1Q52WX2 424 aa15.7■□□□□ 0.1
TIMP1-201ENST00000218388 USP48Q86UV5 1035 aa15.7■□□□□ 0.1
TIMP1-201ENST00000218388 SMC1BQ8NDV3 1235 aa15.7■□□□□ 0.1
TIMP1-201ENST00000218388 RBM46Q8TBY0 533 aaKnown RBP15.7■□□□□ 0.1
TIMP1-201ENST00000218388 CSRNP1Q96S65 589 aa15.7■□□□□ 0.1
TIMP1-201ENST00000218388 TRIM34Q9BYJ4 488 aa15.7■□□□□ 0.1
TIMP1-201ENST00000218388 PI4KBQ9UBF8 816 aa15.7■□□□□ 0.1
TIMP1-201ENST00000218388 USP17L12C9JPN9 530 aa15.69■□□□□ 0.1
TIMP1-201ENST00000218388 ADM5C9JUS6 153 aa15.69■□□□□ 0.1
TIMP1-201ENST00000218388 USP17L21D6R901 530 aa15.69■□□□□ 0.1
TIMP1-201ENST00000218388 TOMM70O94826 608 aa15.69■□□□□ 0.1
TIMP1-201ENST00000218388 FGAP02671 866 aa15.69■□□□□ 0.1
TIMP1-201ENST00000218388 SLC3A2P08195 630 aaKnown RBP15.69■□□□□ 0.1
TIMP1-201ENST00000218388 IMMTQ16891 758 aaKnown RBP15.69■□□□□ 0.1
TIMP1-201ENST00000218388 MAP4K1Q92918 833 aa15.69■□□□□ 0.1
TIMP1-201ENST00000218388 GLIS2Q9BZE0 524 aaPredicted RBP15.69■□□□□ 0.1
TIMP1-201ENST00000218388 LSG1Q9H089 658 aaKnown RBP15.69■□□□□ 0.1
TIMP1-201ENST00000218388 TAOK2Q9UL54 1235 aa15.69■□□□□ 0.1
TIMP1-201ENST00000218388 PALD1Q9ULE6 856 aa15.69■□□□□ 0.1
TIMP1-201ENST00000218388 SCAF8Q9UPN6 1271 aaKnown RBP15.69■□□□□ 0.1
TIMP1-201ENST00000218388 LAMA4Q16363 1823 aa15.68■□□□□ 0.1
TIMP1-201ENST00000218388 DDTLA6NHG4 134 aaPredicted RBP15.68■□□□□ 0.1
TIMP1-201ENST00000218388 MINDY4BA8MYZ0 360 aa15.68■□□□□ 0.1
TIMP1-201ENST00000218388 FOXP2O15409 715 aa15.68■□□□□ 0.1
TIMP1-201ENST00000218388 PTH1RQ03431 593 aa15.68■□□□□ 0.1
TIMP1-201ENST00000218388 DCAF15Q66K64 600 aa15.68■□□□□ 0.1
TIMP1-201ENST00000218388 CTR9Q6PD62 1173 aa15.68■□□□□ 0.1
TIMP1-201ENST00000218388 ZFPM1Q8IX07 1006 aa15.68■□□□□ 0.1
TIMP1-201ENST00000218388 CRACR2BQ8N4Y2 399 aaPredicted RBP15.68■□□□□ 0.1
TIMP1-201ENST00000218388 EHD4Q9H223 541 aa15.68■□□□□ 0.1
TIMP1-201ENST00000218388 ZNF213O14771 459 aa15.67■□□□□ 0.1
TIMP1-201ENST00000218388 MCCP23508 829 aa15.67■□□□□ 0.1
TIMP1-201ENST00000218388 PPARAQ07869 468 aa15.67■□□□□ 0.1
TIMP1-201ENST00000218388 C12orf60Q5U649 245 aa15.67■□□□□ 0.1
TIMP1-201ENST00000218388 RNF20Q5VTR2 975 aa15.67■□□□□ 0.1
TIMP1-201ENST00000218388 SH3BP5LQ7L8J4 393 aa15.67■□□□□ 0.1
TIMP1-201ENST00000218388 FOXP4Q8IVH2 680 aaPredicted RBP15.67■□□□□ 0.1
TIMP1-201ENST00000218388 CDCA5Q96FF9 252 aa15.67■□□□□ 0.1
TIMP1-201ENST00000218388 TEPSINQ96N21 525 aa15.67■□□□□ 0.1
TIMP1-201ENST00000218388 ZNF287Q9HBT7 754 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms