RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 KBTBD3Q8NAB2 608 aa13.79□□□□□ -0.2
TSPAN9-201ENST00000011898 CBX8Q9HC52 389 aa13.79□□□□□ -0.2
TSPAN9-201ENST00000011898 CCDC175P0C221 793 aa13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 UQCRFS1P1P0C7P4 283 aa13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 TERF2Q15554 542 aa13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 CATIPQ7Z7H3 387 aa13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 GOLGA1Q92805 767 aa13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 A0A0D9SFI3 127 aa13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 CCDC172P0C7W6 258 aa13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 RXRAP19793 462 aa13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 FAM160A1Q05DH4 1040 aa13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 ADCK5Q3MIX3 580 aa13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 TANGO6Q9C0B7 1094 aa13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 ZSWIM6Q9HCJ5 1215 aa13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 EYA2O00167 538 aa13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 WTAPQ15007 396 aa13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 PRDM4Q9UKN5 801 aa13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 TPCN1Q9ULQ1 816 aa13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 SMC1AQ14683 1233 aaKnown RBP13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 FMNL3Q8IVF7 1028 aa13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 CLSTN2Q9H4D0 955 aa13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 HELLSQ9NRZ9 838 aa13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 IFNKQ9P0W0 207 aa13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 PUF60Q9UHX1 559 aaKnown RBP13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 IQSEC3Q9UPP2 1182 aaPredicted RBP13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 RRP15Q9Y3B9 282 aaKnown RBP13.78□□□□□ -0.2
TSPAN9-201ENST00000011898 KRT18P05783 430 aaKnown RBP13.77□□□□□ -0.2
TSPAN9-201ENST00000011898 RHOXF2BP0C7M4 288 aa13.77□□□□□ -0.2
TSPAN9-201ENST00000011898 NLRP5P59047 1200 aa13.77□□□□□ -0.2
TSPAN9-201ENST00000011898 TEX2Q8IWB9 1127 aa13.77□□□□□ -0.2
TSPAN9-201ENST00000011898 RHOXF2Q9BQY4 288 aa13.77□□□□□ -0.2
TSPAN9-201ENST00000011898 CARD6Q9BX69 1037 aa13.77□□□□□ -0.2
TSPAN9-201ENST00000011898 LSG1Q9H089 658 aaKnown RBP13.77□□□□□ -0.2
TSPAN9-201ENST00000011898 ZHX3Q9H4I2 956 aa13.77□□□□□ -0.2
TSPAN9-201ENST00000011898 MKNK2Q9HBH9 465 aa13.77□□□□□ -0.2
TSPAN9-201ENST00000011898 RGS12O14924 1447 aa13.77□□□□□ -0.2
TSPAN9-201ENST00000011898 PKD1L3Q7Z443 1732 aa13.77□□□□□ -0.2
TSPAN9-201ENST00000011898 GOLGA6L9A6NEM1 432 aa13.77□□□□□ -0.21
TSPAN9-201ENST00000011898 MARCH10Q8NA82 808 aaPredicted RBP13.77□□□□□ -0.21
TSPAN9-201ENST00000011898 HELBQ8NG08 1087 aaPredicted RBP13.77□□□□□ -0.21
TSPAN9-201ENST00000011898 PLBD2Q8NHP8 589 aa13.77□□□□□ -0.21
TSPAN9-201ENST00000011898 ZNF652Q9Y2D9 606 aa13.77□□□□□ -0.21
TSPAN9-201ENST00000011898 PPP2R3AQ06190 1150 aa13.77□□□□□ -0.21
TSPAN9-201ENST00000011898 OTUD7BQ6GQQ9 843 aa13.77□□□□□ -0.21
TSPAN9-201ENST00000011898 KRT27Q7Z3Y8 459 aa13.77□□□□□ -0.21
TSPAN9-201ENST00000011898 PIGBQ92521 554 aa13.77□□□□□ -0.21
TSPAN9-201ENST00000011898 ZNF594Q96JF6 807 aaPredicted RBP13.77□□□□□ -0.21
TSPAN9-201ENST00000011898 CCDC113Q9H0I3 377 aa13.77□□□□□ -0.21
TSPAN9-201ENST00000011898 TMCO5BA8MYB1 307 aa13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 ATL3Q6DD88 541 aa13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 FAM89AQ96GI7 184 aa13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 LLPHQ9BRT6 129 aaKnown RBP13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 LIG3P49916 1009 aa13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 KANK3Q6NY19 840 aa13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 TTC6Q86TZ1 520 aa13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 ANKRD18AQ8IVF6 992 aa13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 NEURL1BA8MQ27 555 aa13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 ATP5JP18859 108 aa13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 BRAPQ7Z569 592 aa13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 NUP88Q99567 741 aaPredicted RBP13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 CTAGE15A4D2H0 777 aa13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 CTAGE8P0CG41 777 aa13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 USP5P45974 858 aa13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 FAM196AQ6ZSG2 479 aa13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 CTAGE6Q86UF2 777 aa13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 CTAGE4Q8IX94 777 aa13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 KIF2CQ99661 725 aa13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 FBXO3Q9UK99 471 aa13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 NSFL1CQ9UNZ2 370 aaKnown RBP13.76□□□□□ -0.21
TSPAN9-201ENST00000011898 ATRNO75882 1429 aa13.75□□□□□ -0.21
TSPAN9-201ENST00000011898 RTN1Q16799 776 aa13.75□□□□□ -0.21
TSPAN9-201ENST00000011898 SPECC1Q5M775 1068 aa13.75□□□□□ -0.21
TSPAN9-201ENST00000011898 CCDC121Q6ZUS5 278 aa13.75□□□□□ -0.21
TSPAN9-201ENST00000011898 TCEAL9Q9UHQ7 104 aa13.75□□□□□ -0.21
TSPAN9-201ENST00000011898 MRVI1Q9Y6F6 885 aa13.75□□□□□ -0.21
TSPAN9-201ENST00000011898 NRAPQ86VF7 1730 aa13.75□□□□□ -0.21
TSPAN9-201ENST00000011898 HEG1Q9ULI3 1381 aa13.75□□□□□ -0.21
TSPAN9-201ENST00000011898 A1BGP04217 495 aa13.75□□□□□ -0.21
TSPAN9-201ENST00000011898 MATR3P43243 847 aaKnown RBP eCLIP13.75□□□□□ -0.212e-6■■□□□ 11.9
TSPAN9-201ENST00000011898 AFMP43652 599 aa13.75□□□□□ -0.21
TSPAN9-201ENST00000011898 DNA2P51530 1060 aa13.75□□□□□ -0.21
TSPAN9-201ENST00000011898 KRT23Q9C075 422 aa13.75□□□□□ -0.21
TSPAN9-201ENST00000011898 MYO1CO00159 1063 aa13.75□□□□□ -0.21
TSPAN9-201ENST00000011898 LRMPQ12912 555 aa13.75□□□□□ -0.21
TSPAN9-201ENST00000011898 PROSER3Q2NL68 480 aa13.75□□□□□ -0.21
TSPAN9-201ENST00000011898 HDXQ7Z353 690 aa13.75□□□□□ -0.21
TSPAN9-201ENST00000011898 SEC62Q99442 399 aaKnown RBP13.75□□□□□ -0.21
TSPAN9-201ENST00000011898 CCDC194A0A1B0GVG4 234 aa13.74□□□□□ -0.21
TSPAN9-201ENST00000011898 TMTC2Q8N394 836 aa13.74□□□□□ -0.21
TSPAN9-201ENST00000011898 SLC4A4Q9Y6R1 1079 aa13.74□□□□□ -0.21
TSPAN9-201ENST00000011898 ZNF75DP51815 510 aa13.74□□□□□ -0.21
TSPAN9-201ENST00000011898 MSL1Q68DK7 614 aa13.74□□□□□ -0.21
TSPAN9-201ENST00000011898 CCDC43Q96MW1 224 aaKnown RBP13.74□□□□□ -0.21
TSPAN9-201ENST00000011898 CNNM2Q9H8M5 875 aa13.74□□□□□ -0.21
TSPAN9-201ENST00000011898 ASAP1Q9ULH1 1129 aa13.74□□□□□ -0.21
TSPAN9-201ENST00000011898 NDUFAB1O14561 156 aa13.74□□□□□ -0.21
TSPAN9-201ENST00000011898 LUC7LQ9NQ29 371 aaKnown RBP13.74□□□□□ -0.21
TSPAN9-201ENST00000011898 BMP2KQ9NSY1 1161 aaPredicted RBP13.74□□□□□ -0.21
TSPAN9-201ENST00000011898 N4BP3O15049 544 aa13.73□□□□□ -0.21
TSPAN9-201ENST00000011898 DZIP1Q86YF9 867 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms