RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 NpcdF8VQB8 469 aa10.69□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Gm42641I6L9G2 585 aa10.69□□□□□ -0.7
Ldlr-202ENSMUST00000213114 MthfslL7N466 203 aa10.69□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Rps8P62242 208 aaKnown RBP10.69□□□□□ -0.7
Ldlr-202ENSMUST00000213114 AtripQ8BMG1 785 aa10.69□□□□□ -0.7
Ldlr-202ENSMUST00000213114 TxlnbQ8VBT1 685 aa10.69□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Krt79Q8VED5 531 aa10.69□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Gm4340L7N2C4 268 aa10.69□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ccdc174Q3U155 467 aa10.69□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Zfp397Q7TNK4 527 aa10.69□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Pde5aQ8CG03 865 aa10.69□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Kcnk13Q8R1P5 405 aa10.69□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Smc1bQ920F6 1248 aa10.69□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Gm45140A0A0N4SUM8 220 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Spocd1B1ASB6 936 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Tuft1O08970 390 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Acap3Q6NXL5 833 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Clca2Q8BG22 942 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Sgsm1Q8BPQ7 1093 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Pcdhb15Q91Y04 786 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Egfl6Q9JJZ5 550 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Adamts7Q68SA9 1657 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Cyp2j7A0A140T8U1 504 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Fam186bD3Z420 943 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Diaph1O08808 1255 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Eif6O55135 245 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ddit3P35639 168 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 MpndQ3TV65 487 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Tspyl3Q3UYP3 334 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ssfa2Q922B9 1252 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Tmem132aQ922P8 1018 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Elf2Q9JHC9 593 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Plekhg2Q6KAU7 1340 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Tbc1d2B1AVH7 922 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ppfibp2O35711 882 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Zbtb7aO88939 569 aaKnown RBP10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 AcrbpQ3V140 540 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Cacna2d4Q5RJF7 1116 aa10.68□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Zfp804bA0A0G2JGH6 1343 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ccdc121E9Q6D3 323 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 NppbP40753 121 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Igbp1Q61249 340 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ccdc73Q8CDM4 1066 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Tubgcp2Q921G8 905 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Suclg2Q9Z2I8 433 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Sos2Q02384 1333 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Epb41l2O70318 988 aaKnown RBP10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Pde11aP0C1Q2 933 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Dok7Q18PE0 504 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Cep63Q3UPP8 700 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Pde1cQ64338 706 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Pdlim2Q8R1G6 349 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Add2Q9QYB8 725 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Gna11P21278 359 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Map3k12Q60700 888 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Kif1bpQ6ZPU9 617 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Hexim1Q8R409 356 aaKnown RBP10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 FliiQ9JJ28 1271 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 U2af2P26369 475 aaKnown RBP10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 PpardP35396 440 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ppfibp1Q8C8U0 969 aaKnown RBP10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Mylk2Q8VCR8 613 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Zcrb1Q9CZ96 217 aaKnown RBP10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Nol7Q9D7Z3 254 aaKnown RBP10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 IcoslgQ9JHJ8 322 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Sorbs3Q9R1Z8 733 aa10.67□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Gm43638A0A0J9YU36 694 aa10.66□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Brpf3B2KF05 1204 aaKnown RBP10.66□□□□□ -0.7
Ldlr-202ENSMUST00000213114 LarsQ8BMJ2 1178 aa10.66□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ccdc105Q9D4K7 499 aa10.66□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Dydc1Q9D9T0 175 aa10.66□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Foxp1P58462 705 aa10.66□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Fam83bQ0VBM2 1012 aa10.66□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Slc27a1Q60714 646 aa10.66□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ubxn10Q8BG34 277 aa10.66□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Lrrd1Q8C0R9 853 aa10.66□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Efcc1Q9JJF6 558 aa10.66□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Dip2aQ8BWT5 1523 aa10.66□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Zfp853A0A1D5RM95 733 aa10.66□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Capza3P70190 299 aa10.66□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Exoc8Q6PGF7 716 aa10.66□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Hps4Q99KG7 671 aa10.66□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Add3Q9QYB5 706 aaKnown RBP10.66□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Uso1Q9Z1Z0 959 aaKnown RBP10.66□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ccne2Q9Z238 404 aa10.66□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Lrrc8aQ80WG5 810 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ppm1mQ8BU27 406 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 SltmQ8CH25 1031 aaKnown RBP10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Stn1Q8K2X3 378 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Gimap7Q8R379 293 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Hps3Q91VB4 1002 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Hdac9Q99N13 588 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Gm10378F6XQQ1 160 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ctdnep1Q3TP92 244 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Kdm1aQ6ZQ88 853 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Ctdspl2Q8BG15 465 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Cep128Q8BI22 1102 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Usp44Q8C2S0 711 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 AdpgkQ8VDL4 496 aa10.65□□□□□ -0.7
Ldlr-202ENSMUST00000213114 Arpp21Q9DCB4 807 aa10.65□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms