RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Spata31d1bE9QA57 1361 aa11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Dok7Q18PE0 504 aa11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Usp28Q5I043 1051 aa11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 DlatQ8BMF4 642 aa11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Pik3ap1Q9EQ32 811 aa11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Tbc1d8Q9Z1A9 1134 aa11.04□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Myl3P09542 204 aa11.03□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Calm1P0DP26 149 aaKnown RBP11.03□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Calm2P0DP27 149 aaKnown RBP11.03□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Calm3P0DP28 149 aaKnown RBP11.03□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Tyro3P55144 880 aa11.03□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Gtf2f1Q3THK3 508 aaKnown RBP11.03□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Znf18Q810A1 556 aa11.03□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Gm21969J3QJZ1 289 aa11.03□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Ampd3O08739 766 aa11.03□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 EzrP26040 586 aaKnown RBP11.03□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Prpf4bQ61136 1007 aaKnown RBP11.03□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 HelbQ6NVF4 1074 aa11.03□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Trim11Q99PQ2 467 aa11.03□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Cnpy3Q9DAU1 276 aa11.03□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Zkscan7E9PVW1 718 aa11.03□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Alg3Q8K2A8 438 aa11.03□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Ube2q2Q8K2Z8 378 aa11.03□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Trmt44Q9D2Q2 713 aa11.03□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Gdf11Q9Z1W4 405 aa11.03□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Snapc4Q8BP86 1333 aa11.03□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Kifc2O08672 792 aa11.02□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Atp6v0a2P15920 856 aa11.02□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 NfixP70257 488 aa11.02□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Q3TYL0 343 aa11.02□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Tekt3Q6X6Z7 490 aa11.02□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Otop3Q80UF9 577 aa11.02□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Tmem179Q8BHH9 233 aa11.02□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Stn1Q8K2X3 378 aa11.02□□□□□ -0.64
Sh3rf1-202ENSMUST00000209611 Psd3Q2PFD7 1037 aa11.02□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Ncbp1Q3UYV9 790 aaKnown RBP11.02□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Ppp2r5bQ6PD28 497 aa11.02□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Atp1a3Q6PIC6 1013 aa11.02□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Terb1Q8C0V1 768 aa11.02□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Becn1O88597 448 aa11.02□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 QarsQ8BML9 775 aa11.02□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Ankrd31A0A140LI88 1765 aa11.02□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Adcy5P84309 1262 aa11.02□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Triml1Q8BVP1 470 aa11.02□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Shisa4Q8CA71 197 aa11.02□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Ush1cQ9ES64 910 aa11.02□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Adck5Q80V03 582 aa11.01□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 ParnQ8VDG3 624 aa11.01□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Yeats4Q9CR11 227 aaKnown RBP11.01□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Ripk4Q9ERK0 786 aa11.01□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Lama4P97927 1816 aa11.01□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Ccdc162pQ0VG85 912 aa11.01□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 MpndQ3TV65 487 aa11.01□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Kif1bpQ6ZPU9 617 aa11.01□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Ttll4Q80UG8 1193 aa11.01□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Trim29Q8R2Q0 587 aa11.01□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Rcan1Q9JHG6 198 aa11.01□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Clic4Q9QYB1 253 aa11.01□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Slurp2P0DP59 97 aa11.01□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Kmt5bQ3U8K7 883 aa11.01□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Ctr9Q62018 1173 aaKnown RBP11.01□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Kiaa0754Q69ZZ9 979 aa11.01□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Znf287Q9EQB9 759 aa11.01□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Atp6v1aP50516 617 aaKnown RBP11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Gas2l3Q3UWW6 683 aa11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Fnbp4Q6ZQ03 1031 aa11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Kcnj14Q8JZN3 434 aa11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Acot9Q9R0X4 439 aaKnown RBP11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Tmtc2Q56A06 836 aa11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Ltbp1Q8CG19 1712 aa11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Col22a1E9Q7P1 1613 aa11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Myo1bP46735 1107 aa11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Siah1aP61092 282 aa11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Ccdc51Q3URS9 406 aa11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Pus7lQ8CE46 702 aa11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Hps4Q99KG7 671 aa11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Greb1lB9EJV3 1913 aa11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Aox3G3X982 1335 aa11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Stx1aO35526 288 aa11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Mex3cQ05A36 652 aaKnown RBP11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Tex2Q6ZPJ0 1128 aaKnown RBP11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 IqcgQ80W32 419 aa11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Larp6Q8BN59 492 aa11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Ccdc150Q8CDI7 1110 aa11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Ubac1Q8VDI7 409 aa11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Pcdhb5Q91XZ5 792 aa11□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Cyp26c1B2RXA7 518 aa10.99□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Pdia4P08003 638 aaKnown RBP10.99□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Znf667Q2TL60 609 aa10.99□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Znf653Q6YND2 615 aa10.99□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Tomm22Q9CPQ3 142 aa10.99□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Clip2Q9Z0H8 1047 aa10.99□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Col3a1P08121 1464 aa10.99□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Ces1aE9PYP1 563 aa10.99□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Lins1Q3U1D0 764 aa10.99□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 CpzQ8R4V4 654 aa10.99□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Gtf2iQ9ESZ8 998 aaKnown RBP10.99□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 Clec11aO88200 328 aa10.99□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 1810065E05RikQ5NC41 235 aa10.99□□□□□ -0.65
Sh3rf1-202ENSMUST00000209611 AsnsQ61024 561 aa10.99□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms