RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 KhnynQ80U38 671 aa23.62■■□□□ 1.37
Lig3-209ENSMUST00000173009 Otop3Q80UF9 577 aa23.62■■□□□ 1.37
Lig3-209ENSMUST00000173009 Hmg20bQ9Z104 317 aa23.62■■□□□ 1.37
Lig3-209ENSMUST00000173009 SisF8VQM5 1818 aa23.62■■□□□ 1.37
Lig3-209ENSMUST00000173009 Igf2rQ07113 2483 aaKnown RBP23.62■■□□□ 1.37
Lig3-209ENSMUST00000173009 Cd3dP04235 173 aa23.61■■□□□ 1.37
Lig3-209ENSMUST00000173009 Aak1Q3UHJ0 959 aa23.61■■□□□ 1.37
Lig3-209ENSMUST00000173009 Tmprss11eQ5S248 423 aa23.61■■□□□ 1.37
Lig3-209ENSMUST00000173009 Fxr1Q61584 677 aaKnown RBP23.61■■□□□ 1.37
Lig3-209ENSMUST00000173009 Sez6lQ6P1D5 963 aa23.61■■□□□ 1.37
Lig3-209ENSMUST00000173009 Atf7Q8R0S1 413 aa23.61■■□□□ 1.37
Lig3-209ENSMUST00000173009 Q3TYL0 343 aa23.6■■□□□ 1.37
Lig3-209ENSMUST00000173009 Tmem130Q6NXM3 419 aa23.6■■□□□ 1.37
Lig3-209ENSMUST00000173009 Bap1Q99PU7 728 aa23.6■■□□□ 1.37
Lig3-209ENSMUST00000173009 Znf667Q2TL60 609 aa23.6■■□□□ 1.37
Lig3-209ENSMUST00000173009 Sgsm2Q80U12 1005 aa23.6■■□□□ 1.37
Lig3-209ENSMUST00000173009 Mei1Q9D4I2 1268 aa23.6■■□□□ 1.37
Lig3-209ENSMUST00000173009 Txnrd2Q9JLT4 524 aa23.6■■□□□ 1.37
Lig3-209ENSMUST00000173009 Polr2aP08775 1970 aaKnown RBP23.59■■□□□ 1.37
Lig3-209ENSMUST00000173009 Irgm2A0A140LIF8 407 aa23.59■■□□□ 1.37
Lig3-209ENSMUST00000173009 Ano3A2AHL1 981 aa23.59■■□□□ 1.37
Lig3-209ENSMUST00000173009 Vmn2r68L7N2B3 851 aa23.59■■□□□ 1.37
Lig3-209ENSMUST00000173009 Casp12O08736 419 aa23.58■■□□□ 1.37
Lig3-209ENSMUST00000173009 Ddx20Q9JJY4 825 aaKnown RBP23.58■■□□□ 1.37
Lig3-209ENSMUST00000173009 B3galt4Q9Z0F0 371 aa23.58■■□□□ 1.37
Lig3-209ENSMUST00000173009 AfdnQ9QZQ1 1820 aaKnown RBP23.58■■□□□ 1.37
Lig3-209ENSMUST00000173009 Plekhg2Q6KAU7 1340 aa23.58■■□□□ 1.36
Lig3-209ENSMUST00000173009 Fgl2P12804 432 aa23.57■■□□□ 1.36
Lig3-209ENSMUST00000173009 Tut1Q8R3F9 869 aa23.57■■□□□ 1.36
Lig3-209ENSMUST00000173009 Ndufv1Q91YT0 464 aa23.57■■□□□ 1.36
Lig3-209ENSMUST00000173009 Sil1Q9EPK6 465 aa23.57■■□□□ 1.36
Lig3-209ENSMUST00000173009 Bcorl1A2AQH4 1781 aa23.57■■□□□ 1.36
Lig3-209ENSMUST00000173009 FAM186AQ9D9R9 1790 aa23.57■■□□□ 1.36
Lig3-209ENSMUST00000173009 Gm36210A0A1B0GS00 229 aa23.57■■□□□ 1.36
Lig3-209ENSMUST00000173009 Cyp3a59D3Z2W7 503 aa23.57■■□□□ 1.36
Lig3-209ENSMUST00000173009 Anapc15P60007 132 aa23.57■■□□□ 1.36
Lig3-209ENSMUST00000173009 Cdk8Q8R3L8 464 aa23.57■■□□□ 1.36
Lig3-209ENSMUST00000173009 Cdca7lQ922M5 438 aa23.57■■□□□ 1.36
Lig3-209ENSMUST00000173009 Zbtb43Q9DAI4 467 aa23.57■■□□□ 1.36
Lig3-209ENSMUST00000173009 Ncf1Q09014 390 aa23.56■■□□□ 1.36
Lig3-209ENSMUST00000173009 Fam196bQ6GQV1 535 aa23.56■■□□□ 1.36
Lig3-209ENSMUST00000173009 Ccdc158Q8CDI6 1109 aa23.56■■□□□ 1.36
Lig3-209ENSMUST00000173009 Myh2G3UW82 1942 aa23.56■■□□□ 1.36
Lig3-209ENSMUST00000173009 UtrnE9Q6R7 3430 aa23.56■■□□□ 1.36
Lig3-209ENSMUST00000173009 Kcnb2A6H8H5 907 aa23.55■■□□□ 1.36
Lig3-209ENSMUST00000173009 Krt84Q99M73 603 aa23.55■■□□□ 1.36
Lig3-209ENSMUST00000173009 Aldh1b1Q9CZS1 519 aa23.55■■□□□ 1.36
Lig3-209ENSMUST00000173009 Abhd15Q5F2F2 459 aa23.55■■□□□ 1.36
Lig3-209ENSMUST00000173009 Gm11437Q5QR91 290 aa23.55■■□□□ 1.36
Lig3-209ENSMUST00000173009 Rnf41Q8BH75 317 aa23.55■■□□□ 1.36
Lig3-209ENSMUST00000173009 Atad2Q8CDM1 1040 aa23.55■■□□□ 1.36
Lig3-209ENSMUST00000173009 Tmc1Q8R4P5 757 aa23.55■■□□□ 1.36
Lig3-209ENSMUST00000173009 Plxnb2B2RXS4 1842 aa23.54■■□□□ 1.36
Lig3-209ENSMUST00000173009 Tspoap1Q7TNF8 1846 aa23.54■■□□□ 1.36
Lig3-209ENSMUST00000173009 Cyp2d34L7N463 504 aa23.54■■□□□ 1.36
Lig3-209ENSMUST00000173009 Slc1a4O35874 532 aa23.54■■□□□ 1.36
Lig3-209ENSMUST00000173009 Znf326O88291 580 aa23.54■■□□□ 1.36
Lig3-209ENSMUST00000173009 Stk11ipQ3TAA7 1072 aa23.54■■□□□ 1.36
Lig3-209ENSMUST00000173009 Akap4Q60662 849 aa23.54■■□□□ 1.36
Lig3-209ENSMUST00000173009 Mapk4Q6P5G0 583 aa23.54■■□□□ 1.36
Lig3-209ENSMUST00000173009 Sp8Q8BMJ8 486 aa23.54■■□□□ 1.36
Lig3-209ENSMUST00000173009 Epc2Q8C0I4 808 aa23.54■■□□□ 1.36
Lig3-209ENSMUST00000173009 Nup133Q8R0G9 1155 aa23.54■■□□□ 1.36
Lig3-209ENSMUST00000173009 Pcdhb22Q91XZ8 794 aa23.54■■□□□ 1.36
Lig3-209ENSMUST00000173009 Klrc1Q9Z202 244 aa23.54■■□□□ 1.36
Lig3-209ENSMUST00000173009 Trpm7Q923J1 1863 aa23.54■■□□□ 1.36
Lig3-209ENSMUST00000173009 Lipo1J3QME6 396 aa23.53■■□□□ 1.36
Lig3-209ENSMUST00000173009 PgfP49764 158 aa23.53■■□□□ 1.36
Lig3-209ENSMUST00000173009 Ccdc174Q3U155 467 aa23.53■■□□□ 1.36
Lig3-209ENSMUST00000173009 Mrps27Q8BK72 415 aaKnown RBP23.53■■□□□ 1.36
Lig3-209ENSMUST00000173009 EngaseQ8BX80 734 aa23.53■■□□□ 1.36
Lig3-209ENSMUST00000173009 Ppp1r11Q8K1L5 131 aa23.53■■□□□ 1.36
Lig3-209ENSMUST00000173009 Tceanc2Q8R2M0 207 aa23.53■■□□□ 1.36
Lig3-209ENSMUST00000173009 Tcof1O08784 1320 aaKnown RBP23.53■■□□□ 1.36
Lig3-209ENSMUST00000173009 Tjap1Q9DCD5 539 aa23.52■■□□□ 1.36
Lig3-209ENSMUST00000173009 Zcchc17Q9ESX4 241 aaKnown RBP23.52■■□□□ 1.36
Lig3-209ENSMUST00000173009 Psma5Q9Z2U1 241 aaKnown RBP23.52■■□□□ 1.36
Lig3-209ENSMUST00000173009 Gm10093D3YYI8 482 aa23.52■■□□□ 1.36
Lig3-209ENSMUST00000173009 Gm29094F6Q785 221 aa23.52■■□□□ 1.36
Lig3-209ENSMUST00000173009 Hdac1O09106 482 aaKnown RBP23.52■■□□□ 1.36
Lig3-209ENSMUST00000173009 Pald1P70261 859 aa23.52■■□□□ 1.36
Lig3-209ENSMUST00000173009 Gjb2Q00977 226 aa23.52■■□□□ 1.36
Lig3-209ENSMUST00000173009 Cep131Q62036 1060 aa23.52■■□□□ 1.36
Lig3-209ENSMUST00000173009 Htatsf1Q8BGC0 757 aa23.52■■□□□ 1.36
Lig3-209ENSMUST00000173009 Tmod2Q9JKK7 351 aa23.52■■□□□ 1.36
Lig3-209ENSMUST00000173009 Cry2Q9R194 592 aa23.52■■□□□ 1.36
Lig3-209ENSMUST00000173009 Pcdh15Q99PJ1 1943 aa23.52■■□□□ 1.36
Lig3-209ENSMUST00000173009 Ltbp2O08999 1813 aa23.52■■□□□ 1.36
Lig3-209ENSMUST00000173009 Phactr2B1AVP0 632 aa23.51■■□□□ 1.35
Lig3-209ENSMUST00000173009 Prkg1P0C605 671 aa23.51■■□□□ 1.35
Lig3-209ENSMUST00000173009 Cnnm2Q3TWN3 875 aa23.51■■□□□ 1.35
Lig3-209ENSMUST00000173009 Prdm1Q60636 856 aa23.51■■□□□ 1.35
Lig3-209ENSMUST00000173009 Krt74Q6IFZ9 495 aa23.51■■□□□ 1.35
Lig3-209ENSMUST00000173009 Slx4ipQ9D7Y9 413 aa23.51■■□□□ 1.35
Lig3-209ENSMUST00000173009 Rabep1O35551 862 aa23.5■■□□□ 1.35
Lig3-209ENSMUST00000173009 Eif5P59325 429 aaKnown RBP23.5■■□□□ 1.35
Lig3-209ENSMUST00000173009 Rc3h1Q4VGL6 1130 aaKnown RBP23.5■■□□□ 1.35
Lig3-209ENSMUST00000173009 Znf697Q569E7 569 aa23.5■■□□□ 1.35
Lig3-209ENSMUST00000173009 Tll1Q62381 1013 aa23.5■■□□□ 1.35
Lig3-209ENSMUST00000173009 Gm21985Q6P6P5 1106 aa23.5■■□□□ 1.35
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms