RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Slc4a1P04919 929 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Psmc4P54775 418 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Klhdc9Q3USL1 350 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Ccdc84Q4VA36 332 aaKnown RBP9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 ShbQ6PD21 503 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Prpf40bQ80W14 870 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Aoc2Q812C9 757 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Bclaf1Q8K019 919 aaKnown RBP9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Yipf1Q91VU1 306 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Sept14Q9DA97 430 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Spint1Q9R097 507 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Syt5Q9R0N5 386 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Tll2Q9WVM6 1012 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Pitpnm2Q6ZPQ6 1335 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Cfap99A0A140LIX9 648 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Ier5O89113 308 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 ThbdP15306 577 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Arl14Q3SXC5 192 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Srrm1Q52KI8 946 aaKnown RBP9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Rbm27Q5SFM8 1060 aaKnown RBP9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Stxbp2Q64324 593 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Ces5aQ6AW46 575 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Garem2Q6PAJ3 880 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Fam205cQ80YD3 371 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Map10Q8BJS7 891 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Calhm4Q8CE93 315 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 HdlbpQ8VDJ3 1268 aaKnown RBP9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Zbed3Q9D0L1 228 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 1700018B08RikQ9DA83 213 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Irx5Q9JKQ4 484 aa9.97□□□□□ -0.81
Trim40-203ENSMUST00000172711 Aox4Q3TYQ9 1336 aa9.96□□□□□ -0.82
Trim40-203ENSMUST00000172711 Tuft1O08970 390 aa9.96□□□□□ -0.82
Trim40-203ENSMUST00000172711 Adam7O35227 789 aa9.96□□□□□ -0.82
Trim40-203ENSMUST00000172711 Stat5bP42232 786 aa9.96□□□□□ -0.82
Trim40-203ENSMUST00000172711 Fdx1P46656 188 aa9.96□□□□□ -0.82
Trim40-203ENSMUST00000172711 Irf5P56477 497 aa9.96□□□□□ -0.82
Trim40-203ENSMUST00000172711 Siah1aP61092 282 aa9.96□□□□□ -0.82
Trim40-203ENSMUST00000172711 PrkczQ02956 592 aa9.96□□□□□ -0.82
Trim40-203ENSMUST00000172711 Crlf2Q8CII9 359 aa9.96□□□□□ -0.82
Trim40-203ENSMUST00000172711 Itm2cQ91VK4 269 aa9.96□□□□□ -0.82
Trim40-203ENSMUST00000172711 Slc24a3Q99PD7 645 aa9.96□□□□□ -0.82
Trim40-203ENSMUST00000172711 Elp3Q9CZX0 547 aa9.96□□□□□ -0.82
Trim40-203ENSMUST00000172711 Mei1Q9D4I2 1268 aa9.96□□□□□ -0.82
Trim40-203ENSMUST00000172711 Leng1Q9DB98 261 aa9.96□□□□□ -0.82
Trim40-203ENSMUST00000172711 Epb41l3Q9WV92 929 aa9.96□□□□□ -0.82
Trim40-203ENSMUST00000172711 SynrgQ5SV85 1306 aa9.95□□□□□ -0.82
Trim40-203ENSMUST00000172711 Stk36Q69ZM6 1316 aa9.95□□□□□ -0.82
Trim40-203ENSMUST00000172711 Rnf19bA2A7Q9 732 aa9.95□□□□□ -0.82
Trim40-203ENSMUST00000172711 Gm44503E9PYU5 387 aa9.95□□□□□ -0.82
Trim40-203ENSMUST00000172711 PtpraP18052 829 aa9.95□□□□□ -0.82
Trim40-203ENSMUST00000172711 Prkar2bP31324 416 aa9.95□□□□□ -0.82
Trim40-203ENSMUST00000172711 Neurod6P48986 337 aa9.95□□□□□ -0.82
Trim40-203ENSMUST00000172711 Zfp953Q3UPV7 304 aa9.95□□□□□ -0.82
Trim40-203ENSMUST00000172711 Lamc2Q61092 1191 aa9.95□□□□□ -0.82
Trim40-203ENSMUST00000172711 Senp6Q6P7W0 1132 aa9.95□□□□□ -0.82
Trim40-203ENSMUST00000172711 Cracr2bQ80ZJ8 394 aa9.95□□□□□ -0.82
Trim40-203ENSMUST00000172711 Fam102bQ8BQS4 339 aa9.95□□□□□ -0.82
Trim40-203ENSMUST00000172711 Dnaaf4Q8R368 420 aa9.95□□□□□ -0.82
Trim40-203ENSMUST00000172711 Szt2A2A9C3 3431 aa9.95□□□□□ -0.82
Trim40-203ENSMUST00000172711 Myh2G3UW82 1942 aa9.95□□□□□ -0.82
Trim40-203ENSMUST00000172711 Adgra3Q7TT36 1310 aa9.94□□□□□ -0.82
Trim40-203ENSMUST00000172711 Krt28A6BLY7 462 aa9.94□□□□□ -0.82
Trim40-203ENSMUST00000172711 Pdzrn4E9PUZ9 1014 aa9.94□□□□□ -0.82
Trim40-203ENSMUST00000172711 TsksO54887 585 aa9.94□□□□□ -0.82
Trim40-203ENSMUST00000172711 Cyp2c37P56654 490 aa9.94□□□□□ -0.82
Trim40-203ENSMUST00000172711 Cwc27Q3TKY6 469 aa9.94□□□□□ -0.82
Trim40-203ENSMUST00000172711 Nlrp9aQ66X03 949 aa9.94□□□□□ -0.82
Trim40-203ENSMUST00000172711 Cyp2c54Q6XVG2 490 aa9.94□□□□□ -0.82
Trim40-203ENSMUST00000172711 Amer1Q7TS75 1132 aa9.94□□□□□ -0.82
Trim40-203ENSMUST00000172711 Ubap2lQ80X50 1107 aaKnown RBP9.94□□□□□ -0.82
Trim40-203ENSMUST00000172711 Gjc2Q8BQU6 440 aa9.94□□□□□ -0.82
Trim40-203ENSMUST00000172711 Cyp2c50Q91X77 490 aa9.94□□□□□ -0.82
Trim40-203ENSMUST00000172711 GrapQ9CX99 217 aa9.94□□□□□ -0.82
Trim40-203ENSMUST00000172711 Tjap1Q9DCD5 539 aa9.94□□□□□ -0.82
Trim40-203ENSMUST00000172711 Syngap1F6SEU4 1340 aa9.94□□□□□ -0.82
Trim40-203ENSMUST00000172711 Kdm3aQ6PCM1 1323 aa9.94□□□□□ -0.82
Trim40-203ENSMUST00000172711 Has3O08650 554 aa9.93□□□□□ -0.82
Trim40-203ENSMUST00000172711 Cntnap5bQ0V8T8 1292 aa9.93□□□□□ -0.82
Trim40-203ENSMUST00000172711 YdjcQ14BV6 310 aa9.93□□□□□ -0.82
Trim40-203ENSMUST00000172711 Fam196bQ6GQV1 535 aa9.93□□□□□ -0.82
Trim40-203ENSMUST00000172711 Maco1Q7TQE6 664 aaKnown RBP9.93□□□□□ -0.82
Trim40-203ENSMUST00000172711 Snapc2Q91XA5 359 aa9.93□□□□□ -0.82
Trim40-203ENSMUST00000172711 Sept12Q9D451 317 aa9.93□□□□□ -0.82
Trim40-203ENSMUST00000172711 Dnajb2Q9QYI5 324 aa9.93□□□□□ -0.82
Trim40-203ENSMUST00000172711 Fam205a1D3YZF6 1314 aa9.93□□□□□ -0.82
Trim40-203ENSMUST00000172711 DaxxO35613 739 aa9.92□□□□□ -0.82
Trim40-203ENSMUST00000172711 NfkbibQ60778 359 aa9.92□□□□□ -0.82
Trim40-203ENSMUST00000172711 Ppp4r3aQ6P2K6 820 aa9.92□□□□□ -0.82
Trim40-203ENSMUST00000172711 Traf7Q922B6 594 aa9.92□□□□□ -0.82
Trim40-203ENSMUST00000172711 Katnbl1Q9CWJ3 299 aa9.92□□□□□ -0.82
Trim40-203ENSMUST00000172711 Rbm6S4R1W5 1118 aaKnown RBP9.92□□□□□ -0.82
Trim40-203ENSMUST00000172711 Ms4a4aA0A087WRT7 236 aa9.92□□□□□ -0.82
Trim40-203ENSMUST00000172711 Gnai2P08752 355 aaKnown RBP9.92□□□□□ -0.82
Trim40-203ENSMUST00000172711 FlgP11088 336 aa9.92□□□□□ -0.82
Trim40-203ENSMUST00000172711 NefhP19246 1090 aa9.92□□□□□ -0.82
Trim40-203ENSMUST00000172711 SelpQ01102 768 aa9.92□□□□□ -0.82
Trim40-203ENSMUST00000172711 Nlrp1aQ2LKU9 1182 aa9.92□□□□□ -0.82
Trim40-203ENSMUST00000172711 4933416C03RikQ3V063 378 aa9.92□□□□□ -0.82
Trim40-203ENSMUST00000172711 Mov10l1Q99MV5 1187 aa9.92□□□□□ -0.82
Trim40-203ENSMUST00000172711 Ccdc81Q9D5W4 654 aa9.92□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms