RNA–Protein interactions for RNA: ENSMUST00000120580.7

Prpf39-201, Transcript of Pre-mRNA-processing factor 39, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Prpf39, Length 4,069 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39-201ENSMUST00000120580 Atp6v1aP50516 617 aaKnown RBP11.2□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Tmem67Q8BR76 992 aa11.2□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Adam1bQ8R534 806 aa11.2□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Ripk4Q9ERK0 786 aa11.2□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Flt1P35969 1333 aa11.2□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Plekhg2Q6KAU7 1340 aa11.2□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Ifi207E9Q3L4 978 aa11.2□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Hsp90b1P08113 802 aaKnown RBP11.2□□□□□ -0.62
Prpf39-201ENSMUST00000120580 RadxQ8C779 850 aa11.2□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Phf20l1Q8CCJ9 1013 aa11.2□□□□□ -0.62
Prpf39-201ENSMUST00000120580 NenfQ9CQ45 171 aa11.2□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Aox1O54754 1333 aa11.2□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Rc3h1Q4VGL6 1130 aaKnown RBP11.2□□□□□ -0.62
Prpf39-201ENSMUST00000120580 PRAG1Q571I4 1179 aa11.2□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Filip1lQ6P6L0 1131 aa11.2□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Cnot6lQ8VEG6 555 aa11.2□□□□□ -0.62
Prpf39-201ENSMUST00000120580 SrcapA0A087WQ44 3271 aa11.2□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Irf6P97431 467 aa11.2□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Ankrd13aQ80UP5 588 aa11.2□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Me3Q8BMF3 604 aa11.19□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Inpp5bQ8K337 993 aa11.19□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Pof1bQ8K4L4 587 aa11.19□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Dhx16G3X8X0 1044 aaKnown RBP11.19□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Ppef2O35385 757 aa11.19□□□□□ -0.62
Prpf39-201ENSMUST00000120580 CrkQ64010 304 aa11.19□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Ppp1r10Q80W00 888 aaKnown RBP11.19□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Tmx3Q8BXZ1 456 aa11.19□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Tbc1d7Q9D0K0 293 aa11.19□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Dynll2Q9D0M5 89 aa11.19□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Nova2D3YVV7 556 aaKnown RBP11.19□□□□□ -0.62
Prpf39-201ENSMUST00000120580 CfhP06909 1234 aa11.19□□□□□ -0.62
Prpf39-201ENSMUST00000120580 MslnlQ8C160 685 aa11.19□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Cry2Q9R194 592 aa11.19□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Prdm1Q60636 856 aa11.18□□□□□ -0.62
Prpf39-201ENSMUST00000120580 BrapQ99MP8 591 aa11.18□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Tob2Q9JM55 345 aa11.18□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Rfx1P48377 963 aa11.18□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Spg7Q3ULF4 781 aa11.18□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Epha10Q8BYG9 1007 aa11.18□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Rtn4Q99P72 1162 aaKnown RBP11.18□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Borcs6Q9D6W8 360 aa11.18□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Cnpy3Q9DAU1 276 aa11.18□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Suclg2Q9Z2I8 433 aa11.18□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Sgip1Q8VD37 806 aa11.18□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Ep400Q8CHI8 3072 aaKnown RBP11.17□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Magea6O89010 325 aa11.17□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Tmprss11eQ5S248 423 aa11.17□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Magea3Q6T340 320 aa11.17□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Stn1Q8K2X3 378 aa11.17□□□□□ -0.62
Prpf39-201ENSMUST00000120580 NsmfQ99NF2 532 aa11.17□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Phactr2B1AVP0 632 aa11.17□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Eef2P58252 858 aaKnown RBP11.17□□□□□ -0.62
Prpf39-201ENSMUST00000120580 RarsQ9D0I9 660 aaKnown RBP11.17□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Cyp26a1O55127 497 aa11.17□□□□□ -0.62
Prpf39-201ENSMUST00000120580 ThbdP15306 577 aa11.17□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Paf1Q8K2T8 535 aa11.17□□□□□ -0.62
Prpf39-201ENSMUST00000120580 CebpaP53566 359 aa11.16□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Lca5lQ8C0X0 741 aa11.16□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Pus7lQ8CE46 702 aa11.16□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Mad2l2Q9D752 211 aa11.16□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Plxnb3Q9QY40 1902 aa11.16□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Igsf9bE9PZ19 1328 aa11.16□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Usp31E9Q6Y8 1344 aa11.16□□□□□ -0.62
Prpf39-201ENSMUST00000120580 DnttP09838 530 aa11.16□□□□□ -0.62
Prpf39-201ENSMUST00000120580 QarsQ8BML9 775 aa11.16□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Txnrd2Q9JLT4 524 aa11.16□□□□□ -0.62
Prpf39-201ENSMUST00000120580 CnpP16330 420 aa11.16□□□□□ -0.62
Prpf39-201ENSMUST00000120580 PrimpolQ6P1E7 537 aa11.16□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Usp50Q6P8X6 390 aa11.16□□□□□ -0.62
Prpf39-201ENSMUST00000120580 VmacQ8BP01 174 aa11.16□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Sil1Q9EPK6 465 aa11.16□□□□□ -0.62
Prpf39-201ENSMUST00000120580 RabggtaQ9JHK4 567 aa11.16□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Mkrn1Q9QXP6 481 aa11.16□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Irgm2A0A140LIF8 407 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Ccng2O08918 344 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Lilrb3P97484 841 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Cnnm4Q69ZF7 771 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Gjd4Q8BSD4 364 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Onecut3Q8K557 490 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Zbtb43Q9DAI4 467 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Olfr247E9PVJ7 320 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Olfr819K7N727 320 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 PcQ05920 1178 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Lins1Q3U1D0 764 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Spty2d1Q68FG3 682 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Gm2163Q6PCY5 473 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Zfp317Q8C0Q5 607 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Q9D9S1 216 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Cdc45Q9Z1X9 566 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Zfp853A0A1D5RM95 733 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 En2P09066 324 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Wnt7aP24383 349 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Babam1Q3UI43 333 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Ell2Q3UKU1 639 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Tbc1d9bQ5SVR0 1263 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Glrx3Q9CQM9 337 aa11.15□□□□□ -0.62
Prpf39-201ENSMUST00000120580 Dennd3A2RT67 1274 aa11.14□□□□□ -0.63
Prpf39-201ENSMUST00000120580 Mboat4P0C7A3 435 aa11.14□□□□□ -0.63
Prpf39-201ENSMUST00000120580 Wnt10bP48614 389 aa11.14□□□□□ -0.63
Prpf39-201ENSMUST00000120580 Atxn7Q8R4I1 867 aa11.14□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms