RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Adgrb1Q3UHD1 1582 aa11.55□□□□□ -0.56
Ctc1-202ENSMUST00000116359 AppP12023 770 aa11.54□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Serpinb6dQ3UWK8 375 aa11.54□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Gas2l3Q3UWW6 683 aa11.54□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Ebag9Q9D0V7 213 aa11.54□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Naa16Q9DBB4 864 aa11.54□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Vstm4T1NXB5 319 aa11.54□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Gm15262A0A140LIQ5 728 aa11.54□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Camsap3Q80VC9 1252 aa11.54□□□□□ -0.56
Ctc1-202ENSMUST00000116359 NapgQ9CWZ7 312 aa11.54□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Riok3Q9DBU3 519 aaKnown RBP11.54□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Ybx3Q9JKB3 361 aaKnown RBP11.54□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Gkap1Q9JMB0 366 aa11.54□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Pfkfb1P70266 471 aa11.54□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Nxf7Q80SZ6 620 aaKnown RBP11.54□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Paip2Q9D6V8 124 aa11.54□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Slc52a2Q9D8F3 450 aa11.54□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Dctpp1Q9QY93 170 aa11.54□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Abcc12Q80WJ6 1366 aa11.54□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Ift172Q6VH22 1749 aa11.54□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Tubb4bP68372 445 aaKnown RBP11.53□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Skap2Q3UND0 358 aa11.53□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Ankrd24Q80VM7 985 aa11.53□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Ttc12Q8BW49 704 aa11.53□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Tubb6Q922F4 447 aa11.53□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Vnn1Q9Z0K8 512 aa11.53□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Spef2Q8C9J3 1734 aa11.53□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Tubb5P99024 444 aaKnown RBP11.53□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Ccdc181Q80ZU5 509 aa11.53□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Idi2Q8BFZ6 227 aa11.53□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Pde4bB1AWC9 736 aa11.53□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Top1Q04750 767 aaKnown RBP11.53□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Q3TQI7 289 aaKnown RBP11.53□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Ddx46Q569Z5 1032 aaKnown RBP11.53□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Tsr1Q5SWD9 803 aa11.53□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Brsk2Q69Z98 735 aa11.53□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Q8C5K5 320 aa11.53□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Rrs1Q9CYH6 365 aaKnown RBP11.53□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Snx1Q9WV80 522 aa11.53□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Cdc27A2A6Q5 825 aa11.52□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Slc12a2P55012 1205 aa11.52□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Tab3Q571K4 716 aa11.52□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Asnsd1Q8BFS9 627 aa11.52□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Rec8Q8C5S7 591 aa11.52□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Snap23O09044 210 aa11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Sptlc2P97363 560 aaKnown RBP11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Mrps31Q61733 384 aaKnown RBP11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Ctdp1Q7TSG2 960 aa11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Bpifb6Q8BU51 449 aa11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Vmn1r218Q8R261 298 aa11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Znf445Q8R2V3 986 aa11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Mical1Q8VDP3 1048 aa11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 AdarQ99MU3 1178 aaKnown RBP11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Klhl40Q9D783 621 aa11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Akap8Q9DBR0 687 aaKnown RBP11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Telo2Q9DC40 840 aaKnown RBP11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Entpd5Q9WUZ9 427 aa11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Cdk19Q8BWD8 501 aa11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Sash3Q8K352 380 aa11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Eif3hQ91WK2 352 aaKnown RBP11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Six6os1Q9CTN5 574 aa11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Hsd3b7Q9EQC1 369 aa11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Irgm2A0A140LIF8 407 aa11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Gm10471E9Q1C7 252 aa11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Rgs9O54828 675 aa11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Tubb2aQ7TMM9 445 aa11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Tcp11l1Q8BTG3 509 aa11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Tubb2bQ9CWF2 445 aa11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Psrc1Q9D0P7 329 aa11.52□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Carmil3Q3UFQ8 1375 aa11.51□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Gm43638A0A0J9YU36 694 aa11.51□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Enc1O35709 589 aa11.51□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Nkx2-5P42582 318 aa11.51□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Sem1P60897 70 aa11.51□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Leng8Q8CBY3 785 aaKnown RBP11.51□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Erc1Q99MI1 1120 aa11.51□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Ccdc97Q9DBT3 340 aa11.51□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Zfy1P10925 782 aa11.51□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Krt86P97861 486 aa11.51□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Nlrp4cQ3TKR3 982 aa11.51□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Mettl5Q8K1A0 209 aa11.51□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Gm5624F6ZZG8 207 aa11.51□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Il27raO70394 623 aa11.51□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Esyt3Q5DTI8 891 aa11.51□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Sh3gl2Q62420 352 aa11.51□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Disp3A3KFU9 1347 aa11.5□□□□□ -0.57
Ctc1-202ENSMUST00000116359 PrphP15331 475 aa11.5□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Impdh2P24547 514 aa11.5□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Washc4Q3UMB9 1173 aa11.5□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Rc3h1Q4VGL6 1130 aaKnown RBP11.5□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Sugt1Q9CX34 336 aa11.5□□□□□ -0.57
Ctc1-202ENSMUST00000116359 IkbkbO88351 757 aa11.5□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Pa2g4P50580 394 aaKnown RBP11.5□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Myo1fP70248 1099 aa11.5□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Gsdma2Q32M21 443 aa11.5□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Mum1l1Q4VA55 681 aa11.5□□□□□ -0.57
Ctc1-202ENSMUST00000116359 TmpoQ61033 693 aaKnown RBP11.5□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Rassf2Q8BMS9 326 aa11.5□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Tldc1Q8K0P3 455 aa11.5□□□□□ -0.57
Ctc1-202ENSMUST00000116359 Dnajc28Q8VCE1 385 aa11.5□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms