RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Fsip1Q9D3V5 435 aa12.4□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Krt7Q9DCV7 457 aa12.4□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Col4a3bpQ9EQG9 624 aa12.4□□□□□ -0.42
Scn8a-203ENSMUST00000108908 DonsonQ9QXP4 560 aa12.4□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Rpl13P47963 211 aaKnown RBP12.4□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Armc2Q3URY6 854 aa12.4□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Taf5lQ91WQ5 589 aa12.4□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Tsnaxip1Q99P25 704 aa12.4□□□□□ -0.42
Scn8a-203ENSMUST00000108908 AnkarA2RT91 1465 aa12.4□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Caprin2Q05A80 1031 aaKnown RBP12.4□□□□□ -0.43
Scn8a-203ENSMUST00000108908 MpndQ3TV65 487 aa12.4□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Wdr93Q402B2 695 aa12.4□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Nap1l4Q78ZA7 375 aaKnown RBP12.4□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Lin9Q8C735 542 aa12.4□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Dnajc25A2ALW5 357 aa12.39□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Cyp26a1O55127 497 aa12.39□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Traf3ip3Q8C0G2 513 aa12.39□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Acot11Q8VHQ9 594 aa12.39□□□□□ -0.43
Scn8a-203ENSMUST00000108908 FibpQ9JI19 357 aa12.39□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Prdm11A2AGX3 565 aa12.39□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Mtss1lQ6P9S0 715 aa12.39□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Dis3l2Q8CI75 870 aaKnown RBP12.39□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Mx2Q9WVP9 655 aa12.39□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Gm45015A0A140LII9 184 aa12.39□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Cnksr1A2A9K7 700 aa12.39□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Pus7B7ZNL8 666 aaKnown RBP12.39□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Morc2aQ69ZX6 1030 aa12.39□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Emilin1Q99K41 1017 aa12.39□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Ccdc162pQ0VG85 912 aa12.39□□□□□ -0.43
Scn8a-203ENSMUST00000108908 L1td1Q587J6 782 aaKnown RBP12.39□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Skor2A7M7C7 1008 aa12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Gucy1b3O54865 620 aa12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Pak1O88643 545 aa12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Pold4Q9CWP8 107 aa12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Rbm33Q9CXK9 1231 aaKnown RBP12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Sorbs3Q9R1Z8 733 aa12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Slc35g1Q8BY79 368 aa12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Yars2Q8BYL4 472 aaKnown RBP12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Gtf2iQ9ESZ8 998 aaKnown RBP12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Ftl2P49945 183 aa12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Frat1P70339 274 aa12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Kdm4cQ8VCD7 1054 aa12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Tnnc1P19123 161 aa12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Spata18Q0P557 537 aa12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Ccdc129Q14B48 1034 aa12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 CtcfQ61164 736 aaKnown RBP12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Ccdc189Q6NZQ0 333 aa12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Asic2Q925H0 512 aa12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Nlrx1Q3TL44 975 aa12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Gramd4Q8CB44 633 aa12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Pcdhb2Q91Y00 799 aa12.38□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Tbc1d9bQ5SVR0 1263 aa12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Nod2Q8K3Z0 1020 aa12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Il4rP16382 810 aa12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Gsta4P24472 222 aa12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Lrrd1Q8C0R9 853 aa12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Fam204aQ8C6C7 236 aa12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Stn1Q8K2X3 378 aa12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Nop2Q922K7 793 aaKnown RBP12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Gm44503E9PYU5 387 aa12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Atp1a2Q6PIE5 1020 aa12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Nxf1Q99JX7 618 aaKnown RBP12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Gm2030D3Z7C4 212 aa12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Leo1Q5XJE5 667 aa12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Arhgef2Q60875 985 aa12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Lztfl1Q9JHQ5 299 aa12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Cpb1B2RS76 415 aa12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Atp6v0a2P15920 856 aa12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Zbtb38Q3LR78 1197 aa12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 HmcesQ8R1M0 353 aaKnown RBP12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Arl1P61211 181 aa12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Nlrp1aQ2LKU9 1182 aa12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 NelfbQ8C4Y3 580 aa12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Slc18a1Q8R090 521 aa12.37□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Tspyl1O88852 379 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 GabpaQ00422 454 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Ifit1Q64282 463 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Map3k11Q80XI6 850 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Cabp7Q91ZM8 215 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Col20a1Q923P0 1320 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Atp10aO54827 1508 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Znf568E9PYI1 671 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Kifap3P70188 793 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Eya3P97480 510 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Tgfb1i1Q62219 461 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Fam43aQ8BUP8 424 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Cap2Q9CYT6 476 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Stx17Q9D0I4 301 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Oas2E9Q9A9 742 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 GancQ8BVW0 898 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Hdac6Q9Z2V5 1149 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Traf1P39428 409 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Dcaf5Q80T85 946 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Myl7Q9QVP4 175 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Chl1P70232 1209 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Hps4Q99KG7 671 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Mroh2aD3Z750 1679 aa12.36□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Gm3409A0A0G2JE67 319 aa12.35□□□□□ -0.43
Scn8a-203ENSMUST00000108908 CoilQ5SU73 570 aa12.35□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Smim5Q8BT42 78 aa12.35□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 262.9 ms