RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Gtpbp4Q99ME9 634 aaKnown RBP21.15■□□□□ 0.98
Trim47-202ENSMUST00000106441 ParvgQ9ERD8 331 aa21.15■□□□□ 0.98
Trim47-202ENSMUST00000106441 Sall1Q9ER74 1322 aa21.15■□□□□ 0.98
Trim47-202ENSMUST00000106441 Cep63Q3UPP8 700 aa21.14■□□□□ 0.98
Trim47-202ENSMUST00000106441 TrhQ62361 256 aa21.14■□□□□ 0.98
Trim47-202ENSMUST00000106441 Atp1a3Q6PIC6 1013 aa21.14■□□□□ 0.98
Trim47-202ENSMUST00000106441 Ufl1Q8CCJ3 793 aaKnown RBP21.14■□□□□ 0.98
Trim47-202ENSMUST00000106441 Terf2ipQ91VL8 393 aa21.14■□□□□ 0.98
Trim47-202ENSMUST00000106441 Zkscan5Q9Z1D8 819 aa21.14■□□□□ 0.98
Trim47-202ENSMUST00000106441 Gm29094F6Q785 221 aa21.14■□□□□ 0.97
Trim47-202ENSMUST00000106441 Atp2b1G5E829 1220 aa21.14■□□□□ 0.97
Trim47-202ENSMUST00000106441 Ubxn2bQ0KL01 331 aa21.14■□□□□ 0.97
Trim47-202ENSMUST00000106441 Hnrnpul1Q8VDM6 859 aaKnown RBP21.14■□□□□ 0.97
Trim47-202ENSMUST00000106441 Cd248Q91V98 765 aa21.14■□□□□ 0.97
Trim47-202ENSMUST00000106441 Yeats4Q9CR11 227 aaKnown RBP21.14■□□□□ 0.97
Trim47-202ENSMUST00000106441 MthfsQ9D110 203 aa21.14■□□□□ 0.97
Trim47-202ENSMUST00000106441 Card6E9PWH2 1175 aa21.13■□□□□ 0.97
Trim47-202ENSMUST00000106441 Pald1P70261 859 aa21.13■□□□□ 0.97
Trim47-202ENSMUST00000106441 Ell2Q3UKU1 639 aa21.13■□□□□ 0.97
Trim47-202ENSMUST00000106441 Sptlc3Q8BG54 563 aa21.13■□□□□ 0.97
Trim47-202ENSMUST00000106441 Tmem87aQ8BXN9 555 aa21.13■□□□□ 0.97
Trim47-202ENSMUST00000106441 Stac3Q8BZ71 360 aa21.13■□□□□ 0.97
Trim47-202ENSMUST00000106441 Ttc5Q99LG4 440 aa21.13■□□□□ 0.97
Trim47-202ENSMUST00000106441 Ltn1Q6A009 1767 aa21.13■□□□□ 0.97
Trim47-202ENSMUST00000106441 Dhx8A2A4P0 1244 aaKnown RBP21.13■□□□□ 0.97
Trim47-202ENSMUST00000106441 Olfr247E9PVJ7 320 aa21.13■□□□□ 0.97
Trim47-202ENSMUST00000106441 Olfr819K7N727 320 aa21.13■□□□□ 0.97
Trim47-202ENSMUST00000106441 Rad23bP54728 416 aa21.13■□□□□ 0.97
Trim47-202ENSMUST00000106441 Bend4P86174 541 aa21.13■□□□□ 0.97
Trim47-202ENSMUST00000106441 ImmtQ8CAQ8 757 aaKnown RBP21.13■□□□□ 0.97
Trim47-202ENSMUST00000106441 CenpqQ9CPQ5 267 aa21.13■□□□□ 0.97
Trim47-202ENSMUST00000106441 Cyp2d34L7N463 504 aa21.12■□□□□ 0.97
Trim47-202ENSMUST00000106441 ErmnQ5EBJ4 281 aa21.12■□□□□ 0.97
Trim47-202ENSMUST00000106441 Spty2d1Q68FG3 682 aa21.12■□□□□ 0.97
Trim47-202ENSMUST00000106441 Best3Q6H1V1 669 aa21.12■□□□□ 0.97
Trim47-202ENSMUST00000106441 Stk38Q91VJ4 465 aa21.12■□□□□ 0.97
Trim47-202ENSMUST00000106441 Nop2Q922K7 793 aaKnown RBP21.12■□□□□ 0.97
Trim47-202ENSMUST00000106441 Sh3bp5lQ99LH9 392 aa21.12■□□□□ 0.97
Trim47-202ENSMUST00000106441 Gdf11Q9Z1W4 405 aa21.12■□□□□ 0.97
Trim47-202ENSMUST00000106441 Setdb1O88974 1307 aa21.12■□□□□ 0.97
Trim47-202ENSMUST00000106441 Rgs12Q8CGE9 1381 aa21.12■□□□□ 0.97
Trim47-202ENSMUST00000106441 U2af1l4Q8BGJ9 220 aa21.12■□□□□ 0.97
Trim47-202ENSMUST00000106441 Golph3lQ8R088 285 aaKnown RBP21.12■□□□□ 0.97
Trim47-202ENSMUST00000106441 Mei1Q9D4I2 1268 aa21.12■□□□□ 0.97
Trim47-202ENSMUST00000106441 Anks1aP59672 1150 aa21.11■□□□□ 0.97
Trim47-202ENSMUST00000106441 Riok1Q922Q2 567 aa21.11■□□□□ 0.97
Trim47-202ENSMUST00000106441 Fam84aQ9D650 292 aa21.11■□□□□ 0.97
Trim47-202ENSMUST00000106441 Cnpy2Q9QXT0 182 aa21.11■□□□□ 0.97
Trim47-202ENSMUST00000106441 Btaf1E9QAE3 1848 aa21.1■□□□□ 0.97
Trim47-202ENSMUST00000106441 Mrps5Q99N87 432 aaKnown RBP21.1■□□□□ 0.97
Trim47-202ENSMUST00000106441 TnksQ6PFX9 1320 aa21.1■□□□□ 0.97
Trim47-202ENSMUST00000106441 Cyp3a57D3YYZ0 503 aa21.1■□□□□ 0.97
Trim47-202ENSMUST00000106441 Ythdc1E9Q5K9 736 aaKnown RBP21.1■□□□□ 0.97
Trim47-202ENSMUST00000106441 Ercc6lQ8BHK9 1240 aa21.1■□□□□ 0.97
Trim47-202ENSMUST00000106441 Arid5bQ8BM75 1188 aaKnown RBP21.1■□□□□ 0.97
Trim47-202ENSMUST00000106441 Ankrd1Q9CR42 319 aa21.1■□□□□ 0.97
Trim47-202ENSMUST00000106441 Fam114a1Q9D281 569 aa21.1■□□□□ 0.97
Trim47-202ENSMUST00000106441 Ccng2O08918 344 aa21.09■□□□□ 0.97
Trim47-202ENSMUST00000106441 PnnO35691 725 aaKnown RBP21.09■□□□□ 0.97
Trim47-202ENSMUST00000106441 XpcP51612 930 aa21.09■□□□□ 0.97
Trim47-202ENSMUST00000106441 Rhbdl3P58873 404 aa21.09■□□□□ 0.97
Trim47-202ENSMUST00000106441 Zhx1P70121 873 aa21.09■□□□□ 0.97
Trim47-202ENSMUST00000106441 Gm28047Q3US59 414 aa21.09■□□□□ 0.97
Trim47-202ENSMUST00000106441 Ltv1Q6NSQ7 470 aaKnown RBP21.09■□□□□ 0.97
Trim47-202ENSMUST00000106441 Trim56Q80VI1 734 aaKnown RBP21.09■□□□□ 0.97
Trim47-202ENSMUST00000106441 Fam160b2Q80YR2 744 aa21.09■□□□□ 0.97
Trim47-202ENSMUST00000106441 Gtf3c5Q8R2T8 520 aa21.09■□□□□ 0.97
Trim47-202ENSMUST00000106441 Sik3Q6P4S6 1311 aa21.09■□□□□ 0.97
Trim47-202ENSMUST00000106441 Gm43638A0A0J9YU36 694 aa21.09■□□□□ 0.97
Trim47-202ENSMUST00000106441 TfrcQ62351 763 aaKnown RBP21.09■□□□□ 0.97
Trim47-202ENSMUST00000106441 Nlrp9aQ66X03 949 aa21.09■□□□□ 0.97
Trim47-202ENSMUST00000106441 PrimpolQ6P1E7 537 aa21.09■□□□□ 0.97
Trim47-202ENSMUST00000106441 Cep55Q8BT07 462 aa21.09■□□□□ 0.97
Trim47-202ENSMUST00000106441 Camkk2Q8C078 588 aa21.09■□□□□ 0.97
Trim47-202ENSMUST00000106441 Luzp1Q8R4U7 1068 aaKnown RBP21.09■□□□□ 0.97
Trim47-202ENSMUST00000106441 Sptlc2P97363 560 aaKnown RBP21.08■□□□□ 0.97
Trim47-202ENSMUST00000106441 Chrna5Q2MKA5 467 aa21.08■□□□□ 0.97
Trim47-202ENSMUST00000106441 SdsQ8VBT2 327 aa21.08■□□□□ 0.97
Trim47-202ENSMUST00000106441 4930548H24RikQ9D496 437 aa21.08■□□□□ 0.97
Trim47-202ENSMUST00000106441 Irs4Q9Z0Y7 1216 aa21.08■□□□□ 0.97
Trim47-202ENSMUST00000106441 Myh15E9Q264 1925 aa21.08■□□□□ 0.96
Trim47-202ENSMUST00000106441 Atp6v1aP50516 617 aaKnown RBP21.07■□□□□ 0.96
Trim47-202ENSMUST00000106441 Tpm1P58771 284 aa21.07■□□□□ 0.96
Trim47-202ENSMUST00000106441 Sox30Q8CGW4 782 aa21.07■□□□□ 0.96
Trim47-202ENSMUST00000106441 Ulbp1Q8HWA3 334 aa21.07■□□□□ 0.96
Trim47-202ENSMUST00000106441 Appbp2Q9DAX9 585 aa21.07■□□□□ 0.96
Trim47-202ENSMUST00000106441 Clic4Q9QYB1 253 aa21.07■□□□□ 0.96
Trim47-202ENSMUST00000106441 Surf1P09925 306 aa21.07■□□□□ 0.96
Trim47-202ENSMUST00000106441 Tshz1Q5DTH5 1084 aa21.07■□□□□ 0.96
Trim47-202ENSMUST00000106441 Alg3Q8K2A8 438 aa21.07■□□□□ 0.96
Trim47-202ENSMUST00000106441 Mrpl12Q9DB15 201 aaKnown RBP21.07■□□□□ 0.96
Trim47-202ENSMUST00000106441 Vmn2r23E9PXI5 849 aa21.06■□□□□ 0.96
Trim47-202ENSMUST00000106441 Znf326O88291 580 aa21.06■□□□□ 0.96
Trim47-202ENSMUST00000106441 Tmem59lQ7TNI2 337 aa21.06■□□□□ 0.96
Trim47-202ENSMUST00000106441 Nrxn2E9Q7X7 1710 aa21.06■□□□□ 0.96
Trim47-202ENSMUST00000106441 Klrk1O54709 232 aa21.06■□□□□ 0.96
Trim47-202ENSMUST00000106441 Frat1P70339 274 aa21.06■□□□□ 0.96
Trim47-202ENSMUST00000106441 Ap5z1Q3U829 807 aa21.06■□□□□ 0.96
Trim47-202ENSMUST00000106441 Insm1Q63ZV0 521 aa21.06■□□□□ 0.96
Trim47-202ENSMUST00000106441 Abtb2Q7TQI7 1024 aa21.06■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms