RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Ncf1Q09014 390 aa11.68□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Rbm19Q8R3C6 952 aaKnown RBP11.68□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Pcdhb22Q91XZ8 794 aa11.68□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Prkg1P0C605 671 aa11.68□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Q3UJP5 209 aa11.68□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Glrx3Q9CQM9 337 aa11.68□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Gm36210A0A1B0GS00 229 aa11.68□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Ano3A2AHL1 981 aa11.68□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Flvcr1B2RXV4 560 aa11.68□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Ces1hD3Z298 562 aa11.68□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Terf2O35144 541 aa11.68□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Adam7O35227 789 aa11.68□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Cnnm2Q3TWN3 875 aa11.68□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 DaglaQ6WQJ1 1044 aa11.68□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Sp8Q8BMJ8 486 aa11.68□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Ndufv1Q91YT0 464 aa11.68□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Cyp3a59D3Z2W7 503 aa11.67□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Zbtb21E9Q444 1094 aa11.67□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Wnt10bP48614 389 aa11.67□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 NyxP83503 476 aa11.67□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 NogP97466 232 aa11.67□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 LdhdQ7TNG8 484 aa11.67□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Ccp110Q7TSH4 1004 aa11.67□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Rbm6S4R1W5 1118 aaKnown RBP11.67□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Prss51A0A286YDY8 319 aa11.67□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Casq1O09165 405 aa11.67□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Q3TYL0 343 aa11.67□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Cnot7Q60809 285 aa11.67□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Tnip1Q9WUU8 647 aa11.67□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Myh7Q91Z83 1935 aa11.67□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Atp6v1dP57746 247 aa11.67□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Tmem39bQ810L4 492 aa11.67□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Myh13B1AR69 1938 aa11.67□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Plekhg2Q6KAU7 1340 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Kcnb2A6H8H5 907 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Slc27a3O88561 667 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Syt1P46096 421 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Pald1P70261 859 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Psen2Q61144 448 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Cep131Q62036 1060 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 GnptabQ69ZN6 1235 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Trmt2aQ8BNV1 574 aaKnown RBP11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Tmem79Q9D709 391 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 WtapQ9ER69 396 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Dpp7Q9ET22 506 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Clip2Q9Z0H8 1047 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 CpdO89001 1377 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 CnpP16330 420 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Usp50Q6P8X6 390 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Kbtbd13Q8C828 458 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Lman1lQ8VCD3 505 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Smc3Q9CW03 1217 aaKnown RBP11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Prr16A3KMN5 304 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Vmn2r68L7N2B3 851 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Rc3h1Q4VGL6 1130 aaKnown RBP11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Lamc2Q61092 1191 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Cdk8Q8R3L8 464 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Suclg2Q9Z2I8 433 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Igf2rQ07113 2483 aaKnown RBP11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Pnpla6Q3TRM4 1355 aa11.66□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Rnf123Q5XPI3 1314 aa11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Arfgef1G3X9K3 1846 aaKnown RBP11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Eya3P97480 510 aa11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Lins1Q3U1D0 764 aa11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Klhdc9Q3USL1 350 aa11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Cpa2Q504N0 417 aa11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Tacc1Q6Y685 774 aa11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Casp12O08736 419 aa11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Oog3Q3UWY1 500 aa11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 DlatQ8BMF4 642 aa11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Ccdc47Q9D024 483 aaKnown RBP11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Borcs6Q9D6W8 360 aa11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Plagl1Q9JLQ4 704 aa11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Med23Q80YQ2 1367 aa11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Tcof1O08784 1320 aaKnown RBP11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Nrxn2E9Q7X7 1710 aa11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Pde6aP27664 859 aa11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Dpp8Q80YA7 892 aa11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Ncaph2Q8BSP2 607 aa11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 PaoxQ8C0L6 504 aa11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Spon1Q8VCC9 807 aa11.65□□□□□ -0.54
Ccdc38-201ENSMUST00000092215 Fam186bD3Z420 943 aa11.64□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Stat1P42225 749 aa11.64□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Usp5P56399 858 aaKnown RBP11.64□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Klrg2Q3UM83 387 aa11.64□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 QarsQ8BML9 775 aa11.64□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Mboat7Q8CHK3 473 aa11.64□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Ascc2Q91WR3 749 aa11.64□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Npr3P70180 536 aa11.64□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Tigd5Q499M4 642 aa11.64□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Rbm28Q8CGC6 750 aaKnown RBP11.64□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Ubxn2aQ99KJ0 258 aa11.64□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Gdpd2Q9ESM6 539 aa11.64□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Col5a2Q3U962 1497 aa11.64□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Chd5A2A8L1 1946 aa11.64□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Tbc1d9bQ5SVR0 1263 aa11.64□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 St18Q80TY4 1045 aa11.64□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Ift74Q8BKE9 600 aa11.64□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Ppil2Q9D787 521 aa11.64□□□□□ -0.55
Ccdc38-201ENSMUST00000092215 Vmn2r23E9PXI5 849 aa11.63□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms