RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Morc4Q8BMD7 928 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Trim14Q8BVW3 440 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Spats2Q8K1N4 545 aaKnown RBP10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Pnpt1Q8K1R3 783 aaKnown RBP10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Golga5Q9QYE6 729 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Gbp6A0A0G2JDV3 611 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Atp2b1G5E829 1220 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Gm43302L7N1X8 611 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Eif5P59325 429 aaKnown RBP10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Lrrc27Q80YS5 523 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Acat1Q8QZT1 424 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Ndufaf7Q9CWG8 436 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Nfkb2Q9WTK5 899 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Pla2g4bP0C871 782 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Pde6aP27664 859 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Adcy5P84309 1262 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Bbof1Q3V079 533 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Nup62Q63850 526 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Nlrp9bQ66X22 1003 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Ccdc169Q8BXX9 214 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Nuf2Q99P69 463 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Tceal6Q9DB24 200 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Plcb1Q9Z1B3 1216 aa10.04□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Ccdc125Q5U465 500 aa10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 GnalQ8CGK7 381 aa10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Clstn2Q9ER65 966 aa10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 FanciQ8K368 1330 aa10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Sycp3P70281 254 aa10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 BegainQ68EF6 600 aa10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Crybg3Q80W49 1005 aa10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Fam163aQ8CAA5 168 aa10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Yeats4Q9CR11 227 aaKnown RBP10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Chmp4cQ9D7F7 232 aa10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Daam2Q80U19 1115 aa10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Upf1Q9EPU0 1124 aaKnown RBP10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Gm28961A0A087WPA5 222 aa10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Gm21858A0A087WQ24 222 aa10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Nedd4P46935 887 aaKnown RBP10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Pold1P52431 1105 aa10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Fam107bQ3TGF2 131 aa10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Cdc37Q61081 379 aa10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Sdccag8Q80UF4 717 aa10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Srp68Q8BMA6 625 aaKnown RBP10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Zmynd15Q8C0R7 736 aa10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Lsm14bQ8CGC4 385 aaKnown RBP10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Sugp1Q8CH02 643 aaKnown RBP10.03□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Zbtb10E9Q8X5 861 aa10.02□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Leo1Q5XJE5 667 aa10.02□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Sh3d21Q7TSG5 549 aa10.02□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Slc20a2Q80UP8 656 aa10.02□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Rapgef5Q8C0Q9 814 aa10.02□□□□□ -0.8
Clcn3-202ENSMUST00000056508 MpstQ99J99 297 aa10.02□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Trim42Q9D2H5 723 aa10.02□□□□□ -0.8
Clcn3-202ENSMUST00000056508 Sun1Q9D666 913 aaKnown RBP10.02□□□□□ -0.8
Clcn3-202ENSMUST00000056508 PigoQ9JJI6 1093 aa10.02□□□□□ -0.8
Clcn3-202ENSMUST00000056508 PygmQ9WUB3 842 aaKnown RBP10.02□□□□□ -0.8
Clcn3-202ENSMUST00000056508 PdynO35417 248 aa10.02□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Pcsk2P21661 637 aa10.02□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Cep126Q0VBV7 1103 aa10.02□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Gtpbp6Q3U6U5 514 aa10.02□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Calcoco1Q8CGU1 691 aa10.02□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Atp6v1b1Q91YH6 513 aa10.02□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Dcaf1Q80TR8 1506 aa10.02□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Lrrc10bG3XA50 292 aa10.02□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Cyp2c37P56654 490 aa10.02□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Kctd21Q3URF8 260 aa10.02□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Taf1cQ6PDZ2 836 aa10.02□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Atp6v1hQ8BVE3 483 aa10.02□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Dpp9Q8BVG4 862 aa10.02□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Aldh1l1Q8R0Y6 902 aa10.02□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Zmynd11Q8R5C8 602 aa10.02□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Iqca1lA6H690 825 aa10.02□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Clk2O35491 499 aa10.02□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Cdh24Q6PFX6 781 aa10.02□□□□□ -0.81
Clcn3-202ENSMUST00000056508 SpastQ9QYY8 614 aa10.02□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Epb41l2O70318 988 aaKnown RBP10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Spag5Q7TME2 1165 aa10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Fam210aQ8BGY7 273 aa10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 ReltQ8BX43 436 aa10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Sik2Q8CFH6 931 aa10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Vps36Q91XD6 386 aa10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Spaca7Q9D2S4 182 aa10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Dydc2Q9D3X8 139 aa10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Trim34bJ3QNR8 485 aa10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Ccdc93Q7TQK5 629 aa10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Arhgef38Q80VK6 770 aa10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Trim34aQ99PP6 485 aa10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Cib2Q9Z309 187 aa10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 GnpatP98192 678 aa10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Madcam1Q61826 405 aa10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 6820408C15RikQ8BJX2 354 aa10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Ppil4Q9CXG3 492 aaKnown RBP10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Pdha2P35487 391 aa10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Ssrp1Q08943 708 aaKnown RBP10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Tbc1d9Q3UYK3 1264 aa10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Akap4Q60662 849 aa10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Tmem164Q6PHN7 296 aa10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Ddx54Q8K4L0 874 aaKnown RBP10.01□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Cyp4a12bA2A974 508 aa10□□□□□ -0.81
Clcn3-202ENSMUST00000056508 Ube3aO08759 870 aa10□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms