RNA–Protein interactions for RNA: ENSMUST00000054588.14

Col9a1-201, Transcript of Collagen alpha-1(IX) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a1, Length 3,834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-201ENSMUST00000054588 Vmn2r23E9PXI5 849 aa12.32□□□□□ -0.44
Col9a1-201ENSMUST00000054588 TfrcQ62351 763 aaKnown RBP12.32□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Panx2Q6IMP4 677 aa12.32□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Mylk2Q8VCR8 613 aa12.32□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Mrc1Q61830 1456 aa12.32□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Ccng2O08918 344 aa12.32□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Dynll1P63168 89 aa12.32□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Pfkfb1P70266 471 aa12.32□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Tekt3Q6X6Z7 490 aa12.32□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Ccdc96Q9CR92 584 aa12.32□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Mast3Q3U214 1321 aa12.32□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Pde8bE9Q4S1 865 aa12.32□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Slc1a4O35874 532 aa12.32□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Znf18Q810A1 556 aa12.32□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Dph6Q9CQ28 267 aa12.32□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Zkscan5Q9Z1D8 819 aa12.32□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Wnk3Q80XP9 1757 aa12.32□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Cyp2d34L7N463 504 aa12.31□□□□□ -0.44
Col9a1-201ENSMUST00000054588 GmnnO88513 206 aa12.31□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Kcnd1Q03719 651 aa12.31□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Pex1Q5BL07 1284 aa12.31□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Islr2Q5RKR3 745 aa12.31□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Pm20d1Q8C165 503 aa12.31□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Vps33aQ9D2N9 598 aa12.31□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Celf1P28659 486 aaKnown RBP12.31□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Usp5P56399 858 aaKnown RBP12.31□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Kmt5bQ3U8K7 883 aa12.31□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Sun3Q5SS91 320 aa12.31□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Trim11Q99PQ2 467 aa12.31□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Suclg2Q9Z2I8 433 aa12.31□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Ktn1Q61595 1327 aaKnown RBP12.31□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Cyp26a1O55127 497 aa12.31□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Surf1P09925 306 aa12.31□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Ccdc150Q8CDI7 1110 aa12.31□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Wasf1Q8R5H6 559 aa12.31□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Hps3Q91VB4 1002 aa12.31□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Dapk3O54784 448 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Cyp19a1P28649 503 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Large2Q5XPT3 690 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Ces3aQ63880 571 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Kiaa1524Q8BWY9 907 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Amigo3Q8C2S7 508 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Ces3bQ8VCU1 571 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Ginm1Q91WR6 327 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 A0A1L1SQF0 893 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Calcoco2A2A6M5 331 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Prr16A3KMN5 304 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Epb41l2O70318 988 aaKnown RBP12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Wdr70Q3TWF6 657 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Mns1Q61884 491 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Spag5Q7TME2 1165 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Clic6Q8BHB9 596 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Rtn1Q8K0T0 780 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Chaf1aQ9QWF0 911 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Ampd3O08739 766 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Usp53P15975 1069 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Plcb3P51432 1234 aaKnown RBP12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 March6Q6ZQ89 909 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Tmem59lQ7TNI2 337 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Mxd3Q80US8 206 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Ranbp6Q8BIV3 1105 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Alg3Q8K2A8 438 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Abca3Q8R420 1704 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Ube3bQ9ES34 1070 aa12.3□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Sdc2P43407 202 aa12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Gm30191A0A0U1RNT7 187 aa12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Rsph10bE9PYQ0 876 aa12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Nfil3O08750 462 aa12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Map10Q8BJS7 891 aa12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Alx1Q8C8B0 326 aa12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Elf2Q9JHC9 593 aa12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Dctpp1Q9QY93 170 aa12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 FocadA2AKG8 1798 aa12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Pcdhb9E9Q5G2 828 aa12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Slurp2P0DP59 97 aa12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Ap5z1Q3U829 807 aa12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 PsdQ5DTT2 1024 aa12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Sec62Q8BU14 398 aaKnown RBP12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Sox30Q8CGW4 782 aa12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Ces1dQ8VCT4 565 aa12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Ddx41Q91VN6 622 aaKnown RBP12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Gpr108Q91WD0 569 aa12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Eaf2Q91ZD6 262 aa12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Dhx30Q99PU8 1217 aaKnown RBP12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Atp12aQ9Z1W8 1035 aa12.29□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Krt24A1L317 512 aa12.28□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Pramel3A2AHA7 463 aa12.28□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Gm7903A2AWL1 463 aa12.28□□□□□ -0.44
Col9a1-201ENSMUST00000054588 AV320801A2AWL3 467 aa12.28□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Gm15023L7MUB4 467 aa12.28□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Ppfibp2O35711 882 aa12.28□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Tlr8P58682 1032 aa12.28□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Glg1Q61543 1175 aaKnown RBP12.28□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Otop3Q80UF9 577 aa12.28□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Olfm5Q8BU90 496 aa12.28□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Bola3Q8CEI1 110 aa12.28□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Znf131Q8K3J5 619 aa12.28□□□□□ -0.44
Col9a1-201ENSMUST00000054588 UvssaQ9D479 717 aa12.28□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Kcnq5Q9JK45 933 aa12.28□□□□□ -0.44
Col9a1-201ENSMUST00000054588 Prl3d1P18121 224 aa12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms