RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 AdgbG3UZ78 1657 aa17.16■□□□□ 0.34
Usp4-201ENSMUST00000035237 TsksO54887 585 aa17.16■□□□□ 0.34
Usp4-201ENSMUST00000035237 C87499Q3UX49 493 aa17.16■□□□□ 0.34
Usp4-201ENSMUST00000035237 Smg7Q5RJH6 1138 aaKnown RBP17.16■□□□□ 0.34
Usp4-201ENSMUST00000035237 Hpcal4Q8BGZ1 191 aa17.16■□□□□ 0.34
Usp4-201ENSMUST00000035237 Rbm19Q8R3C6 952 aaKnown RBP17.16■□□□□ 0.34
Usp4-201ENSMUST00000035237 Fam213aQ9CYH2 218 aa17.16■□□□□ 0.34
Usp4-201ENSMUST00000035237 Npc1l1Q6T3U4 1333 aa17.15■□□□□ 0.34
Usp4-201ENSMUST00000035237 Cdc27A2A6Q5 825 aa17.15■□□□□ 0.34
Usp4-201ENSMUST00000035237 Asic4Q7TNS7 539 aa17.15■□□□□ 0.34
Usp4-201ENSMUST00000035237 Pcdhb22Q91XZ8 794 aa17.15■□□□□ 0.34
Usp4-201ENSMUST00000035237 Kiaa0232Q80U59 1396 aaKnown RBP17.15■□□□□ 0.34
Usp4-201ENSMUST00000035237 Rfc1P35601 1131 aa17.15■□□□□ 0.34
Usp4-201ENSMUST00000035237 Asap2Q7SIG6 958 aa17.15■□□□□ 0.34
Usp4-201ENSMUST00000035237 Pip4k2bQ80XI4 416 aa17.15■□□□□ 0.34
Usp4-201ENSMUST00000035237 Tcp11l2Q8K1H7 517 aa17.15■□□□□ 0.34
Usp4-201ENSMUST00000035237 Nwd1A6H603 1563 aa17.15■□□□□ 0.34
Usp4-201ENSMUST00000035237 Tmem59lQ7TNI2 337 aa17.15■□□□□ 0.34
Usp4-201ENSMUST00000035237 WtapQ9ER69 396 aa17.15■□□□□ 0.34
Usp4-201ENSMUST00000035237 LbrQ3U9G9 626 aaKnown RBP17.14■□□□□ 0.33
Usp4-201ENSMUST00000035237 Cnga2Q62398 664 aa17.14■□□□□ 0.33
Usp4-201ENSMUST00000035237 Fam160b2Q80YR2 744 aa17.14■□□□□ 0.33
Usp4-201ENSMUST00000035237 Pcdha7Q91Y13 937 aa17.14■□□□□ 0.33
Usp4-201ENSMUST00000035237 Sos2Q02384 1333 aa17.14■□□□□ 0.33
Usp4-201ENSMUST00000035237 Myo1aO88329 1043 aa17.14■□□□□ 0.33
Usp4-201ENSMUST00000035237 Pdia6Q922R8 440 aaKnown RBP17.14■□□□□ 0.33
Usp4-201ENSMUST00000035237 Ccdc96Q9CR92 584 aa17.14■□□□□ 0.33
Usp4-201ENSMUST00000035237 Klhl40Q9D783 621 aa17.14■□□□□ 0.33
Usp4-201ENSMUST00000035237 Prl3d2F6R3P9 224 aa17.13■□□□□ 0.33
Usp4-201ENSMUST00000035237 Grin1P35438 938 aa17.13■□□□□ 0.33
Usp4-201ENSMUST00000035237 AcrbpQ3V140 540 aa17.13■□□□□ 0.33
Usp4-201ENSMUST00000035237 Ctnna3Q65CL1 895 aa17.13■□□□□ 0.33
Usp4-201ENSMUST00000035237 Gm10134F6ZQC6 126 aa17.13■□□□□ 0.33
Usp4-201ENSMUST00000035237 Ccng2O08918 344 aa17.13■□□□□ 0.33
Usp4-201ENSMUST00000035237 Txndc16Q7TN22 820 aa17.13■□□□□ 0.33
Usp4-201ENSMUST00000035237 Vps37dQ810I0 261 aa17.13■□□□□ 0.33
Usp4-201ENSMUST00000035237 Rsph10bE9PYQ0 876 aa17.12■□□□□ 0.33
Usp4-201ENSMUST00000035237 Cct6aP80317 531 aaKnown RBP17.12■□□□□ 0.33
Usp4-201ENSMUST00000035237 Pram1Q6BCL1 675 aa17.12■□□□□ 0.33
Usp4-201ENSMUST00000035237 Ppm1eQ80TL0 749 aa17.12■□□□□ 0.33
Usp4-201ENSMUST00000035237 Krt222Q8CCX5 294 aa17.12■□□□□ 0.33
Usp4-201ENSMUST00000035237 Ccdc114Q3UX62 658 aa17.12■□□□□ 0.33
Usp4-201ENSMUST00000035237 Gpt2Q8BGT5 522 aa17.12■□□□□ 0.33
Usp4-201ENSMUST00000035237 Emilin1Q99K41 1017 aa17.12■□□□□ 0.33
Usp4-201ENSMUST00000035237 Tbc1d8bA3KGB4 1114 aa17.12■□□□□ 0.33
Usp4-201ENSMUST00000035237 Sox5P35710 763 aa17.12■□□□□ 0.33
Usp4-201ENSMUST00000035237 Brms1Q99N20 246 aa17.12■□□□□ 0.33
Usp4-201ENSMUST00000035237 Dnajc21E9Q8D0 531 aa17.11■□□□□ 0.33
Usp4-201ENSMUST00000035237 CrklP47941 303 aa17.11■□□□□ 0.33
Usp4-201ENSMUST00000035237 Csrnp2Q8BGQ2 534 aa17.11■□□□□ 0.33
Usp4-201ENSMUST00000035237 Ttc12Q8BW49 704 aa17.11■□□□□ 0.33
Usp4-201ENSMUST00000035237 PpanQ91YU8 470 aaKnown RBP17.11■□□□□ 0.33
Usp4-201ENSMUST00000035237 Suclg2Q9Z2I8 433 aa17.11■□□□□ 0.33
Usp4-201ENSMUST00000035237 Vsnl1P62761 191 aa17.11■□□□□ 0.33
Usp4-201ENSMUST00000035237 Tc2nQ91XT6 489 aa17.11■□□□□ 0.33
Usp4-201ENSMUST00000035237 Pik3c2bE9QAN8 1632 aa17.11■□□□□ 0.33
Usp4-201ENSMUST00000035237 Epha2Q03145 977 aa17.11■□□□□ 0.33
Usp4-201ENSMUST00000035237 Atg9aQ68FE2 551 aa17.11■□□□□ 0.33
Usp4-201ENSMUST00000035237 Usp49Q6P9L4 685 aa17.11■□□□□ 0.33
Usp4-201ENSMUST00000035237 Fam177a1Q8BR63 207 aa17.11■□□□□ 0.33
Usp4-201ENSMUST00000035237 Uchl5Q9WUP7 329 aa17.11■□□□□ 0.33
Usp4-201ENSMUST00000035237 Ppp1r7Q3UM45 361 aa17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Nlrp9aQ66X03 949 aa17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Prkag3Q8BGM7 489 aa17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Enox1Q8BHR2 643 aaKnown RBP17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Dact1Q8R4A3 778 aa17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Filip1Q9CS72 1211 aa17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Uso1Q9Z1Z0 959 aaKnown RBP17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Cyp26c1B2RXA7 518 aa17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Nap1l1P28656 391 aaKnown RBP17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Llgl2Q3TJ91 1027 aa17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Eif3j1Q3UGC7 261 aaKnown RBP17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Eif3j2Q66JS6 263 aa17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Sorbs3Q9R1Z8 733 aa17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Atp10bB1AWN4 1474 aa17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Slc4a1P04919 929 aa17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Nek1P51954 1203 aa17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Nab2Q61127 525 aa17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Sdad1Q80UZ2 687 aaKnown RBP17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Apol10aQ8CCA5 318 aa17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Nod2Q8K3Z0 1020 aa17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Card14Q99KF0 999 aa17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Ercc4Q9QZD4 917 aa17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Kif13aQ9EQW7 1749 aa17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Myo3bQ1EG27 1305 aa17.1■□□□□ 0.33
Usp4-201ENSMUST00000035237 Myl3P09542 204 aa17.09■□□□□ 0.33
Usp4-201ENSMUST00000035237 Gnl3lQ6PGG6 577 aaKnown RBP17.09■□□□□ 0.33
Usp4-201ENSMUST00000035237 Adcy3Q8VHH7 1145 aa17.09■□□□□ 0.33
Usp4-201ENSMUST00000035237 Riok1Q922Q2 567 aa17.09■□□□□ 0.33
Usp4-201ENSMUST00000035237 Kifc2O08672 792 aa17.09■□□□□ 0.33
Usp4-201ENSMUST00000035237 PparaP23204 468 aa17.09■□□□□ 0.33
Usp4-201ENSMUST00000035237 Adssl1P28650 457 aa17.09■□□□□ 0.33
Usp4-201ENSMUST00000035237 Fam107bQ3TGF2 131 aa17.09■□□□□ 0.33
Usp4-201ENSMUST00000035237 Prl2c1Q5SVL9 228 aa17.09■□□□□ 0.33
Usp4-201ENSMUST00000035237 Igbp1Q61249 340 aa17.09■□□□□ 0.33
Usp4-201ENSMUST00000035237 Slc13a4Q8BZ82 625 aa17.09■□□□□ 0.33
Usp4-201ENSMUST00000035237 Vps37cQ8R105 352 aa17.09■□□□□ 0.33
Usp4-201ENSMUST00000035237 Epb41l2O70318 988 aaKnown RBP17.09■□□□□ 0.33
Usp4-201ENSMUST00000035237 Pde6aP27664 859 aa17.09■□□□□ 0.33
Usp4-201ENSMUST00000035237 Ftl2P49945 183 aa17.09■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 76.2 ms