RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Vps16Q920Q4 839 aa9.68□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Stag1Q9D3E6 1258 aa9.68□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Thsd7aQ69ZU6 1645 aa9.68□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Vps37dQ810I0 261 aa9.68□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Taok3Q8BYC6 898 aa9.68□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Adarb2Q9JI20 745 aa9.68□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Grpel1Q99LP6 217 aa9.68□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Ccdc43Q9CR29 222 aaKnown RBP9.68□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 PparaP23204 468 aa9.68□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Ift88Q61371 824 aa9.68□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Lzts2Q91YU6 671 aa9.68□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Snw1Q9CSN1 536 aaKnown RBP9.68□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Irx4Q9QY61 515 aa9.68□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Tmco3Q8BH01 678 aa9.67□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Xrcc4Q924T3 326 aa9.67□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Nap1l5Q9JJF0 156 aa9.67□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Clic4Q9QYB1 253 aa9.67□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 IncenpQ9WU62 880 aa9.67□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Prdm11A2AGX3 565 aa9.67□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Lins1Q3U1D0 764 aa9.67□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Sass6Q80UK7 654 aa9.67□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Ranbp6Q8BIV3 1105 aa9.67□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Ints4Q8CIM8 964 aa9.67□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Krt40Q6IFX3 439 aa9.67□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 March6Q6ZQ89 909 aa9.67□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Klhl30Q8C3F7 581 aa9.67□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Oxsr1Q6P9R2 527 aa9.67□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Pde5aQ8CG03 865 aa9.67□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Cyp2ab1S4R196 498 aa9.67□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Vmn2r23E9PXI5 849 aa9.67□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Ano6Q6P9J9 911 aa9.67□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 SltmQ8CH25 1031 aaKnown RBP9.67□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Clip2Q9Z0H8 1047 aa9.67□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 NppbP40753 121 aa9.66□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Usp5P56399 858 aaKnown RBP9.66□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Ccdc102aQ3TMW1 549 aa9.66□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Ccdc34Q3UI66 367 aa9.66□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Necab1Q8BG18 352 aa9.66□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Lamb3Q61087 1168 aa9.66□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Eaf2Q91ZD6 262 aa9.66□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Galntl5Q9D4M9 431 aa9.66□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 PsdQ5DTT2 1024 aa9.66□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Txndc16Q7TN22 820 aa9.66□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Sp8Q8BMJ8 486 aa9.66□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Ccdc122Q8BVN0 290 aa9.66□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Atp12aQ9Z1W8 1035 aa9.66□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Cyp2c23E9Q5K4 494 aa9.66□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Slc27a1Q60714 646 aa9.66□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 QarsQ8BML9 775 aa9.66□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Cnpy3Q9DAU1 276 aa9.66□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 LdhaP06151 332 aaKnown RBP9.65□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Abcd1P48410 736 aa9.65□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Cnga2Q62398 664 aa9.65□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 SowahdQ8BY98 327 aa9.65□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 IcoslgQ9JHJ8 322 aa9.65□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Mrc1Q61830 1456 aa9.65□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Bsdc1Q80Y55 427 aa9.65□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Gna11P21278 359 aa9.65□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 MycbpapQ5SUV2 932 aa9.65□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Myl6bQ8CI43 207 aa9.65□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 McamQ8R2Y2 648 aaKnown RBP9.65□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Ttc5Q99LG4 440 aa9.65□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Atp2b1G5E829 1220 aa9.65□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Znf18Q810A1 556 aa9.65□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Cep128Q8BI22 1102 aa9.65□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Mei1Q9D4I2 1268 aa9.65□□□□□ -0.86
Sf3b1-201ENSMUST00000027127 Myo5bP21271 1818 aa9.65□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Cep112Q5PR68 954 aa9.65□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Glg1Q61543 1175 aaKnown RBP9.65□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Kcnj14Q8JZN3 434 aa9.65□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Ccdc96Q9CR92 584 aa9.65□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Mx2Q9WVP9 655 aa9.65□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Oas2E9Q9A9 742 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Rgs9O54828 675 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Spag5Q7TME2 1165 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Dnaaf2Q8BPI1 814 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Chrna2Q91X60 512 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Rbm6S4R1W5 1118 aaKnown RBP9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Tbc1d2B1AVH7 922 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Lnx1O70263 728 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Paxbp1P58501 919 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Znf667Q2TL60 609 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Trappc10Q3TLI0 1259 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Ckap2Q3V1H1 664 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Acap3Q6NXL5 833 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Fchsd1Q6PFY1 688 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Kcnk13Q8R1P5 405 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Ubac1Q8VDI7 409 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Ppfibp2O35711 882 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 DSCC1Q14AI0 399 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Drc7Q6V3W6 876 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Galnt17Q7TT15 598 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Sf3b3Q921M3 1217 aaKnown RBP9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Smtnl1Q99LM3 459 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Pkd2l2Q9JLG4 621 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Cdcp1Q5U462 833 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 RragbQ6NTA4 374 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Lrrd1Q8C0R9 853 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Gimap7Q8R379 293 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Dctpp1Q9QY93 170 aa9.64□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms