RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Lama4P97927 1816 aa17.3■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Dnajc25A2ALW5 357 aa17.3■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 1700029H14RikE9PY36 240 aa17.3■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Ampd3O08739 766 aa17.3■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Pde11aP0C1Q2 933 aa17.3■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Terb1Q8C0V1 768 aa17.3■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Q3TYL0 343 aa17.3■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Ttc14Q9CSP9 761 aa17.3■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Otop3Q80UF9 577 aa17.3■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Ccdc39Q9D5Y1 937 aa17.3■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Stk39Q9Z1W9 556 aa17.3■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Gm10134F6ZQC6 126 aa17.29■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Casp1P29452 402 aa17.29■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Siah1aP61092 282 aa17.29■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Cdc37Q61081 379 aa17.29■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Ctdspl2Q8BG15 465 aa17.29■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Gimap5Q8BWF2 308 aa17.29■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Pik3ap1Q9EQ32 811 aa17.29■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Brwd3A2AHJ4 1799 aa17.29■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Cdc27A2A6Q5 825 aa17.29■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Myo1bP46735 1107 aa17.29■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Cyp7b1Q60991 507 aa17.29■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Pde4bB1AWC9 736 aa17.28■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Kcnd1Q03719 651 aa17.28■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 L1td1Q587J6 782 aaKnown RBP17.28■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Mei4Q8BRM6 389 aa17.28■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Ddx27Q921N6 760 aaKnown RBP17.28■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Elf2Q9JHC9 593 aa17.28■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 CoblQ5NBX1 1337 aaKnown RBP17.28■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Tbc1d8bA3KGB4 1114 aa17.28■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Epb41l2O70318 988 aaKnown RBP17.28■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Abl1P00520 1123 aa17.28■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Taf3Q5HZG4 932 aa17.28■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Rnf41Q8BH75 317 aa17.28■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Tfcp2Q9ERA0 502 aa17.28■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Myh3P13541 1940 aa17.28■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Ddb1Q3U1J4 1140 aaKnown RBP17.28■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Zc3h12cQ5DTV4 884 aa17.28■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Sept9Q80UG5 583 aa17.28■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Tubgcp2Q921G8 905 aa17.28■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Rbm33Q9CXK9 1231 aaKnown RBP17.28■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 CpvlQ9D3S9 478 aa17.28■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 IbspQ61711 324 aa17.27■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Ift122Q6NWV3 1182 aa17.27■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Luc7l2Q7TNC4 392 aaKnown RBP17.27■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Tspyl4Q8VD63 406 aa17.27■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Klc3Q91W40 508 aa17.27■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Cep89Q9CZX2 791 aa17.27■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Polr2dQ9D7M8 142 aaKnown RBP17.27■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Znfx1Q8R151 1909 aaKnown RBP17.27■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Mast2Q60592 1734 aa17.27■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Marf1Q8BJ34 1730 aaKnown RBP17.27■□□□□ 0.36
Nkx3-1-201ENSMUST00000022646 Jakmip2D3YXK0 820 aa17.27■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Frat2Q8K025 231 aa17.27■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Nek3Q9R0A5 511 aa17.27■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Gm5624F6ZZG8 207 aa17.26■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Prl7d1P04769 244 aa17.26■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Samsn1P57725 372 aa17.26■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Slc7a3P70423 618 aa17.26■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Slc27a1Q60714 646 aa17.26■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Fbxo2Q80UW2 297 aa17.26■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Tbc1d5Q80XQ2 815 aa17.26■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 HdlbpQ8VDJ3 1268 aaKnown RBP17.26■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Hic2Q9JLZ6 619 aaKnown RBP17.26■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Zscan20B2KFW1 1030 aa17.26■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Stat5bP42232 786 aa17.26■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Abcf1Q6P542 837 aaKnown RBP17.26■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Q8K2W9 541 aa17.26■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Ktn1Q61595 1327 aaKnown RBP17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Ube4aE9Q735 1028 aa17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Lmod3E9QA62 571 aa17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 GmnnO88513 206 aa17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Tpm1P58771 284 aa17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Slc7a1Q09143 622 aa17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Spata5Q3UMC0 893 aaKnown RBP17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Olfr118Q7TRJ6 321 aa17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Clec16aQ80U30 1036 aa17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Vps16Q920Q4 839 aa17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 ParvgQ9ERD8 331 aa17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Izumo3A6PWV3 263 aa17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Bnip3O55003 187 aa17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 IntuQ059U7 942 aa17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Fam89aQ14BJ1 175 aa17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Gtf2f1Q3THK3 508 aaKnown RBP17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Pex1Q5BL07 1284 aa17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 HelbQ6NVF4 1074 aa17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Usp49Q6P9L4 685 aa17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Creld2Q9CYA0 350 aa17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Myh6Q02566 1938 aaKnown RBP17.25■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Bicdl1A0JNT9 577 aa17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Dynll1P63168 89 aa17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Znf526Q8BI66 675 aa17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 SowahdQ8BY98 327 aa17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Krt23Q99PS0 422 aa17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 CenpqQ9CPQ5 267 aa17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Ybx3Q9JKB3 361 aaKnown RBP17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Scn11aQ9R053 1765 aa17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Sec23aQ01405 765 aa17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Snai1Q02085 264 aa17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 PsdQ5DTT2 1024 aa17.24■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms