RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Pcdha7Q91Y13 937 aa21.15■□□□□ 0.98
Ubp1-201ENSMUST00000009885 Zscan20B2KFW1 1030 aa21.15■□□□□ 0.98
Ubp1-201ENSMUST00000009885 Epha2Q03145 977 aa21.15■□□□□ 0.98
Ubp1-201ENSMUST00000009885 C87499Q3UX49 493 aa21.15■□□□□ 0.98
Ubp1-201ENSMUST00000009885 Tmem59lQ7TNI2 337 aa21.15■□□□□ 0.98
Ubp1-201ENSMUST00000009885 Cyp4f39Q8BGU0 532 aa21.15■□□□□ 0.98
Ubp1-201ENSMUST00000009885 Bola3Q8CEI1 110 aa21.15■□□□□ 0.98
Ubp1-201ENSMUST00000009885 Card14Q99KF0 999 aa21.15■□□□□ 0.98
Ubp1-201ENSMUST00000009885 Speer4bQ9D9F7 267 aa21.15■□□□□ 0.98
Ubp1-201ENSMUST00000009885 Cct6aP80317 531 aaKnown RBP21.15■□□□□ 0.98
Ubp1-201ENSMUST00000009885 Ripor2Q80U16 1078 aa21.15■□□□□ 0.98
Ubp1-201ENSMUST00000009885 Usp27Q8CEG8 438 aa21.15■□□□□ 0.98
Ubp1-201ENSMUST00000009885 Pde5aQ8CG03 865 aa21.15■□□□□ 0.98
Ubp1-201ENSMUST00000009885 Flad1Q8R123 492 aa21.15■□□□□ 0.98
Ubp1-201ENSMUST00000009885 Tfcp2Q9ERA0 502 aa21.15■□□□□ 0.98
Ubp1-201ENSMUST00000009885 Irx5Q9JKQ4 484 aa21.15■□□□□ 0.98
Ubp1-201ENSMUST00000009885 Rsrc2A2RTL5 376 aaKnown RBP21.14■□□□□ 0.98
Ubp1-201ENSMUST00000009885 Iqcb1Q8BP00 598 aa21.14■□□□□ 0.98
Ubp1-201ENSMUST00000009885 Filip1Q9CS72 1211 aa21.14■□□□□ 0.98
Ubp1-201ENSMUST00000009885 Ercc4Q9QZD4 917 aa21.14■□□□□ 0.98
Ubp1-201ENSMUST00000009885 Fam107bQ3TGF2 131 aa21.14■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Sdad1Q80UZ2 687 aaKnown RBP21.14■□□□□ 0.97
Ubp1-201ENSMUST00000009885 RereQ80TZ9 1558 aa21.14■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Ap1g2O88512 791 aa21.14■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Pald1P70261 859 aa21.14■□□□□ 0.97
Ubp1-201ENSMUST00000009885 GptQ8QZR5 496 aa21.14■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Tut1Q8R3F9 869 aa21.14■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Ccng2O08918 344 aa21.13■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Sox5P35710 763 aa21.13■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Adcy3Q8VHH7 1145 aa21.13■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Gm21698A0A087WQP8 267 aa21.13■□□□□ 0.97
Ubp1-201ENSMUST00000009885 TbcaP48428 108 aaKnown RBP21.13■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Kiaa0232Q80U59 1396 aaKnown RBP21.13■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Ric8aQ3TIR3 530 aa21.13■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Acbd5Q5XG73 508 aa21.13■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Tacc1Q6Y685 774 aa21.13■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Nab2Q61127 525 aa21.12■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Usp49Q6P9L4 685 aa21.12■□□□□ 0.97
Ubp1-201ENSMUST00000009885 ThemisQ8BGW0 636 aa21.12■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Hap1O35668 628 aa21.12■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Adam1aQ60813 791 aa21.12■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Srgap2Q91Z67 1071 aa21.12■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Appbp2Q9DAX9 585 aa21.12■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Rsph10bE9PYQ0 876 aa21.12■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Stim1P70302 685 aa21.12■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Lrrc1Q80VQ1 524 aa21.12■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Wasf1Q8R5H6 559 aa21.12■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Kif1aP33173 1695 aa21.11■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Myo3bQ1EG27 1305 aa21.11■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Prl2c1Q5SVL9 228 aa21.11■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Ccp110Q7TSH4 1004 aa21.11■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Nek1P51954 1203 aa21.11■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Kifap3P70188 793 aa21.11■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Mrps31Q61733 384 aaKnown RBP21.11■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Gm11983V9GXS8 105 aa21.11■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Skap2Q3UND0 358 aa21.11■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Cnga2Q62398 664 aa21.11■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Vps37dQ810I0 261 aa21.11■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Enox1Q8BHR2 643 aaKnown RBP21.11■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Syde2E9PUP1 1314 aa21.1■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Nap1l1P28656 391 aaKnown RBP21.1■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Rrp1bQ91YK2 724 aaKnown RBP21.1■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Efcab2Q9CQ46 164 aa21.1■□□□□ 0.97
Ubp1-201ENSMUST00000009885 MypnQ5DTJ9 1315 aa21.1■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Adssl1P28650 457 aa21.1■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Cdr2P97817 455 aa21.1■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Llgl2Q3TJ91 1027 aa21.1■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Nek3Q9R0A5 511 aa21.1■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Gucy2cQ3UWA6 1072 aa21.09■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Ccdc148Q6P5U8 527 aa21.09■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Csrnp2Q8BGQ2 534 aa21.09■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Apol10aQ8CCA5 318 aa21.09■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Rtn1Q8K0T0 780 aa21.09■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Trim29Q8R2Q0 587 aa21.09■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Lmbr1Q9JIT0 490 aa21.09■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Uso1Q9Z1Z0 959 aaKnown RBP21.09■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Krt86P97861 486 aa21.09■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Fhod1Q6P9Q4 1197 aa21.09■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Pla2g4fQ50L41 855 aa21.08■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Asnsd1Q8BFS9 627 aa21.08■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Pcdhb22Q91XZ8 794 aa21.08■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Fam217aQ9D9W6 419 aa21.08■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Sorbs3Q9R1Z8 733 aa21.08■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Rbm19Q8R3C6 952 aaKnown RBP21.08■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Npc1l1Q6T3U4 1333 aa21.08■□□□□ 0.97
Ubp1-201ENSMUST00000009885 Traf1P39428 409 aa21.08■□□□□ 0.96
Ubp1-201ENSMUST00000009885 Ppp1r37Q8BKR5 712 aa21.08■□□□□ 0.96
Ubp1-201ENSMUST00000009885 Dzip1Q8BMD2 852 aa21.08■□□□□ 0.96
Ubp1-201ENSMUST00000009885 Gps2Q921N8 327 aa21.08■□□□□ 0.96
Ubp1-201ENSMUST00000009885 Mkrn1Q9QXP6 481 aa21.08■□□□□ 0.96
Ubp1-201ENSMUST00000009885 Asap2Q7SIG6 958 aa21.07■□□□□ 0.96
Ubp1-201ENSMUST00000009885 Txndc16Q7TN22 820 aa21.07■□□□□ 0.96
Ubp1-201ENSMUST00000009885 Ribc1Q9D0B8 379 aa21.07■□□□□ 0.96
Ubp1-201ENSMUST00000009885 Tulp1Q9Z273 543 aa21.07■□□□□ 0.96
Ubp1-201ENSMUST00000009885 Il7P10168 154 aa21.07■□□□□ 0.96
Ubp1-201ENSMUST00000009885 Pdia6Q922R8 440 aaKnown RBP21.07■□□□□ 0.96
Ubp1-201ENSMUST00000009885 Nol7Q9D7Z3 254 aaKnown RBP21.07■□□□□ 0.96
Ubp1-201ENSMUST00000009885 Phkg2Q9DB30 406 aa21.07■□□□□ 0.96
Ubp1-201ENSMUST00000009885 Suclg2Q9Z2I8 433 aa21.07■□□□□ 0.96
Ubp1-201ENSMUST00000009885 Ccdc24E9PUW8 296 aa21.07■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms