RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 PpardP35396 440 aa14.43□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Panx2Q6IMP4 677 aa14.43□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Slf2Q6P9P0 1278 aa14.43□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Cc2d1bQ8BRN9 848 aa14.43□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Appbp2Q9DAX9 585 aa14.43□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Klf15Q9EPW2 415 aa14.43□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Samd15F6XZJ7 620 aa14.42□□□□□ -0.1
Clcn3-201ENSMUST00000004430 TsksO54887 585 aa14.42□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Ppp1r21Q3TDD9 780 aa14.42□□□□□ -0.1
Clcn3-201ENSMUST00000004430 MmeQ61391 750 aa14.42□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Exoc1Q8R3S6 894 aa14.42□□□□□ -0.1
Clcn3-201ENSMUST00000004430 NapgQ9CWZ7 312 aa14.42□□□□□ -0.1
Clcn3-201ENSMUST00000004430 UvssaQ9D479 717 aa14.42□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Asic3Q6X1Y6 530 aa14.42□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Ubn2Q80WC1 1314 aa14.42□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Palm3A2TJV2 734 aa14.42□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Gm20425E9Q035 978 aaKnown RBP14.42□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Casp1P29452 402 aa14.42□□□□□ -0.1
Clcn3-201ENSMUST00000004430 SrprbP47758 269 aa14.42□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Ssrp1Q08943 708 aaKnown RBP14.42□□□□□ -0.1
Clcn3-201ENSMUST00000004430 C3P01027 1663 aa14.42□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Ptpn23Q6PB44 1692 aa14.42□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Als2Q920R0 1651 aa14.42□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Gm43638A0A0J9YU36 694 aa14.41□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Pde4bB1AWC9 736 aa14.41□□□□□ -0.1
Clcn3-201ENSMUST00000004430 C87499Q3UX49 493 aa14.41□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Ppp1r37Q8BKR5 712 aa14.41□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Mdh1bQ5F204 500 aa14.41□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Pde5aQ8CG03 865 aa14.41□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Pde3aQ9Z0X4 1141 aa14.41□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Col1a2Q01149 1372 aa14.41□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Lcmt1A0A0U1RNF2 332 aa14.41□□□□□ -0.1
Clcn3-201ENSMUST00000004430 MarcksP26645 309 aaKnown RBP14.41□□□□□ -0.1
Clcn3-201ENSMUST00000004430 HellsQ60848 821 aa14.41□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Ccdc122Q8BVN0 290 aa14.41□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Tmem143Q8VD26 458 aa14.41□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Ubac1Q8VDI7 409 aa14.41□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Luc7lQ9CYI4 371 aaKnown RBP14.41□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Phkg2Q9DB30 406 aa14.41□□□□□ -0.1
Clcn3-201ENSMUST00000004430 IkQ9Z1M8 557 aaKnown RBP14.41□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Uso1Q9Z1Z0 959 aaKnown RBP14.41□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Pnpla7A2AJ88 1352 aa14.41□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Aox4Q3TYQ9 1336 aa14.4□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Speer4dL7N216 212 aa14.4□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Dctn1O08788 1281 aa14.4□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Mctp2Q5RJH2 878 aa14.4□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Nlrp9aQ66X03 949 aa14.4□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Zbtb40Q6PCS8 1258 aa14.4□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Tut1Q8R3F9 869 aa14.4□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Plekho1Q9JIY0 408 aa14.4□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Mkrn3Q60764 544 aa14.4□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Asic1Q6NXK8 526 aa14.4□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Atad2Q8CDM1 1040 aa14.4□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Abcc12Q80WJ6 1366 aa14.4□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Syde2E9PUP1 1314 aa14.4□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Lipo1J3QME6 396 aa14.4□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Tax1bp1Q3UKC1 814 aaKnown RBP14.4□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Cd209bQ8CJ91 325 aa14.4□□□□□ -0.1
Clcn3-201ENSMUST00000004430 Fam186bD3Z420 943 aa14.39□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Nfxl1E9Q8I7 918 aaKnown RBP14.39□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Tbc1d2bQ3U0J8 965 aa14.39□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Gngt1Q61012 74 aa14.39□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Acap3Q6NXL5 833 aa14.39□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Rapgef3Q8VCC8 918 aa14.39□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Prc1Q99K43 603 aaKnown RBP14.39□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Ugt1a6bK9J7B2 531 aa14.39□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Ugt1a6Q64435 531 aa14.39□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Ugt1a7cQ6ZQM8 531 aa14.39□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Tex19.1Q99MV2 351 aa14.39□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Stx17Q9D0I4 301 aa14.39□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Mei1Q9D4I2 1268 aa14.39□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Q9D5Q8 446 aa14.39□□□□□ -0.11
Clcn3-201ENSMUST00000004430 CrklP47941 303 aa14.39□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Pcdhb22Q91XZ8 794 aa14.39□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Tlcd1Q99JT6 247 aa14.39□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Ppp2r3dQ9Z176 491 aa14.39□□□□□ -0.11
Clcn3-201ENSMUST00000004430 A0A1W2P6Q8 802 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Gm9048A0A1W2P7H4 802 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 A0A1W2P7S8 802 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 A0A1W2P7Z8 802 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Gm9046A0A1W2P855 802 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Slc7a3P70423 618 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Nkx2-3P97334 362 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Cdc5lQ6A068 802 aaKnown RBP14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Dhx40Q6PE54 779 aaKnown RBP14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Ufl1Q8CCJ3 793 aaKnown RBP14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 CerkQ8K4Q7 531 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Adcy3Q8VHH7 1145 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 PparaP23204 468 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Traf3ip1Q149C2 625 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Ccdc42Q5SV66 316 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Asic4Q7TNS7 539 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Sdad1Q80UZ2 687 aaKnown RBP14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Bola3Q8CEI1 110 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 PpanQ91YU8 470 aaKnown RBP14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Large1Q9Z1M7 756 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Mast3Q3U214 1321 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Fbf1A2A870 1173 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 NpcdF8VQB8 469 aa14.38□□□□□ -0.11
Clcn3-201ENSMUST00000004430 Wdr70Q3TWF6 657 aa14.38□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms