RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 PTC4P38089 393 aa10.43□□□□□ -0.74
snR56snR56 YEL023CP39992 682 aa10.42□□□□□ -0.74
snR56snR56 CHL1P22516 861 aaPredicted RBP10.37□□□□□ -0.75
snR56snR56 PRE3P38624 215 aa10.34□□□□□ -0.75
snR56snR56 BCK2P33306 851 aa10.33□□□□□ -0.76
snR56snR56 GRE2Q12068 342 aaKnown RBP10.32□□□□□ -0.76
snR56snR56 MAK11P20484 414 aaKnown RBP10.28□□□□□ -0.76
snR56snR56 RAM2P29703 316 aa10.27□□□□□ -0.77
snR56snR56 MIF2P35201 549 aa10.25□□□□□ -0.77
snR56snR56 EDS1P38073 919 aa10.25□□□□□ -0.77
snR56snR56 PTC3P34221 468 aaKnown RBP10.23□□□□□ -0.77
snR56snR56 PML39Q03760 334 aa10.22□□□□□ -0.77
snR56snR56 GUT1P32190 709 aa10.21□□□□□ -0.77
snR56snR56 YDR344CQ05510 147 aa10.21□□□□□ -0.77
snR56snR56 ATH1P48016 1211 aa10.2□□□□□ -0.78
snR56snR56 NST1P53935 1240 aa10.18□□□□□ -0.78
snR56snR56 COQ8P27697 501 aa10.13□□□□□ -0.79
snR56snR56 VRP1P37370 817 aa10.11□□□□□ -0.79
snR56snR56 SOL3P38858 249 aa10.11□□□□□ -0.79
snR56snR56 ELP4Q02884 456 aaKnown RBP10.11□□□□□ -0.79
snR56snR56 XDJ1P39102 459 aa10.09□□□□□ -0.79
snR56snR56 MID1P41821 548 aa10.09□□□□□ -0.79
snR56snR56 ARH1P48360 493 aa10.08□□□□□ -0.8
snR56snR56 MPH3P0CE00 602 aa10.04□□□□□ -0.8
snR56snR56 AI4P03878 556 aa10.03□□□□□ -0.8
snR56snR56 ILV3P39522 585 aaKnown RBP10□□□□□ -0.81
snR56snR56 NOP53Q12080 455 aaKnown RBP9.98□□□□□ -0.81
snR56snR56 SPT23P35210 1082 aa9.95□□□□□ -0.82
snR56snR56 PEX29Q03370 554 aa9.95□□□□□ -0.82
snR56snR56 YGR273CP53329 174 aa9.93□□□□□ -0.82
snR56snR56 HAP5Q02516 242 aa9.9□□□□□ -0.82
snR56snR56 DPS1P04802 557 aaKnown RBP9.87□□□□□ -0.83
snR56snR56 BNI4P53858 892 aa9.86□□□□□ -0.83
snR56snR56 MPC54Q08550 464 aa9.86□□□□□ -0.83
snR56snR56 YML082WQ04533 649 aaKnown RBP9.83□□□□□ -0.84
snR56snR56 SLI15P38283 698 aa9.8□□□□□ -0.84
snR56snR56 PTC2P39966 464 aaKnown RBP9.78□□□□□ -0.84
snR56snR56 NMA111P53920 997 aa9.78□□□□□ -0.84
snR56snR56 DPL1Q05567 589 aa9.75□□□□□ -0.85
snR56snR56 KEX1P09620 729 aa9.7□□□□□ -0.86
snR56snR56 SRC1Q03707 834 aa9.69□□□□□ -0.86
snR56snR56 YPR015CQ12531 247 aa9.65□□□□□ -0.86
snR56snR56 RAM1P22007 431 aa9.63□□□□□ -0.87
snR56snR56 ISU2Q12056 156 aa9.63□□□□□ -0.87
snR56snR56 SET1P38827 1080 aaKnown RBP9.62□□□□□ -0.87
snR56snR56 CDC73Q06697 393 aa9.61□□□□□ -0.87
snR56snR56 UBP14P38237 781 aaKnown RBP9.6□□□□□ -0.87
snR56snR56 YLR326WQ06170 240 aaKnown RBP9.59□□□□□ -0.87
snR56snR56 RAS1P01119 309 aa9.56□□□□□ -0.88
snR56snR56 VHR2P40041 505 aa9.54□□□□□ -0.88
snR56snR56 PCS60P38137 543 aaKnown RBP RIP-Chip data9.53□□□□□ -0.88not detected
snR56snR56 PDR1P12383 1068 aa9.5□□□□□ -0.89
snR56snR56 RAD54P32863 898 aa9.48□□□□□ -0.89
snR56snR56 GYP1Q08484 637 aa9.48□□□□□ -0.89
snR56snR56 AMS1P22855 1083 aa9.44□□□□□ -0.9
snR56snR56 SDH2P21801 266 aa9.42□□□□□ -0.9
snR56snR56 SAS4Q04003 481 aa9.42□□□□□ -0.9
snR56snR56 RPP1BP10622 106 aaKnown RBP9.41□□□□□ -0.9
snR56snR56 YDR090CQ03193 310 aa9.41□□□□□ -0.9
snR56snR56 IFH1P39520 1085 aa9.35□□□□□ -0.91
snR56snR56 TRK1P12685 1235 aa9.34□□□□□ -0.91
snR56snR56 GAP1P19145 602 aaPredicted RBP9.33□□□□□ -0.92
snR56snR56 RGA1P39083 1007 aa9.33□□□□□ -0.92
snR56snR56 RGA2Q06407 1009 aa9.32□□□□□ -0.92
snR56snR56 BUD20Q08004 166 aaPredicted RBP9.32□□□□□ -0.92
snR56snR56 YRR1Q12172 810 aa9.31□□□□□ -0.92
snR56snR56 KIC1P38692 1080 aa9.3□□□□□ -0.92
snR56snR56 YPR148CQ06523 435 aa9.28□□□□□ -0.92
snR56snR56 YEL077CQ3E7X8 1277 aa9.28□□□□□ -0.92
snR56snR56 PRT1P06103 763 aaKnown RBP9.27□□□□□ -0.93
snR56snR56 STR2P47164 639 aa9.27□□□□□ -0.93
snR56snR56 PEX21P50091 288 aa9.27□□□□□ -0.93
snR56snR56 CSC1Q06538 782 aa9.27□□□□□ -0.93
snR56snR56 MRF1P30775 413 aaPredicted RBP9.26□□□□□ -0.93
snR56snR56 REF2P42073 533 aaPredicted RBP9.26□□□□□ -0.93
snR56snR56 TFB4Q12004 338 aa9.26□□□□□ -0.93
snR56snR56 ISM1P48526 1002 aa9.24□□□□□ -0.93
snR56snR56 TUM1Q08686 304 aaKnown RBP9.22□□□□□ -0.93
snR56snR56 NUD1P32336 851 aa9.21□□□□□ -0.94
snR56snR56 ORC6P38826 435 aa9.21□□□□□ -0.94
snR56snR56 ERG12P07277 443 aa9.14□□□□□ -0.95
snR56snR56 COX6P00427 148 aa9.13□□□□□ -0.95
snR56snR56 TY1A-DR4O74302 440 aa9.12□□□□□ -0.95
snR56snR56 TY1A-HP0C2I4 478 aaKnown RBP9.12□□□□□ -0.95
snR56snR56 TY1A-AP0CX57 440 aa9.12□□□□□ -0.95
snR56snR56 TY1A-PR1P0CX58 440 aa9.12□□□□□ -0.95
snR56snR56 TY1A-ORP0CX59 440 aa9.12□□□□□ -0.95
snR56snR56 TY1A-PR2P0CX60 440 aa9.12□□□□□ -0.95
snR56snR56 TY1A-DR5P0CX65 440 aa9.12□□□□□ -0.95
snR56snR56 TY1A-ER2P0CX66 440 aa9.12□□□□□ -0.95
snR56snR56 TY1A-GR3P0CX67 440 aa9.12□□□□□ -0.95
snR56snR56 TY1A-LR1P0CX68 440 aa9.12□□□□□ -0.95
snR56snR56 TY1A-MR2P0CX69 440 aa9.12□□□□□ -0.95
snR56snR56 NPL4P33755 580 aa9.12□□□□□ -0.95
snR56snR56 TY1A-JR2P47099 440 aa9.12□□□□□ -0.95
snR56snR56 TY1A-DR1Q03856 440 aa9.12□□□□□ -0.95
snR56snR56 TY1A-ML1Q04706 440 aaKnown RBP9.12□□□□□ -0.95
snR56snR56 MAK21Q12176 1025 aaKnown RBP9.12□□□□□ -0.95
snR56snR56 TY1A-BRQ12217 440 aa9.12□□□□□ -0.95
snR56snR56 TY1A-NL2Q12470 440 aa9.12□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms