RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 HTA2P04912 132 aa3.59□□□□□ -1.83
snR50snR50 YMR1P47147 688 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
snR50snR50 PML39Q03760 334 aa3.59□□□□□ -1.83
snR50snR50 STS1P38637 319 aa3.58□□□□□ -1.84
snR50snR50 SPT23P35210 1082 aa3.57□□□□□ -1.84
snR50snR50 GYP5Q12344 894 aa3.57□□□□□ -1.84
snR50snR50 MRM1P25270 412 aa3.56□□□□□ -1.84
snR50snR50 DCW1P36091 449 aa3.56□□□□□ -1.84
snR50snR50 PSD2P53037 1138 aaKnown RBP3.55□□□□□ -1.84
snR50snR50 YML082WQ04533 649 aaKnown RBP3.53□□□□□ -1.84
snR50snR50 MID1P41821 548 aa3.5□□□□□ -1.85
snR50snR50 BNI4P53858 892 aa3.47□□□□□ -1.85
snR50snR50 AMS1P22855 1083 aa3.46□□□□□ -1.86
snR50snR50 HAP5Q02516 242 aa3.44□□□□□ -1.86
snR50snR50 YAH1Q12184 172 aaKnown RBP3.43□□□□□ -1.86
snR50snR50 SDH2P21801 266 aa3.42□□□□□ -1.86
snR50snR50 GAR1P28007 205 aaKnown RBP3.42□□□□□ -1.86
snR50snR50 PTC2P39966 464 aaKnown RBP3.42□□□□□ -1.86
snR50snR50 NST1P53935 1240 aa3.42□□□□□ -1.86
snR50snR50 YLR271WQ06152 274 aa3.41□□□□□ -1.86
snR50snR50 YPR015CQ12531 247 aa3.4□□□□□ -1.87
snR50snR50 PEX29Q03370 554 aa3.39□□□□□ -1.87
snR50snR50 RTG3P38165 486 aa3.37□□□□□ -1.87
snR50snR50 GBP2P25555 427 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
snR50snR50 BRE2P43132 505 aa3.35□□□□□ -1.87
snR50snR50 MTC5Q03897 1148 aa3.35□□□□□ -1.87
snR50snR50 RAM1P22007 431 aa3.33□□□□□ -1.88
snR50snR50 RCR1P38212 213 aa3.3□□□□□ -1.88
snR50snR50 ILV3P39522 585 aaKnown RBP3.3□□□□□ -1.88
snR50snR50 MPC54Q08550 464 aa3.3□□□□□ -1.88
snR50snR50 SOL3P38858 249 aa3.29□□□□□ -1.88
snR50snR50 YDL176WQ12027 708 aa3.29□□□□□ -1.88
snR50snR50 MET22P32179 357 aa3.28□□□□□ -1.88
snR50snR50 GRE2Q12068 342 aaKnown RBP3.28□□□□□ -1.88
snR50snR50 MPH3P0CE00 602 aa3.26□□□□□ -1.89
snR50snR50 NMA111P53920 997 aa3.26□□□□□ -1.89
snR50snR50 AIR1P40507 360 aaKnown RBP3.25□□□□□ -1.89
snR50snR50 ENV9Q08651 330 aa3.25□□□□□ -1.89
snR50snR50 AI4P03878 556 aa3.24□□□□□ -1.89
snR50snR50 GCR2Q01722 534 aa3.24□□□□□ -1.89
snR50snR50 GYP1Q08484 637 aa3.23□□□□□ -1.89
snR50snR50 GUT1P32190 709 aa3.22□□□□□ -1.89
snR50snR50 CLA4P48562 842 aa3.21□□□□□ -1.9
snR50snR50 CST9Q06032 482 aa3.21□□□□□ -1.9
snR50snR50 YEL077CQ3E7X8 1277 aa3.2□□□□□ -1.9
snR50snR50 SAS4Q04003 481 aa3.19□□□□□ -1.9
snR50snR50 ATH1P48016 1211 aa3.17□□□□□ -1.9
snR50snR50 YDR444WQ04093 687 aa3.16□□□□□ -1.9
snR50snR50 PTC3P34221 468 aaKnown RBP3.14□□□□□ -1.91
snR50snR50 DPL1Q05567 589 aa3.14□□□□□ -1.91
snR50snR50 EDS1P38073 919 aa3.13□□□□□ -1.91
snR50snR50 SLI15P38283 698 aa3.11□□□□□ -1.91
snR50snR50 CST6P40535 587 aa3.11□□□□□ -1.91
snR50snR50 LCB5Q06147 687 aaKnown RBP3.11□□□□□ -1.91
snR50snR50 PDR1P12383 1068 aa3.1□□□□□ -1.91
snR50snR50 ISU2Q12056 156 aa3.09□□□□□ -1.91
snR50snR50 MRF1P30775 413 aaPredicted RBP3.08□□□□□ -1.92
snR50snR50 CDC4P07834 779 aa3.07□□□□□ -1.92
snR50snR50 NRD1P53617 575 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
snR50snR50 BFR2Q06631 534 aaKnown RBP3.05□□□□□ -1.92
snR50snR50 LAM6Q08001 693 aa3.05□□□□□ -1.92
snR50snR50 TRK2P28584 889 aa3.04□□□□□ -1.92
snR50snR50 MIF2P35201 549 aa3.03□□□□□ -1.92
snR50snR50 YGR273CP53329 174 aa3.03□□□□□ -1.92
snR50snR50 MGA2P40578 1113 aa3.02□□□□□ -1.93
snR50snR50 BUD20Q08004 166 aaPredicted RBP3.02□□□□□ -1.93
snR50snR50 LSB3P43603 459 aaKnown RBP3.01□□□□□ -1.93
snR50snR50 ACO2P39533 789 aa2.99□□□□□ -1.93
snR50snR50 CDC73Q06697 393 aa2.99□□□□□ -1.93
snR50snR50 ERG12P07277 443 aa2.98□□□□□ -1.93
snR50snR50 RRD1P40454 393 aaKnown RBP2.98□□□□□ -1.93
snR50snR50 PRT1P06103 763 aaKnown RBP2.97□□□□□ -1.93
snR50snR50 ARP8Q12386 881 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
snR50snR50 ICP55P40051 511 aa2.95□□□□□ -1.94
snR50snR50 CAF120P53836 1060 aa2.95□□□□□ -1.94
snR50snR50 MAK11P20484 414 aaKnown RBP2.93□□□□□ -1.94
snR50snR50 SSP1P38871 571 aa2.93□□□□□ -1.94
snR50snR50 STR2P47164 639 aa2.92□□□□□ -1.94
snR50snR50 YGR035CP53222 116 aa2.92□□□□□ -1.94
snR50snR50 HED1Q03937 162 aa2.92□□□□□ -1.94
snR50snR50 ASH1P34233 588 aa2.91□□□□□ -1.94
snR50snR50 FRK1Q03002 865 aaPredicted RBP2.91□□□□□ -1.94
snR50snR50 MET32Q12041 191 aa2.91□□□□□ -1.94
snR50snR50 COQ8P27697 501 aa2.9□□□□□ -1.95
snR50snR50 BDP1P46678 594 aa2.9□□□□□ -1.95
snR50snR50 HPF1Q05164 967 aa2.9□□□□□ -1.95
snR50snR50 AFT1P22149 690 aa2.89□□□□□ -1.95
snR50snR50 ISM1P48526 1002 aa2.89□□□□□ -1.95
snR50snR50 PUS1Q12211 544 aaKnown RBP2.88□□□□□ -1.95
snR50snR50 KEX1P09620 729 aa2.86□□□□□ -1.95
snR50snR50 TY1A-DR4O74302 440 aa2.85□□□□□ -1.95
snR50snR50 TY1A-HP0C2I4 478 aaKnown RBP2.85□□□□□ -1.95
snR50snR50 TY1A-AP0CX57 440 aa2.85□□□□□ -1.95
snR50snR50 TY1A-PR1P0CX58 440 aa2.85□□□□□ -1.95
snR50snR50 TY1A-ORP0CX59 440 aa2.85□□□□□ -1.95
snR50snR50 TY1A-PR2P0CX60 440 aa2.85□□□□□ -1.95
snR50snR50 TY1A-DR5P0CX65 440 aa2.85□□□□□ -1.95
snR50snR50 TY1A-ER2P0CX66 440 aa2.85□□□□□ -1.95
snR50snR50 TY1A-GR3P0CX67 440 aa2.85□□□□□ -1.95
snR50snR50 TY1A-LR1P0CX68 440 aa2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms