RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 CHL1P22516 861 aaPredicted RBP6.23□□□□□ -1.41
snR49snR49 PTC4P38089 393 aa6.23□□□□□ -1.41
snR49snR49 YEL023CP39992 682 aa6.23□□□□□ -1.41
snR49snR49 BCK2P33306 851 aa6.21□□□□□ -1.42
snR49snR49 PRE3P38624 215 aa6.2□□□□□ -1.42
snR49snR49 YDR344CQ05510 147 aa6.14□□□□□ -1.43
snR49snR49 GRE2Q12068 342 aaKnown RBP6.14□□□□□ -1.43
snR49snR49 PML39Q03760 334 aa6.12□□□□□ -1.43
snR49snR49 MIF2P35201 549 aa6.11□□□□□ -1.43
snR49snR49 EDS1P38073 919 aa6.11□□□□□ -1.43
snR49snR49 MAK11P20484 414 aaKnown RBP6.1□□□□□ -1.43
snR49snR49 RAM2P29703 316 aa6.1□□□□□ -1.43
snR49snR49 PTC3P34221 468 aaKnown RBP6.1□□□□□ -1.43
snR49snR49 GUT1P32190 709 aa6.08□□□□□ -1.44
snR49snR49 VRP1P37370 817 aa6.08□□□□□ -1.44
snR49snR49 ATH1P48016 1211 aa6.08□□□□□ -1.44
snR49snR49 NST1P53935 1240 aa6.07□□□□□ -1.44
snR49snR49 ELP4Q02884 456 aaKnown RBP6.07□□□□□ -1.44
snR49snR49 XDJ1P39102 459 aa6.06□□□□□ -1.44
snR49snR49 SOL3P38858 249 aa6.04□□□□□ -1.44
snR49snR49 MID1P41821 548 aa6.04□□□□□ -1.44
snR49snR49 ARH1P48360 493 aa6.03□□□□□ -1.44
snR49snR49 COQ8P27697 501 aa6.02□□□□□ -1.45
snR49snR49 MPH3P0CE00 602 aa5.99□□□□□ -1.45
snR49snR49 AI4P03878 556 aa5.97□□□□□ -1.45
snR49snR49 ILV3P39522 585 aaKnown RBP5.97□□□□□ -1.45
snR49snR49 SPT23P35210 1082 aa5.96□□□□□ -1.46
snR49snR49 PEX29Q03370 554 aa5.95□□□□□ -1.46
snR49snR49 DPS1P04802 557 aaKnown RBP5.94□□□□□ -1.46
snR49snR49 HAP5Q02516 242 aa5.92□□□□□ -1.46
snR49snR49 YGR273CP53329 174 aa5.91□□□□□ -1.46
snR49snR49 NOP53Q12080 455 aaKnown RBP5.9□□□□□ -1.46
snR49snR49 BNI4P53858 892 aa5.89□□□□□ -1.47
snR49snR49 MPC54Q08550 464 aa5.89□□□□□ -1.47
snR49snR49 YML082WQ04533 649 aaKnown RBP5.87□□□□□ -1.47
snR49snR49 PTC2P39966 464 aaKnown RBP5.86□□□□□ -1.47
snR49snR49 SLI15P38283 698 aa5.85□□□□□ -1.47
snR49snR49 NMA111P53920 997 aa5.85□□□□□ -1.47
snR49snR49 SRC1Q03707 834 aa5.82□□□□□ -1.48
snR49snR49 DPL1Q05567 589 aa5.81□□□□□ -1.48
snR49snR49 YPR015CQ12531 247 aa5.78□□□□□ -1.48
snR49snR49 KEX1P09620 729 aa5.77□□□□□ -1.49
snR49snR49 RAM1P22007 431 aa5.75□□□□□ -1.49
snR49snR49 ISU2Q12056 156 aa5.75□□□□□ -1.49
snR49snR49 RAS1P01119 309 aa5.74□□□□□ -1.49
snR49snR49 CDC73Q06697 393 aa5.73□□□□□ -1.49
snR49snR49 UBP14P38237 781 aaKnown RBP5.71□□□□□ -1.5
snR49snR49 YLR326WQ06170 240 aaKnown RBP5.71□□□□□ -1.5
snR49snR49 SET1P38827 1080 aaKnown RBP5.7□□□□□ -1.5
snR49snR49 PDR1P12383 1068 aa5.68□□□□□ -1.5
snR49snR49 PCS60P38137 543 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
snR49snR49 VHR2P40041 505 aa5.67□□□□□ -1.5
snR49snR49 GYP1Q08484 637 aa5.67□□□□□ -1.5
snR49snR49 SDH2P21801 266 aa5.65□□□□□ -1.5
snR49snR49 AMS1P22855 1083 aa5.65□□□□□ -1.5
snR49snR49 RGA2Q06407 1009 aa5.65□□□□□ -1.5
snR49snR49 RAD54P32863 898 aa5.63□□□□□ -1.51
snR49snR49 RGA1P39083 1007 aa5.62□□□□□ -1.51
snR49snR49 SAS4Q04003 481 aa5.62□□□□□ -1.51
snR49snR49 TRK1P12685 1235 aa5.59□□□□□ -1.51
snR49snR49 YDR090CQ03193 310 aa5.58□□□□□ -1.52
snR49snR49 RPP1BP10622 106 aaKnown RBP5.57□□□□□ -1.52
snR49snR49 BUD20Q08004 166 aaPredicted RBP5.56□□□□□ -1.52
snR49snR49 YRR1Q12172 810 aa5.55□□□□□ -1.52
snR49snR49 GAP1P19145 602 aaPredicted RBP5.54□□□□□ -1.52
snR49snR49 YEL077CQ3E7X8 1277 aa5.54□□□□□ -1.52
snR49snR49 PRT1P06103 763 aaKnown RBP5.52□□□□□ -1.53
snR49snR49 MRF1P30775 413 aaPredicted RBP5.52□□□□□ -1.53
snR49snR49 KIC1P38692 1080 aa5.52□□□□□ -1.53
snR49snR49 STR2P47164 639 aa5.52□□□□□ -1.53
snR49snR49 ISM1P48526 1002 aa5.52□□□□□ -1.53
snR49snR49 PEX21P50091 288 aa5.51□□□□□ -1.53
snR49snR49 IFH1P39520 1085 aa5.49□□□□□ -1.53
snR49snR49 CSC1Q06538 782 aa5.49□□□□□ -1.53
snR49snR49 TUM1Q08686 304 aaKnown RBP5.49□□□□□ -1.53
snR49snR49 TFB4Q12004 338 aa5.49□□□□□ -1.53
snR49snR49 NUD1P32336 851 aa5.48□□□□□ -1.53
snR49snR49 REF2P42073 533 aaPredicted RBP5.47□□□□□ -1.53
snR49snR49 ERG12P07277 443 aa5.46□□□□□ -1.54
snR49snR49 YPR148CQ06523 435 aa5.46□□□□□ -1.54
snR49snR49 ORC6P38826 435 aa5.45□□□□□ -1.54
snR49snR49 TY1A-DR4O74302 440 aa5.44□□□□□ -1.54
snR49snR49 TY1A-HP0C2I4 478 aaKnown RBP5.44□□□□□ -1.54
snR49snR49 TY1A-AP0CX57 440 aa5.44□□□□□ -1.54
snR49snR49 TY1A-PR1P0CX58 440 aa5.44□□□□□ -1.54
snR49snR49 TY1A-ORP0CX59 440 aa5.44□□□□□ -1.54
snR49snR49 TY1A-PR2P0CX60 440 aa5.44□□□□□ -1.54
snR49snR49 TY1A-DR5P0CX65 440 aa5.44□□□□□ -1.54
snR49snR49 TY1A-ER2P0CX66 440 aa5.44□□□□□ -1.54
snR49snR49 TY1A-GR3P0CX67 440 aa5.44□□□□□ -1.54
snR49snR49 TY1A-LR1P0CX68 440 aa5.44□□□□□ -1.54
snR49snR49 TY1A-MR2P0CX69 440 aa5.44□□□□□ -1.54
snR49snR49 SEC2P17065 759 aa5.44□□□□□ -1.54
snR49snR49 CST6P40535 587 aa5.44□□□□□ -1.54
snR49snR49 TY1A-JR2P47099 440 aa5.44□□□□□ -1.54
snR49snR49 CLA4P48562 842 aa5.44□□□□□ -1.54
snR49snR49 TY1A-DR1Q03856 440 aa5.44□□□□□ -1.54
snR49snR49 TY1A-ML1Q04706 440 aaKnown RBP5.44□□□□□ -1.54
snR49snR49 TY1A-BRQ12217 440 aa5.44□□□□□ -1.54
snR49snR49 TY1A-NL2Q12470 440 aa5.44□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms