RNA–Protein interactions for RNA: YPR129W

SCD6, Transcript of Repressor of translation initiation, yeastyeast

Gene SCD6, Length 1,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD6YPR129W PTC4P38089 393 aa9.61□□□□□ -0.87
SCD6YPR129W YEL023CP39992 682 aa9.6□□□□□ -0.87
SCD6YPR129W CHL1P22516 861 aaPredicted RBP9.56□□□□□ -0.88
SCD6YPR129W PRE3P38624 215 aa9.53□□□□□ -0.88
SCD6YPR129W GRE2Q12068 342 aaKnown RBP9.53□□□□□ -0.88
SCD6YPR129W BCK2P33306 851 aa9.52□□□□□ -0.89
SCD6YPR129W MAK11P20484 414 aaKnown RBP9.49□□□□□ -0.89
SCD6YPR129W MIF2P35201 549 aa9.47□□□□□ -0.89
SCD6YPR129W RAM2P29703 316 aa9.45□□□□□ -0.9
SCD6YPR129W GUT1P32190 709 aa9.43□□□□□ -0.9
SCD6YPR129W PTC3P34221 468 aaKnown RBP9.43□□□□□ -0.9
SCD6YPR129W EDS1P38073 919 aa9.43□□□□□ -0.9
SCD6YPR129W ATH1P48016 1211 aa9.43□□□□□ -0.9
SCD6YPR129W PML39Q03760 334 aa9.41□□□□□ -0.9
SCD6YPR129W COQ8P27697 501 aa9.34□□□□□ -0.91
SCD6YPR129W NST1P53935 1240 aa9.34□□□□□ -0.91
SCD6YPR129W YDR344CQ05510 147 aa9.34□□□□□ -0.91
SCD6YPR129W ELP4Q02884 456 aaKnown RBP9.33□□□□□ -0.92
SCD6YPR129W VRP1P37370 817 aa9.31□□□□□ -0.92
SCD6YPR129W XDJ1P39102 459 aa9.29□□□□□ -0.92
SCD6YPR129W ARH1P48360 493 aa9.29□□□□□ -0.92
SCD6YPR129W SOL3P38858 249 aa9.28□□□□□ -0.92
SCD6YPR129W AI4P03878 556 aa9.26□□□□□ -0.93
SCD6YPR129W MPH3P0CE00 602 aa9.26□□□□□ -0.93
SCD6YPR129W MID1P41821 548 aa9.26□□□□□ -0.93
SCD6YPR129W NOP53Q12080 455 aaKnown RBP9.24□□□□□ -0.93
SCD6YPR129W PEX29Q03370 554 aa9.21□□□□□ -0.94
SCD6YPR129W SPT23P35210 1082 aa9.18□□□□□ -0.94
SCD6YPR129W ILV3P39522 585 aaKnown RBP9.17□□□□□ -0.94
SCD6YPR129W YGR273CP53329 174 aa9.16□□□□□ -0.94
SCD6YPR129W HAP5Q02516 242 aa9.14□□□□□ -0.95
SCD6YPR129W DPS1P04802 557 aaKnown RBP9.1□□□□□ -0.95
SCD6YPR129W BNI4P53858 892 aa9.1□□□□□ -0.95
SCD6YPR129W MPC54Q08550 464 aa9.08□□□□□ -0.96
SCD6YPR129W YML082WQ04533 649 aaKnown RBP9.05□□□□□ -0.96
SCD6YPR129W PTC2P39966 464 aaKnown RBP9.04□□□□□ -0.96
SCD6YPR129W SLI15P38283 698 aa9.02□□□□□ -0.97
SCD6YPR129W NMA111P53920 997 aa9.01□□□□□ -0.97
SCD6YPR129W DPL1Q05567 589 aa8.99□□□□□ -0.97
SCD6YPR129W KEX1P09620 729 aa8.94□□□□□ -0.98
SCD6YPR129W SET1P38827 1080 aaKnown RBP8.9□□□□□ -0.98
SCD6YPR129W ISU2Q12056 156 aa8.89□□□□□ -0.99
SCD6YPR129W SRC1Q03707 834 aa8.88□□□□□ -0.99
SCD6YPR129W YPR015CQ12531 247 aa8.86□□□□□ -0.99
SCD6YPR129W YLR326WQ06170 240 aaKnown RBP8.85□□□□□ -0.99
SCD6YPR129W RAM1P22007 431 aa8.84□□□□□ -0.99
SCD6YPR129W CDC73Q06697 393 aa8.84□□□□□ -0.99
SCD6YPR129W UBP14P38237 781 aaKnown RBP8.83□□□□□ -1
SCD6YPR129W VHR2P40041 505 aa8.81□□□□□ -1
SCD6YPR129W RAS1P01119 309 aa8.77□□□□□ -1.01
SCD6YPR129W RAD54P32863 898 aa8.77□□□□□ -1.01
SCD6YPR129W PCS60P38137 543 aaKnown RBP RIP-Chip data8.77□□□□□ -1.01not detected
SCD6YPR129W GYP1Q08484 637 aa8.77□□□□□ -1.01
SCD6YPR129W RPP1BP10622 106 aaKnown RBP8.75□□□□□ -1.01
SCD6YPR129W PDR1P12383 1068 aa8.73□□□□□ -1.01
SCD6YPR129W SAS4Q04003 481 aa8.71□□□□□ -1.02
SCD6YPR129W AMS1P22855 1083 aa8.7□□□□□ -1.02
SCD6YPR129W IFH1P39520 1085 aa8.7□□□□□ -1.02
SCD6YPR129W YDR090CQ03193 310 aa8.66□□□□□ -1.02
SCD6YPR129W SDH2P21801 266 aa8.64□□□□□ -1.03
SCD6YPR129W KIC1P38692 1080 aa8.64□□□□□ -1.03
SCD6YPR129W RGA2Q06407 1009 aa8.63□□□□□ -1.03
SCD6YPR129W TRK1P12685 1235 aa8.62□□□□□ -1.03
SCD6YPR129W PEX21P50091 288 aa8.61□□□□□ -1.03
SCD6YPR129W YEL077CQ3E7X8 1277 aa8.61□□□□□ -1.03
SCD6YPR129W GAP1P19145 602 aaPredicted RBP8.59□□□□□ -1.03
SCD6YPR129W YRR1Q12172 810 aa8.59□□□□□ -1.03
SCD6YPR129W MRF1P30775 413 aaPredicted RBP8.58□□□□□ -1.04
SCD6YPR129W YPR148CQ06523 435 aa8.58□□□□□ -1.04
SCD6YPR129W CSC1Q06538 782 aa8.58□□□□□ -1.04
SCD6YPR129W BUD20Q08004 166 aaPredicted RBP8.58□□□□□ -1.04
SCD6YPR129W RGA1P39083 1007 aa8.57□□□□□ -1.04
SCD6YPR129W REF2P42073 533 aaPredicted RBP8.57□□□□□ -1.04
SCD6YPR129W TFB4Q12004 338 aa8.57□□□□□ -1.04
SCD6YPR129W PRT1P06103 763 aaKnown RBP8.56□□□□□ -1.04
SCD6YPR129W STR2P47164 639 aa8.53□□□□□ -1.04
SCD6YPR129W TUM1Q08686 304 aaKnown RBP8.51□□□□□ -1.05
SCD6YPR129W NUD1P32336 851 aa8.5□□□□□ -1.05
SCD6YPR129W ORC6P38826 435 aa8.5□□□□□ -1.05
SCD6YPR129W ISM1P48526 1002 aa8.5□□□□□ -1.05
SCD6YPR129W ERG12P07277 443 aa8.47□□□□□ -1.05
SCD6YPR129W NPL4P33755 580 aa8.46□□□□□ -1.06
SCD6YPR129W MAK21Q12176 1025 aaKnown RBP8.46□□□□□ -1.06
SCD6YPR129W VPS70P47161 811 aa8.44□□□□□ -1.06
SCD6YPR129W COX6P00427 148 aa8.43□□□□□ -1.06
SCD6YPR129W GCD11P32481 527 aaKnown RBP8.4□□□□□ -1.06
SCD6YPR129W MVP1P40959 511 aaKnown RBP8.4□□□□□ -1.06
SCD6YPR129W TY1A-DR4O74302 440 aa8.39□□□□□ -1.07
SCD6YPR129W TY1A-HP0C2I4 478 aaKnown RBP8.39□□□□□ -1.07
SCD6YPR129W TY1A-AP0CX57 440 aa8.39□□□□□ -1.07
SCD6YPR129W TY1A-PR1P0CX58 440 aa8.39□□□□□ -1.07
SCD6YPR129W TY1A-ORP0CX59 440 aa8.39□□□□□ -1.07
SCD6YPR129W TY1A-PR2P0CX60 440 aa8.39□□□□□ -1.07
SCD6YPR129W TY1A-DR5P0CX65 440 aa8.39□□□□□ -1.07
SCD6YPR129W TY1A-ER2P0CX66 440 aa8.39□□□□□ -1.07
SCD6YPR129W TY1A-GR3P0CX67 440 aa8.39□□□□□ -1.07
SCD6YPR129W TY1A-LR1P0CX68 440 aa8.39□□□□□ -1.07
SCD6YPR129W TY1A-MR2P0CX69 440 aa8.39□□□□□ -1.07
SCD6YPR129W TY1A-JR2P47099 440 aa8.39□□□□□ -1.07
SCD6YPR129W TY1A-DR1Q03856 440 aa8.39□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms