RNA–Protein interactions for RNA: YPR094W

RDS3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene RDS3, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDS3YPR094W CST9Q06032 482 aa2.54□□□□□ -2
RDS3YPR094W DCW1P36091 449 aa2.53□□□□□ -2
RDS3YPR094W PTC4P38089 393 aa2.53□□□□□ -2
RDS3YPR094W GYP5Q12344 894 aa2.53□□□□□ -2
RDS3YPR094W YEL023CP39992 682 aa2.52□□□□□ -2.01
RDS3YPR094W HTA1P04911 132 aaKnown RBP2.51□□□□□ -2.01
RDS3YPR094W HTA2P04912 132 aa2.51□□□□□ -2.01
RDS3YPR094W ABP1P15891 592 aaKnown RBP2.51□□□□□ -2.01
RDS3YPR094W ELP4Q02884 456 aaKnown RBP2.51□□□□□ -2.01
RDS3YPR094W SSP1P38871 571 aa2.49□□□□□ -2.01
RDS3YPR094W PML39Q03760 334 aa2.49□□□□□ -2.01
RDS3YPR094W ARP8Q12386 881 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
RDS3YPR094W MGA2P40578 1113 aa2.47□□□□□ -2.01
RDS3YPR094W ARH1P48360 493 aa2.46□□□□□ -2.02
RDS3YPR094W YPL062WQ02781 134 aa2.46□□□□□ -2.02
RDS3YPR094W MID1P41821 548 aa2.45□□□□□ -2.02
RDS3YPR094W NST1P53935 1240 aa2.43□□□□□ -2.02
RDS3YPR094W GRE2Q12068 342 aaKnown RBP2.43□□□□□ -2.02
RDS3YPR094W SPT23P35210 1082 aa2.42□□□□□ -2.02
RDS3YPR094W RAS1P01119 309 aa2.4□□□□□ -2.03
RDS3YPR094W TRK1P12685 1235 aa2.4□□□□□ -2.03
RDS3YPR094W GUT1P32190 709 aa2.4□□□□□ -2.03
RDS3YPR094W TFA1P36100 482 aa2.4□□□□□ -2.03
RDS3YPR094W EDS1P38073 919 aa2.4□□□□□ -2.03
RDS3YPR094W SOL3P38858 249 aa2.4□□□□□ -2.03
RDS3YPR094W PEX29Q03370 554 aa2.4□□□□□ -2.03
RDS3YPR094W PTC3P34221 468 aaKnown RBP2.39□□□□□ -2.03
RDS3YPR094W MIF2P35201 549 aa2.39□□□□□ -2.03
RDS3YPR094W ATH1P48016 1211 aa2.39□□□□□ -2.03
RDS3YPR094W ILV3P39522 585 aaKnown RBP2.38□□□□□ -2.03
RDS3YPR094W BNI4P53858 892 aa2.38□□□□□ -2.03
RDS3YPR094W HAP5Q02516 242 aa2.38□□□□□ -2.03
RDS3YPR094W YML082WQ04533 649 aaKnown RBP2.38□□□□□ -2.03
RDS3YPR094W MPH3P0CE00 602 aa2.37□□□□□ -2.03
RDS3YPR094W AI4P03878 556 aa2.36□□□□□ -2.03
RDS3YPR094W PTC2P39966 464 aaKnown RBP2.36□□□□□ -2.03
RDS3YPR094W MAK11P20484 414 aaKnown RBP2.35□□□□□ -2.03
RDS3YPR094W RAM2P29703 316 aa2.35□□□□□ -2.03
RDS3YPR094W MPC54Q08550 464 aa2.35□□□□□ -2.03
RDS3YPR094W YPR015CQ12531 247 aa2.35□□□□□ -2.03
RDS3YPR094W NMA111P53920 997 aa2.34□□□□□ -2.03
RDS3YPR094W AMS1P22855 1083 aa2.33□□□□□ -2.04
RDS3YPR094W GBP2P25555 427 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
RDS3YPR094W COQ8P27697 501 aa2.33□□□□□ -2.04
RDS3YPR094W RAM1P22007 431 aa2.32□□□□□ -2.04
RDS3YPR094W YGR273CP53329 174 aa2.32□□□□□ -2.04
RDS3YPR094W SDH2P21801 266 aa2.31□□□□□ -2.04
RDS3YPR094W SLI15P38283 698 aa2.31□□□□□ -2.04
RDS3YPR094W GAR1P28007 205 aaKnown RBP2.3□□□□□ -2.04
RDS3YPR094W DPL1Q05567 589 aa2.3□□□□□ -2.04
RDS3YPR094W GYP1Q08484 637 aa2.29□□□□□ -2.04
RDS3YPR094W PDR1P12383 1068 aa2.27□□□□□ -2.05
RDS3YPR094W CDC73Q06697 393 aa2.27□□□□□ -2.05
RDS3YPR094W ISU2Q12056 156 aa2.27□□□□□ -2.05
RDS3YPR094W BRE2P43132 505 aa2.26□□□□□ -2.05
RDS3YPR094W GCR2Q01722 534 aa2.26□□□□□ -2.05
RDS3YPR094W KEX1P09620 729 aa2.24□□□□□ -2.05
RDS3YPR094W SAS4Q04003 481 aa2.24□□□□□ -2.05
RDS3YPR094W NOP53Q12080 455 aaKnown RBP2.24□□□□□ -2.05
RDS3YPR094W YEL077CQ3E7X8 1277 aa2.24□□□□□ -2.05
RDS3YPR094W AIR1P40507 360 aaKnown RBP2.23□□□□□ -2.05
RDS3YPR094W CLA4P48562 842 aa2.22□□□□□ -2.05
RDS3YPR094W MTC5Q03897 1148 aa2.22□□□□□ -2.05
RDS3YPR094W BUD20Q08004 166 aaPredicted RBP2.21□□□□□ -2.06
RDS3YPR094W PCS60P38137 543 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
RDS3YPR094W UBP14P38237 781 aaKnown RBP2.2□□□□□ -2.06
RDS3YPR094W YLR326WQ06170 240 aaKnown RBP2.2□□□□□ -2.06
RDS3YPR094W PRT1P06103 763 aaKnown RBP2.19□□□□□ -2.06
RDS3YPR094W MRF1P30775 413 aaPredicted RBP2.19□□□□□ -2.06
RDS3YPR094W CST6P40535 587 aa2.19□□□□□ -2.06
RDS3YPR094W MET22P32179 357 aa2.18□□□□□ -2.06
RDS3YPR094W VHR2P40041 505 aa2.18□□□□□ -2.06
RDS3YPR094W STR2P47164 639 aa2.18□□□□□ -2.06
RDS3YPR094W ISM1P48526 1002 aa2.18□□□□□ -2.06
RDS3YPR094W ENV9Q08651 330 aa2.18□□□□□ -2.06
RDS3YPR094W ERG12P07277 443 aa2.17□□□□□ -2.06
RDS3YPR094W YRR1Q12172 810 aa2.17□□□□□ -2.06
RDS3YPR094W LAM6Q08001 693 aa2.16□□□□□ -2.06
RDS3YPR094W TY1A-DR4O74302 440 aa2.15□□□□□ -2.07
RDS3YPR094W TY1A-HP0C2I4 478 aaKnown RBP2.15□□□□□ -2.07
RDS3YPR094W TY1A-AP0CX57 440 aa2.15□□□□□ -2.07
RDS3YPR094W TY1A-PR1P0CX58 440 aa2.15□□□□□ -2.07
RDS3YPR094W TY1A-ORP0CX59 440 aa2.15□□□□□ -2.07
RDS3YPR094W TY1A-PR2P0CX60 440 aa2.15□□□□□ -2.07
RDS3YPR094W TY1A-DR5P0CX65 440 aa2.15□□□□□ -2.07
RDS3YPR094W TY1A-ER2P0CX66 440 aa2.15□□□□□ -2.07
RDS3YPR094W TY1A-GR3P0CX67 440 aa2.15□□□□□ -2.07
RDS3YPR094W TY1A-LR1P0CX68 440 aa2.15□□□□□ -2.07
RDS3YPR094W TY1A-MR2P0CX69 440 aa2.15□□□□□ -2.07
RDS3YPR094W RAD54P32863 898 aa2.15□□□□□ -2.07
RDS3YPR094W TY1A-JR2P47099 440 aa2.15□□□□□ -2.07
RDS3YPR094W TY1A-DR1Q03856 440 aa2.15□□□□□ -2.07
RDS3YPR094W YDR444WQ04093 687 aa2.15□□□□□ -2.07
RDS3YPR094W TY1A-ML1Q04706 440 aaKnown RBP2.15□□□□□ -2.07
RDS3YPR094W TY1A-BRQ12217 440 aa2.15□□□□□ -2.07
RDS3YPR094W TY1A-NL2Q12470 440 aa2.15□□□□□ -2.07
RDS3YPR094W TY1A-GR2Q12485 440 aa2.15□□□□□ -2.07
RDS3YPR094W CDC4P07834 779 aa2.14□□□□□ -2.07
RDS3YPR094W SEC2P17065 759 aa2.14□□□□□ -2.07
RDS3YPR094W GAP1P19145 602 aaPredicted RBP2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms