RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W PTC4P38089 393 aa7.72□□□□□ -1.17
YOP1YPR028W DCW1P36091 449 aa7.7□□□□□ -1.18
YOP1YPR028W YEL023CP39992 682 aa7.69□□□□□ -1.18
YOP1YPR028W MGA2P40578 1113 aa7.69□□□□□ -1.18
YOP1YPR028W XDJ1P39102 459 aa7.67□□□□□ -1.18
YOP1YPR028W VRP1P37370 817 aa7.66□□□□□ -1.18
YOP1YPR028W RCR1P38212 213 aa7.65□□□□□ -1.18
YOP1YPR028W ELP4Q02884 456 aaKnown RBP7.58□□□□□ -1.2
YOP1YPR028W YDR344CQ05510 147 aa7.57□□□□□ -1.2
YOP1YPR028W PML39Q03760 334 aa7.56□□□□□ -1.2
YOP1YPR028W DPS1P04802 557 aaKnown RBP7.55□□□□□ -1.2
YOP1YPR028W GRE2Q12068 342 aaKnown RBP7.51□□□□□ -1.21
YOP1YPR028W ARH1P48360 493 aa7.47□□□□□ -1.21
YOP1YPR028W RGA2Q06407 1009 aa7.43□□□□□ -1.22
YOP1YPR028W ATH1P48016 1211 aa7.41□□□□□ -1.22
YOP1YPR028W GUT1P32190 709 aa7.4□□□□□ -1.22
YOP1YPR028W SPT23P35210 1082 aa7.4□□□□□ -1.22
YOP1YPR028W MID1P41821 548 aa7.4□□□□□ -1.22
YOP1YPR028W MIF2P35201 549 aa7.38□□□□□ -1.23
YOP1YPR028W PEX29Q03370 554 aa7.36□□□□□ -1.23
YOP1YPR028W SRC1Q03707 834 aa7.36□□□□□ -1.23
YOP1YPR028W PTC3P34221 468 aaKnown RBP7.35□□□□□ -1.23
YOP1YPR028W NST1P53935 1240 aa7.34□□□□□ -1.23
YOP1YPR028W EDS1P38073 919 aa7.32□□□□□ -1.24
YOP1YPR028W HAP5Q02516 242 aa7.32□□□□□ -1.24
YOP1YPR028W MAK11P20484 414 aaKnown RBP7.31□□□□□ -1.24
YOP1YPR028W RGA1P39083 1007 aa7.31□□□□□ -1.24
YOP1YPR028W MPH3P0CE00 602 aa7.29□□□□□ -1.24
YOP1YPR028W AI4P03878 556 aa7.28□□□□□ -1.24
YOP1YPR028W SOL3P38858 249 aa7.28□□□□□ -1.24
YOP1YPR028W BNI4P53858 892 aa7.28□□□□□ -1.24
YOP1YPR028W YML082WQ04533 649 aaKnown RBP7.28□□□□□ -1.24
YOP1YPR028W PTC2P39966 464 aaKnown RBP7.27□□□□□ -1.25
YOP1YPR028W RAM2P29703 316 aa7.22□□□□□ -1.25
YOP1YPR028W ILV3P39522 585 aaKnown RBP7.21□□□□□ -1.26
YOP1YPR028W COQ8P27697 501 aa7.2□□□□□ -1.26
YOP1YPR028W MPC54Q08550 464 aa7.19□□□□□ -1.26
YOP1YPR028W NMA111P53920 997 aa7.16□□□□□ -1.26
YOP1YPR028W RAS1P01119 309 aa7.15□□□□□ -1.26
YOP1YPR028W YGR273CP53329 174 aa7.12□□□□□ -1.27
YOP1YPR028W DPL1Q05567 589 aa7.09□□□□□ -1.27
YOP1YPR028W SLI15P38283 698 aa7.08□□□□□ -1.28
YOP1YPR028W NOP53Q12080 455 aaKnown RBP7.07□□□□□ -1.28
YOP1YPR028W YPR015CQ12531 247 aa7.06□□□□□ -1.28
YOP1YPR028W TRK1P12685 1235 aa7.05□□□□□ -1.28
YOP1YPR028W AMS1P22855 1083 aa7.03□□□□□ -1.28
YOP1YPR028W GYP1Q08484 637 aa7.03□□□□□ -1.28
YOP1YPR028W RAM1P22007 431 aa7.02□□□□□ -1.29
YOP1YPR028W ISU2Q12056 156 aa7.01□□□□□ -1.29
YOP1YPR028W SAS4Q04003 481 aa6.94□□□□□ -1.3
YOP1YPR028W KEX1P09620 729 aa6.92□□□□□ -1.3
YOP1YPR028W SDH2P21801 266 aa6.91□□□□□ -1.3
YOP1YPR028W CDC73Q06697 393 aa6.91□□□□□ -1.3
YOP1YPR028W YPL062WQ02781 134 aa6.9□□□□□ -1.3
YOP1YPR028W PDR1P12383 1068 aa6.89□□□□□ -1.31
YOP1YPR028W YEL077CQ3E7X8 1277 aa6.89□□□□□ -1.31
YOP1YPR028W MRF1P30775 413 aaPredicted RBP6.84□□□□□ -1.31
YOP1YPR028W YLR326WQ06170 240 aaKnown RBP6.8□□□□□ -1.32
YOP1YPR028W RPP1BP10622 106 aaKnown RBP6.78□□□□□ -1.32
YOP1YPR028W UBP14P38237 781 aaKnown RBP6.78□□□□□ -1.32
YOP1YPR028W PCS60P38137 543 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
YOP1YPR028W BRE2P43132 505 aa6.76□□□□□ -1.33
YOP1YPR028W VHR2P40041 505 aa6.75□□□□□ -1.33
YOP1YPR028W GCR2Q01722 534 aa6.75□□□□□ -1.33
YOP1YPR028W BUD20Q08004 166 aaPredicted RBP6.75□□□□□ -1.33
YOP1YPR028W PRT1P06103 763 aaKnown RBP6.74□□□□□ -1.33
YOP1YPR028W GBP2P25555 427 aaKnown RBP RIP-Chip data6.74□□□□□ -1.33not detected
YOP1YPR028W GAR1P28007 205 aaKnown RBP6.74□□□□□ -1.33
YOP1YPR028W ERG12P07277 443 aa6.73□□□□□ -1.33
YOP1YPR028W RAD54P32863 898 aa6.73□□□□□ -1.33
YOP1YPR028W AIR1P40507 360 aaKnown RBP6.7□□□□□ -1.34
YOP1YPR028W YRR1Q12172 810 aa6.69□□□□□ -1.34
YOP1YPR028W STR2P47164 639 aa6.67□□□□□ -1.34
YOP1YPR028W PEX21P50091 288 aa6.67□□□□□ -1.34
YOP1YPR028W SET1P38827 1080 aaKnown RBP6.66□□□□□ -1.34
YOP1YPR028W CST6P40535 587 aa6.66□□□□□ -1.34
YOP1YPR028W ISM1P48526 1002 aa6.66□□□□□ -1.34
YOP1YPR028W CLA4P48562 842 aa6.66□□□□□ -1.34
YOP1YPR028W NUD1P32336 851 aa6.61□□□□□ -1.35
YOP1YPR028W LAM6Q08001 693 aa6.61□□□□□ -1.35
YOP1YPR028W KIC1P38692 1080 aa6.6□□□□□ -1.35
YOP1YPR028W TFB4Q12004 338 aa6.6□□□□□ -1.35
YOP1YPR028W GAP1P19145 602 aaPredicted RBP6.59□□□□□ -1.35
YOP1YPR028W SPT16P32558 1035 aaKnown RBP6.59□□□□□ -1.35
YOP1YPR028W NPL4P33755 580 aa6.59□□□□□ -1.35
YOP1YPR028W CSC1Q06538 782 aa6.59□□□□□ -1.35
YOP1YPR028W TUM1Q08686 304 aaKnown RBP6.59□□□□□ -1.35
YOP1YPR028W CDC4P07834 779 aa6.58□□□□□ -1.36
YOP1YPR028W MET22P32179 357 aa6.58□□□□□ -1.36
YOP1YPR028W YDR090CQ03193 310 aa6.58□□□□□ -1.36
YOP1YPR028W GCD11P32481 527 aaKnown RBP6.57□□□□□ -1.36
YOP1YPR028W FRK1Q03002 865 aaPredicted RBP6.56□□□□□ -1.36
YOP1YPR028W ENV9Q08651 330 aa6.55□□□□□ -1.36
YOP1YPR028W TY1A-DR4O74302 440 aa6.54□□□□□ -1.36
YOP1YPR028W TY1A-HP0C2I4 478 aaKnown RBP6.54□□□□□ -1.36
YOP1YPR028W TY1A-AP0CX57 440 aa6.54□□□□□ -1.36
YOP1YPR028W TY1A-PR1P0CX58 440 aa6.54□□□□□ -1.36
YOP1YPR028W TY1A-ORP0CX59 440 aa6.54□□□□□ -1.36
YOP1YPR028W TY1A-PR2P0CX60 440 aa6.54□□□□□ -1.36
YOP1YPR028W TY1A-DR5P0CX65 440 aa6.54□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms