RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C DCW1P36091 449 aa9.52□□□□□ -0.89
CCL1YPR025C PTC4P38089 393 aa9.51□□□□□ -0.89
CCL1YPR025C YEL023CP39992 682 aa9.51□□□□□ -0.89
CCL1YPR025C RCR1P38212 213 aa9.48□□□□□ -0.89
CCL1YPR025C MGA2P40578 1113 aa9.48□□□□□ -0.89
CCL1YPR025C VRP1P37370 817 aa9.47□□□□□ -0.89
CCL1YPR025C XDJ1P39102 459 aa9.46□□□□□ -0.9
CCL1YPR025C YDR344CQ05510 147 aa9.38□□□□□ -0.91
CCL1YPR025C ELP4Q02884 456 aaKnown RBP9.37□□□□□ -0.91
CCL1YPR025C DPS1P04802 557 aaKnown RBP9.36□□□□□ -0.91
CCL1YPR025C PML39Q03760 334 aa9.35□□□□□ -0.91
CCL1YPR025C GRE2Q12068 342 aaKnown RBP9.28□□□□□ -0.92
CCL1YPR025C ARH1P48360 493 aa9.22□□□□□ -0.93
CCL1YPR025C RGA2Q06407 1009 aa9.19□□□□□ -0.94
CCL1YPR025C ATH1P48016 1211 aa9.16□□□□□ -0.94
CCL1YPR025C MID1P41821 548 aa9.15□□□□□ -0.94
CCL1YPR025C SPT23P35210 1082 aa9.13□□□□□ -0.95
CCL1YPR025C GUT1P32190 709 aa9.12□□□□□ -0.95
CCL1YPR025C MIF2P35201 549 aa9.12□□□□□ -0.95
CCL1YPR025C PEX29Q03370 554 aa9.12□□□□□ -0.95
CCL1YPR025C SRC1Q03707 834 aa9.12□□□□□ -0.95
CCL1YPR025C PTC3P34221 468 aaKnown RBP9.07□□□□□ -0.96
CCL1YPR025C NST1P53935 1240 aa9.06□□□□□ -0.96
CCL1YPR025C EDS1P38073 919 aa9.04□□□□□ -0.96
CCL1YPR025C RGA1P39083 1007 aa9.04□□□□□ -0.96
CCL1YPR025C HAP5Q02516 242 aa9.04□□□□□ -0.96
CCL1YPR025C MAK11P20484 414 aaKnown RBP9.02□□□□□ -0.97
CCL1YPR025C BNI4P53858 892 aa9□□□□□ -0.97
CCL1YPR025C RQC2Q12532 1038 aaKnown RBP9□□□□□ -0.97
CCL1YPR025C MPH3P0CE00 602 aa8.99□□□□□ -0.97
CCL1YPR025C AI4P03878 556 aa8.98□□□□□ -0.97
CCL1YPR025C SOL3P38858 249 aa8.98□□□□□ -0.97
CCL1YPR025C PTC2P39966 464 aaKnown RBP8.98□□□□□ -0.97
CCL1YPR025C YML082WQ04533 649 aaKnown RBP8.96□□□□□ -0.98
CCL1YPR025C ILV3P39522 585 aaKnown RBP8.92□□□□□ -0.98
CCL1YPR025C RAM2P29703 316 aa8.91□□□□□ -0.98
CCL1YPR025C COQ8P27697 501 aa8.89□□□□□ -0.99
CCL1YPR025C MPC54Q08550 464 aa8.89□□□□□ -0.99
CCL1YPR025C RAS1P01119 309 aa8.84□□□□□ -0.99
CCL1YPR025C NMA111P53920 997 aa8.83□□□□□ -1
CCL1YPR025C DMA1P38823 416 aa8.81□□□□□ -1
CCL1YPR025C YGR273CP53329 174 aa8.79□□□□□ -1
CCL1YPR025C DPL1Q05567 589 aa8.75□□□□□ -1.01
CCL1YPR025C SLI15P38283 698 aa8.74□□□□□ -1.01
CCL1YPR025C YPR015CQ12531 247 aa8.74□□□□□ -1.01
CCL1YPR025C TRK1P12685 1235 aa8.72□□□□□ -1.01
CCL1YPR025C AMS1P22855 1083 aa8.7□□□□□ -1.02
CCL1YPR025C GYP1Q08484 637 aa8.69□□□□□ -1.02
CCL1YPR025C RAM1P22007 431 aa8.67□□□□□ -1.02
CCL1YPR025C NOP53Q12080 455 aaKnown RBP8.67□□□□□ -1.02
CCL1YPR025C ISU2Q12056 156 aa8.63□□□□□ -1.03
CCL1YPR025C SDH2P21801 266 aa8.55□□□□□ -1.04
CCL1YPR025C SAS4Q04003 481 aa8.55□□□□□ -1.04
CCL1YPR025C KEX1P09620 729 aa8.54□□□□□ -1.04
CCL1YPR025C PDR1P12383 1068 aa8.53□□□□□ -1.04
CCL1YPR025C YPL062WQ02781 134 aa8.53□□□□□ -1.04
CCL1YPR025C CDC73Q06697 393 aa8.53□□□□□ -1.04
CCL1YPR025C YEL077CQ3E7X8 1277 aa8.52□□□□□ -1.05
CCL1YPR025C MRF1P30775 413 aaPredicted RBP8.42□□□□□ -1.06
CCL1YPR025C YLR326WQ06170 240 aaKnown RBP8.38□□□□□ -1.07
CCL1YPR025C BRE2P43132 505 aa8.37□□□□□ -1.07
CCL1YPR025C RPP1BP10622 106 aaKnown RBP8.36□□□□□ -1.07
CCL1YPR025C VHR2P40041 505 aa8.35□□□□□ -1.07
CCL1YPR025C GBP2P25555 427 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
CCL1YPR025C GAR1P28007 205 aaKnown RBP8.34□□□□□ -1.07
CCL1YPR025C PCS60P38137 543 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08 RIP-Chip
CCL1YPR025C UBP14P38237 781 aaKnown RBP8.33□□□□□ -1.08
CCL1YPR025C SET1P38827 1080 aaKnown RBP8.33□□□□□ -1.08
CCL1YPR025C GCR2Q01722 534 aa8.32□□□□□ -1.08
CCL1YPR025C BUD20Q08004 166 aaPredicted RBP8.32□□□□□ -1.08
CCL1YPR025C PRT1P06103 763 aaKnown RBP8.31□□□□□ -1.08
CCL1YPR025C RAD54P32863 898 aa8.31□□□□□ -1.08
CCL1YPR025C ERG12P07277 443 aa8.3□□□□□ -1.08
CCL1YPR025C AIR1P40507 360 aaKnown RBP8.3□□□□□ -1.08
CCL1YPR025C SAS10Q12136 610 aaPredicted RBP8.27□□□□□ -1.09
CCL1YPR025C YRR1Q12172 810 aa8.26□□□□□ -1.09
CCL1YPR025C STR2P47164 639 aa8.24□□□□□ -1.09
CCL1YPR025C CLA4P48562 842 aa8.24□□□□□ -1.09
CCL1YPR025C PEX21P50091 288 aa8.24□□□□□ -1.09
CCL1YPR025C CST6P40535 587 aa8.23□□□□□ -1.09
CCL1YPR025C ISM1P48526 1002 aa8.21□□□□□ -1.1
CCL1YPR025C NUD1P32336 851 aa8.17□□□□□ -1.1
CCL1YPR025C LAM6Q08001 693 aa8.17□□□□□ -1.1
CCL1YPR025C VPS70P47161 811 aa8.16□□□□□ -1.1
CCL1YPR025C KIC1P38692 1080 aa8.15□□□□□ -1.1
CCL1YPR025C IFH1P39520 1085 aa8.15□□□□□ -1.1
CCL1YPR025C SPT16P32558 1035 aaKnown RBP8.14□□□□□ -1.11
CCL1YPR025C NPL4P33755 580 aa8.14□□□□□ -1.11
CCL1YPR025C FRK1Q03002 865 aaPredicted RBP8.13□□□□□ -1.11
CCL1YPR025C YPR148CQ06523 435 aa8.13□□□□□ -1.11
CCL1YPR025C TUM1Q08686 304 aaKnown RBP8.13□□□□□ -1.11
CCL1YPR025C TFB4Q12004 338 aa8.13□□□□□ -1.11
CCL1YPR025C CDC4P07834 779 aa8.12□□□□□ -1.11
CCL1YPR025C YDR090CQ03193 310 aa8.12□□□□□ -1.11
CCL1YPR025C GAP1P19145 602 aaPredicted RBP8.11□□□□□ -1.11
CCL1YPR025C MET22P32179 357 aa8.11□□□□□ -1.11
CCL1YPR025C CSC1Q06538 782 aa8.11□□□□□ -1.11
CCL1YPR025C GCD11P32481 527 aaKnown RBP8.09□□□□□ -1.11
CCL1YPR025C ENV9Q08651 330 aa8.09□□□□□ -1.11
CCL1YPR025C TY1A-DR4O74302 440 aa8.08□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms