RNA–Protein interactions for RNA: YPR023C

EAF3, Transcript of Component of the Rpd3S histone deacetylase complex, yeastyeast

Gene EAF3, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAF3YPR023C MLP2P40457 1679 aa13.59□□□□□ -0.23
EAF3YPR023C MET5P47169 1442 aa13.58□□□□□ -0.24
EAF3YPR023C PDR15Q04182 1529 aaKnown RBP13.58□□□□□ -0.24
EAF3YPR023C ULS1Q08562 1619 aa13.57□□□□□ -0.24
EAF3YPR023C NTE1Q04958 1679 aa13.56□□□□□ -0.24
EAF3YPR023C NUP159P40477 1460 aa13.55□□□□□ -0.24
EAF3YPR023C IFH1P39520 1085 aa13.53□□□□□ -0.24
EAF3YPR023C RPO21P04050 1733 aaKnown RBP13.52□□□□□ -0.25
EAF3YPR023C RTT106P40161 455 aa13.48□□□□□ -0.25
EAF3YPR023C GEA1P47102 1408 aaPredicted RBP13.46□□□□□ -0.26
EAF3YPR023C GEA2P39993 1459 aaKnown RBP13.43□□□□□ -0.26
EAF3YPR023C YRF1-1P0CX20 1796 aa13.43□□□□□ -0.26
EAF3YPR023C YRF1-5P0CX21 1796 aa13.43□□□□□ -0.26
EAF3YPR023C YRF1-8P0CX22 1796 aa13.43□□□□□ -0.26
EAF3YPR023C MET10P39692 1035 aa13.37□□□□□ -0.27
EAF3YPR023C IRC20Q06554 1556 aa13.37□□□□□ -0.27
EAF3YPR023C VPS15P22219 1454 aa13.36□□□□□ -0.27
EAF3YPR023C TY3B-GQ99315 1547 aa13.34□□□□□ -0.27
EAF3YPR023C LTE1P07866 1435 aa13.3□□□□□ -0.28
EAF3YPR023C PDR12Q02785 1511 aa13.3□□□□□ -0.28
EAF3YPR023C SPO14P36126 1683 aa13.3□□□□□ -0.28
EAF3YPR023C CAT8P39113 1433 aa13.26□□□□□ -0.29
EAF3YPR023C NUP157P40064 1391 aaKnown RBP13.26□□□□□ -0.29
EAF3YPR023C GDB1Q06625 1536 aa13.26□□□□□ -0.29
EAF3YPR023C IKI3Q06706 1349 aaKnown RBP13.26□□□□□ -0.29
EAF3YPR023C YBT1P32386 1661 aa13.23□□□□□ -0.29
EAF3YPR023C PDR10P51533 1564 aa13.23□□□□□ -0.29
EAF3YPR023C NUP170P38181 1502 aa13.17□□□□□ -0.3
EAF3YPR023C IQG1Q12280 1495 aa13.14□□□□□ -0.31
EAF3YPR023C ARO1P08566 1588 aaKnown RBP13.13□□□□□ -0.31
EAF3YPR023C CKB1P43639 278 aa13.13□□□□□ -0.31
EAF3YPR023C SSM4P40318 1319 aa13.13□□□□□ -0.31
EAF3YPR023C DRS2P39524 1355 aa13.12□□□□□ -0.31
EAF3YPR023C ITT1Q04638 464 aa13.1□□□□□ -0.31
EAF3YPR023C BUD3P25558 1636 aa13.07□□□□□ -0.32
EAF3YPR023C BNI1P41832 1953 aa13.07□□□□□ -0.32
EAF3YPR023C SRB8P25648 1427 aa13.05□□□□□ -0.32
EAF3YPR023C YSP2Q06681 1438 aa13.05□□□□□ -0.32
EAF3YPR023C TRM3Q07527 1436 aa12.96□□□□□ -0.33
EAF3YPR023C DOP1Q03921 1698 aa12.95□□□□□ -0.34
EAF3YPR023C MMS1Q06211 1407 aa12.94□□□□□ -0.34
EAF3YPR023C BNR1P40450 1375 aa12.94□□□□□ -0.34
EAF3YPR023C BUD21Q08492 214 aaPredicted RBP12.93□□□□□ -0.34
EAF3YPR023C SEC7P11075 2009 aaKnown RBP12.88□□□□□ -0.35
EAF3YPR023C CHC1P22137 1653 aaKnown RBP12.85□□□□□ -0.35
EAF3YPR023C DNF2Q12675 1612 aa12.75□□□□□ -0.37
EAF3YPR023C GCN2P15442 1659 aa12.73□□□□□ -0.37
EAF3YPR023C ABP1P15891 592 aaKnown RBP12.66□□□□□ -0.38
EAF3YPR023C YOR093CQ12275 1648 aa12.66□□□□□ -0.38
EAF3YPR023C VMR1P38735 1592 aa12.64□□□□□ -0.39
EAF3YPR023C NUP188P52593 1655 aaKnown RBP12.63□□□□□ -0.39
EAF3YPR023C PDR5P33302 1511 aaKnown RBP12.62□□□□□ -0.39
EAF3YPR023C URN1Q06525 465 aaKnown RBP12.61□□□□□ -0.39
EAF3YPR023C YAP3P38749 330 aa12.59□□□□□ -0.39
EAF3YPR023C PDR11P40550 1411 aa12.59□□□□□ -0.39
EAF3YPR023C IML1P47170 1584 aa12.58□□□□□ -0.4
EAF3YPR023C PAF1P38351 445 aa12.57□□□□□ -0.4
EAF3YPR023C NOP7P53261 605 aaKnown RBP12.57□□□□□ -0.4
EAF3YPR023C TYS1P36421 394 aaKnown RBP12.56□□□□□ -0.4
EAF3YPR023C IPL1P38991 367 aa12.56□□□□□ -0.4
EAF3YPR023C BFR2Q06631 534 aaKnown RBP12.52□□□□□ -0.41
EAF3YPR023C RAV1P47104 1357 aa12.5□□□□□ -0.41
EAF3YPR023C DNF3Q12674 1656 aa12.48□□□□□ -0.41
EAF3YPR023C RTC1Q08281 1341 aa12.44□□□□□ -0.42
EAF3YPR023C MAK10Q02197 733 aa12.38□□□□□ -0.43
EAF3YPR023C HAP1P0CE41 1502 aa12.37□□□□□ -0.43
EAF3YPR023C MIF2P35201 549 aa12.35□□□□□ -0.43
EAF3YPR023C NUP192P47054 1683 aa12.33□□□□□ -0.44
EAF3YPR023C TAF5P38129 798 aa12.33□□□□□ -0.44
EAF3YPR023C POL5P39985 1022 aaKnown RBP12.3□□□□□ -0.44
EAF3YPR023C ESL2P36168 1195 aa12.29□□□□□ -0.44
EAF3YPR023C ORC1P54784 914 aaPredicted RBP12.28□□□□□ -0.44
EAF3YPR023C RAD9P14737 1309 aa12.28□□□□□ -0.44
EAF3YPR023C ALD4P46367 519 aaKnown RBP12.26□□□□□ -0.45
EAF3YPR023C BCK1Q01389 1478 aa12.25□□□□□ -0.45
EAF3YPR023C CAB1Q04430 367 aa12.24□□□□□ -0.45
EAF3YPR023C TY3B-IQ7LHG5 1498 aaKnown RBP12.24□□□□□ -0.45
EAF3YPR023C KRE5P22023 1365 aa12.23□□□□□ -0.45
EAF3YPR023C MRX12P47084 519 aa12.22□□□□□ -0.45
EAF3YPR023C KIP3P53086 805 aaKnown RBP12.21□□□□□ -0.45
EAF3YPR023C RIA1P53893 1110 aa12.19□□□□□ -0.46
EAF3YPR023C TAF8Q03750 510 aa12.19□□□□□ -0.46
EAF3YPR023C CFT1Q06632 1357 aaKnown RBP12.17□□□□□ -0.46
EAF3YPR023C YLR419WQ06698 1435 aaKnown RBP12.14□□□□□ -0.47
EAF3YPR023C SPE2P21182 396 aa12.14□□□□□ -0.47
EAF3YPR023C USO1P25386 1790 aa12.14□□□□□ -0.47
EAF3YPR023C TY1B-NL2Q99337 1749 aaKnown RBP12.11□□□□□ -0.47
EAF3YPR023C NAP1P25293 417 aaKnown RBP12.11□□□□□ -0.47
EAF3YPR023C FAP1P53971 965 aa12.1□□□□□ -0.47
EAF3YPR023C YNR029CP53729 429 aaKnown RBP12.08□□□□□ -0.48
EAF3YPR023C YMR196WQ04336 1088 aa12.08□□□□□ -0.48
EAF3YPR023C MHP1P43638 1398 aa12.06□□□□□ -0.48
EAF3YPR023C THI12P42883 340 aa12.05□□□□□ -0.48
EAF3YPR023C THI5P43534 340 aa12.05□□□□□ -0.48
EAF3YPR023C THI11P47183 340 aa12.05□□□□□ -0.48
EAF3YPR023C THI13Q07748 340 aa12.05□□□□□ -0.48
EAF3YPR023C RCM1P53972 490 aa12.03□□□□□ -0.48
EAF3YPR023C CHZ1P40019 153 aaPredicted RBP12.02□□□□□ -0.49
EAF3YPR023C YFR006WP43590 535 aa12.02□□□□□ -0.49
EAF3YPR023C SCT1P32784 759 aa12□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms