RNA–Protein interactions for RNA: YPL230W

USV1, Transcript of Putative transcription factor containing a C2H2 zinc finger, yeastyeast

Gene USV1, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USV1YPL230W YEL023CP39992 682 aa9.66□□□□□ -0.86
USV1YPL230W PTC4P38089 393 aa9.65□□□□□ -0.86
USV1YPL230W CHL1P22516 861 aaPredicted RBP9.6□□□□□ -0.87
USV1YPL230W GRE2Q12068 342 aaKnown RBP9.59□□□□□ -0.87
USV1YPL230W BCK2P33306 851 aa9.57□□□□□ -0.88
USV1YPL230W PRE3P38624 215 aa9.56□□□□□ -0.88
USV1YPL230W MIF2P35201 549 aa9.55□□□□□ -0.88
USV1YPL230W MAK11P20484 414 aaKnown RBP9.51□□□□□ -0.89
USV1YPL230W ATH1P48016 1211 aa9.5□□□□□ -0.89
USV1YPL230W PML39Q03760 334 aa9.47□□□□□ -0.89
USV1YPL230W GUT1P32190 709 aa9.46□□□□□ -0.9
USV1YPL230W RAM2P29703 316 aa9.45□□□□□ -0.9
USV1YPL230W PTC3P34221 468 aaKnown RBP9.45□□□□□ -0.9
USV1YPL230W ELP4Q02884 456 aaKnown RBP9.42□□□□□ -0.9
USV1YPL230W EDS1P38073 919 aa9.41□□□□□ -0.9
USV1YPL230W COQ8P27697 501 aa9.37□□□□□ -0.91
USV1YPL230W VRP1P37370 817 aa9.37□□□□□ -0.91
USV1YPL230W YDR344CQ05510 147 aa9.33□□□□□ -0.92
USV1YPL230W XDJ1P39102 459 aa9.32□□□□□ -0.92
USV1YPL230W PEX29Q03370 554 aa9.32□□□□□ -0.92
USV1YPL230W MID1P41821 548 aa9.31□□□□□ -0.92
USV1YPL230W ARH1P48360 493 aa9.3□□□□□ -0.92
USV1YPL230W NST1P53935 1240 aa9.28□□□□□ -0.92
USV1YPL230W AI4P03878 556 aa9.26□□□□□ -0.93
USV1YPL230W MPH3P0CE00 602 aa9.25□□□□□ -0.93
USV1YPL230W SOL3P38858 249 aa9.25□□□□□ -0.93
USV1YPL230W SPT23P35210 1082 aa9.21□□□□□ -0.94
USV1YPL230W NOP53Q12080 455 aaKnown RBP9.21□□□□□ -0.94
USV1YPL230W HAP5Q02516 242 aa9.19□□□□□ -0.94
USV1YPL230W DPS1P04802 557 aaKnown RBP9.17□□□□□ -0.94
USV1YPL230W YGR273CP53329 174 aa9.16□□□□□ -0.94
USV1YPL230W ILV3P39522 585 aaKnown RBP9.14□□□□□ -0.95
USV1YPL230W BNI4P53858 892 aa9.12□□□□□ -0.95
USV1YPL230W PTC2P39966 464 aaKnown RBP9.11□□□□□ -0.95
USV1YPL230W MPC54Q08550 464 aa9.11□□□□□ -0.95
USV1YPL230W YML082WQ04533 649 aaKnown RBP9.06□□□□□ -0.96
USV1YPL230W NMA111P53920 997 aa9.05□□□□□ -0.96
USV1YPL230W SLI15P38283 698 aa9.04□□□□□ -0.96
USV1YPL230W DPL1Q05567 589 aa9.03□□□□□ -0.96
USV1YPL230W KEX1P09620 729 aa8.95□□□□□ -0.98
USV1YPL230W SET1P38827 1080 aaKnown RBP8.93□□□□□ -0.98
USV1YPL230W ISU2Q12056 156 aa8.92□□□□□ -0.98
USV1YPL230W SRC1Q03707 834 aa8.86□□□□□ -0.99
USV1YPL230W CDC73Q06697 393 aa8.86□□□□□ -0.99
USV1YPL230W VHR2P40041 505 aa8.85□□□□□ -0.99
USV1YPL230W GYP1Q08484 637 aa8.85□□□□□ -0.99
USV1YPL230W YLR326WQ06170 240 aaKnown RBP8.84□□□□□ -0.99
USV1YPL230W YPR015CQ12531 247 aa8.84□□□□□ -0.99
USV1YPL230W RPP1BP10622 106 aaKnown RBP8.83□□□□□ -1
USV1YPL230W UBP14P38237 781 aaKnown RBP8.82□□□□□ -1
USV1YPL230W RAM1P22007 431 aa8.81□□□□□ -1
USV1YPL230W RAD54P32863 898 aa8.81□□□□□ -1
USV1YPL230W RAS1P01119 309 aa8.79□□□□□ -1
USV1YPL230W PCS60P38137 543 aaKnown RBP RIP-Chip data8.78□□□□□ -1not detected
USV1YPL230W PDR1P12383 1068 aa8.76□□□□□ -1.01
USV1YPL230W SAS4Q04003 481 aa8.75□□□□□ -1.01
USV1YPL230W AMS1P22855 1083 aa8.73□□□□□ -1.01
USV1YPL230W KIC1P38692 1080 aa8.73□□□□□ -1.01
USV1YPL230W IFH1P39520 1085 aa8.72□□□□□ -1.01
USV1YPL230W PEX21P50091 288 aa8.69□□□□□ -1.02
USV1YPL230W TRK1P12685 1235 aa8.66□□□□□ -1.02
USV1YPL230W YEL077CQ3E7X8 1277 aa8.66□□□□□ -1.02
USV1YPL230W MRF1P30775 413 aaPredicted RBP8.64□□□□□ -1.03
USV1YPL230W YDR090CQ03193 310 aa8.63□□□□□ -1.03
USV1YPL230W YRR1Q12172 810 aa8.63□□□□□ -1.03
USV1YPL230W SDH2P21801 266 aa8.6□□□□□ -1.03
USV1YPL230W PRT1P06103 763 aaKnown RBP8.59□□□□□ -1.03
USV1YPL230W REF2P42073 533 aaPredicted RBP8.59□□□□□ -1.03
USV1YPL230W CSC1Q06538 782 aa8.59□□□□□ -1.03
USV1YPL230W BUD20Q08004 166 aaPredicted RBP8.58□□□□□ -1.04
USV1YPL230W TFB4Q12004 338 aa8.58□□□□□ -1.04
USV1YPL230W TUM1Q08686 304 aaKnown RBP8.57□□□□□ -1.04
USV1YPL230W NPL4P33755 580 aa8.55□□□□□ -1.04
USV1YPL230W RGA1P39083 1007 aa8.55□□□□□ -1.04
USV1YPL230W ERG12P07277 443 aa8.54□□□□□ -1.04
USV1YPL230W NUD1P32336 851 aa8.54□□□□□ -1.04
USV1YPL230W STR2P47164 639 aa8.54□□□□□ -1.04
USV1YPL230W GAP1P19145 602 aaPredicted RBP8.53□□□□□ -1.04
USV1YPL230W YPR148CQ06523 435 aa8.53□□□□□ -1.04
USV1YPL230W ISM1P48526 1002 aa8.51□□□□□ -1.05
USV1YPL230W RGA2Q06407 1009 aa8.49□□□□□ -1.05
USV1YPL230W VPS70P47161 811 aa8.48□□□□□ -1.05
USV1YPL230W ORC6P38826 435 aa8.47□□□□□ -1.05
USV1YPL230W MAK21Q12176 1025 aaKnown RBP8.47□□□□□ -1.05
USV1YPL230W GCD11P32481 527 aaKnown RBP8.46□□□□□ -1.06
USV1YPL230W SPT16P32558 1035 aaKnown RBP8.46□□□□□ -1.06
USV1YPL230W COX6P00427 148 aa8.44□□□□□ -1.06
USV1YPL230W MVP1P40959 511 aaKnown RBP8.41□□□□□ -1.06
USV1YPL230W CST6P40535 587 aa8.39□□□□□ -1.07
USV1YPL230W GCR2Q01722 534 aa8.39□□□□□ -1.07
USV1YPL230W PAT1P25644 796 aaKnown RBP8.38□□□□□ -1.07
USV1YPL230W BRE2P43132 505 aa8.38□□□□□ -1.07
USV1YPL230W TY1A-DR4O74302 440 aa8.37□□□□□ -1.07
USV1YPL230W TY1A-HP0C2I4 478 aaKnown RBP8.37□□□□□ -1.07
USV1YPL230W TY1A-AP0CX57 440 aa8.37□□□□□ -1.07
USV1YPL230W TY1A-PR1P0CX58 440 aa8.37□□□□□ -1.07
USV1YPL230W TY1A-ORP0CX59 440 aa8.37□□□□□ -1.07
USV1YPL230W TY1A-PR2P0CX60 440 aa8.37□□□□□ -1.07
USV1YPL230W TY1A-DR5P0CX65 440 aa8.37□□□□□ -1.07
USV1YPL230W TY1A-ER2P0CX66 440 aa8.37□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms