RNA–Protein interactions for RNA: YPL211W

NIP7, Transcript of Nucleolar protein required for 60S ribosome subunit biogenesis, yeastyeast

Gene NIP7, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP7YPL211W NOP53Q12080 455 aaKnown RBP7.71□□□□□ -1.18
NIP7YPL211W YEL023CP39992 682 aa7.69□□□□□ -1.18
NIP7YPL211W YNL035CP53962 389 aaKnown RBP7.68□□□□□ -1.18
NIP7YPL211W AIR2Q12476 344 aaKnown RBP7.68□□□□□ -1.18
NIP7YPL211W SOL3P38858 249 aa7.66□□□□□ -1.18
NIP7YPL211W PTC4P38089 393 aa7.64□□□□□ -1.19
NIP7YPL211W DAN4P47179 1161 aa7.64□□□□□ -1.19
NIP7YPL211W JIP4Q03361 876 aa7.64□□□□□ -1.19
NIP7YPL211W NCR1Q12200 1170 aa7.63□□□□□ -1.19
NIP7YPL211W RQC2Q12532 1038 aaKnown RBP7.63□□□□□ -1.19
NIP7YPL211W SEC61P32915 480 aa7.62□□□□□ -1.19
NIP7YPL211W NST1P53935 1240 aa7.62□□□□□ -1.19
NIP7YPL211W YJL171CP46992 396 aa7.6□□□□□ -1.19
NIP7YPL211W YGR273CP53329 174 aa7.6□□□□□ -1.19
NIP7YPL211W VPS70P47161 811 aa7.59□□□□□ -1.19
NIP7YPL211W IFH1P39520 1085 aa7.58□□□□□ -1.2
NIP7YPL211W TFG1P41895 735 aaPredicted RBP7.57□□□□□ -1.2
NIP7YPL211W YPR148CQ06523 435 aa7.57□□□□□ -1.2
NIP7YPL211W ILV3P39522 585 aaKnown RBP7.56□□□□□ -1.2
NIP7YPL211W MPH3P0CE00 602 aa7.54□□□□□ -1.2
NIP7YPL211W VHR2P40041 505 aa7.54□□□□□ -1.2
NIP7YPL211W PML39Q03760 334 aa7.54□□□□□ -1.2
NIP7YPL211W BMT6Q12291 365 aa7.54□□□□□ -1.2
NIP7YPL211W AI4P03878 556 aa7.53□□□□□ -1.2
NIP7YPL211W SAP30P38429 201 aa7.52□□□□□ -1.21
NIP7YPL211W MID1P41821 548 aa7.51□□□□□ -1.21
NIP7YPL211W YDL129WQ07555 291 aa7.51□□□□□ -1.21
NIP7YPL211W KEX1P09620 729 aa7.5□□□□□ -1.21
NIP7YPL211W UBP14P38237 781 aaKnown RBP7.5□□□□□ -1.21
NIP7YPL211W YLR326WQ06170 240 aaKnown RBP7.5□□□□□ -1.21
NIP7YPL211W SAS10Q12136 610 aaPredicted RBP7.5□□□□□ -1.21
NIP7YPL211W REF2P42073 533 aaPredicted RBP7.47□□□□□ -1.21
NIP7YPL211W SLI15P38283 698 aa7.45□□□□□ -1.22
NIP7YPL211W PCS60P38137 543 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
NIP7YPL211W YDR344CQ05510 147 aa7.44□□□□□ -1.22
NIP7YPL211W YDR090CQ03193 310 aa7.43□□□□□ -1.22
NIP7YPL211W RAD54P32863 898 aa7.42□□□□□ -1.22
NIP7YPL211W PEX29Q03370 554 aa7.42□□□□□ -1.22
NIP7YPL211W CKB1P43639 278 aa7.41□□□□□ -1.22
NIP7YPL211W KIC1P38692 1080 aa7.39□□□□□ -1.23
NIP7YPL211W PBS2P08018 668 aa7.38□□□□□ -1.23
NIP7YPL211W MPC54Q08550 464 aa7.38□□□□□ -1.23
NIP7YPL211W CDC73Q06697 393 aa7.37□□□□□ -1.23
NIP7YPL211W ELP4Q02884 456 aaKnown RBP7.36□□□□□ -1.23
NIP7YPL211W COX6P00427 148 aa7.34□□□□□ -1.23
NIP7YPL211W SPB4P25808 606 aaPredicted RBP7.34□□□□□ -1.23
NIP7YPL211W PRE3P38624 215 aa7.34□□□□□ -1.23
NIP7YPL211W ARH1P48360 493 aa7.33□□□□□ -1.24
NIP7YPL211W DPL1Q05567 589 aa7.33□□□□□ -1.24
NIP7YPL211W NMA111P53920 997 aa7.32□□□□□ -1.24
NIP7YPL211W MAK21Q12176 1025 aaKnown RBP7.32□□□□□ -1.24
NIP7YPL211W CHL1P22516 861 aaPredicted RBP7.31□□□□□ -1.24
NIP7YPL211W HAP5Q02516 242 aa7.3□□□□□ -1.24
NIP7YPL211W DSF2P38213 736 aa7.28□□□□□ -1.24
NIP7YPL211W MAM3Q12296 706 aa7.28□□□□□ -1.24
NIP7YPL211W ISU2Q12056 156 aa7.26□□□□□ -1.25
NIP7YPL211W RPP1BP10622 106 aaKnown RBP7.25□□□□□ -1.25
NIP7YPL211W ORC6P38826 435 aa7.25□□□□□ -1.25
NIP7YPL211W IES2P40154 320 aa7.25□□□□□ -1.25
NIP7YPL211W SPT23P35210 1082 aa7.23□□□□□ -1.25
NIP7YPL211W BNI4P53858 892 aa7.22□□□□□ -1.25
NIP7YPL211W GAP1P19145 602 aaPredicted RBP7.21□□□□□ -1.26
NIP7YPL211W PEX21P50091 288 aa7.21□□□□□ -1.26
NIP7YPL211W PDR1P12383 1068 aa7.2□□□□□ -1.26
NIP7YPL211W PTC2P39966 464 aaKnown RBP7.2□□□□□ -1.26
NIP7YPL211W NUP42P49686 430 aaKnown RBP7.19□□□□□ -1.26
NIP7YPL211W CSC1Q06538 782 aa7.19□□□□□ -1.26
NIP7YPL211W YRR1Q12172 810 aa7.19□□□□□ -1.26
NIP7YPL211W DIT2P21595 489 aa7.18□□□□□ -1.26
NIP7YPL211W VRP1P37370 817 aa7.18□□□□□ -1.26
NIP7YPL211W MVP1P40959 511 aaKnown RBP7.18□□□□□ -1.26
NIP7YPL211W TUM1Q08686 304 aaKnown RBP7.18□□□□□ -1.26
NIP7YPL211W BCK2P33306 851 aa7.17□□□□□ -1.26
NIP7YPL211W RGR1P19263 1082 aa7.16□□□□□ -1.26
NIP7YPL211W TFB4Q12004 338 aa7.16□□□□□ -1.26
NIP7YPL211W YPR015CQ12531 247 aa7.15□□□□□ -1.26
NIP7YPL211W RAM1P22007 431 aa7.14□□□□□ -1.27
NIP7YPL211W YPR109WQ06104 294 aa7.14□□□□□ -1.27
NIP7YPL211W YML082WQ04533 649 aaKnown RBP7.13□□□□□ -1.27
NIP7YPL211W PSE1P32337 1089 aaKnown RBP7.12□□□□□ -1.27
NIP7YPL211W NUD1P32336 851 aa7.08□□□□□ -1.28
NIP7YPL211W STR2P47164 639 aa7.07□□□□□ -1.28
NIP7YPL211W GLC3P32775 704 aa7.06□□□□□ -1.28
NIP7YPL211W ISM1P48526 1002 aa7.06□□□□□ -1.28
NIP7YPL211W XDJ1P39102 459 aa7.04□□□□□ -1.28
NIP7YPL211W TEA1P47988 759 aa7.04□□□□□ -1.28
NIP7YPL211W YNR021WP53723 404 aaKnown RBP7.04□□□□□ -1.28
NIP7YPL211W LEU3P08638 886 aa7.03□□□□□ -1.28
NIP7YPL211W NPL4P33755 580 aa7.03□□□□□ -1.28
NIP7YPL211W BUD20Q08004 166 aaPredicted RBP7.03□□□□□ -1.28
NIP7YPL211W ATF2P53296 535 aa7.02□□□□□ -1.29
NIP7YPL211W GYP1Q08484 637 aa7.02□□□□□ -1.29
NIP7YPL211W CLB5P30283 435 aa7.01□□□□□ -1.29
NIP7YPL211W GCD11P32481 527 aaKnown RBP7□□□□□ -1.29
NIP7YPL211W KEX2P13134 814 aa6.99□□□□□ -1.29
NIP7YPL211W ERF2Q06551 359 aa6.99□□□□□ -1.29
NIP7YPL211W TY1A-DR4O74302 440 aa6.98□□□□□ -1.29
NIP7YPL211W TY1A-HP0C2I4 478 aaKnown RBP6.98□□□□□ -1.29
NIP7YPL211W TY1A-AP0CX57 440 aa6.98□□□□□ -1.29
NIP7YPL211W TY1A-PR1P0CX58 440 aa6.98□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms