RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W HTA2P04912 132 aa8.59□□□□□ -1.03
MRPL40YPL173W DCW1P36091 449 aa8.57□□□□□ -1.04
MRPL40YPL173W PRE3P38624 215 aa8.56□□□□□ -1.04
MRPL40YPL173W PTC4P38089 393 aa8.55□□□□□ -1.04
MRPL40YPL173W YEL023CP39992 682 aa8.55□□□□□ -1.04
MRPL40YPL173W YDR344CQ05510 147 aa8.43□□□□□ -1.06
MRPL40YPL173W GRE2Q12068 342 aaKnown RBP8.41□□□□□ -1.06
MRPL40YPL173W XDJ1P39102 459 aa8.38□□□□□ -1.07
MRPL40YPL173W PML39Q03760 334 aa8.38□□□□□ -1.07
MRPL40YPL173W VRP1P37370 817 aa8.37□□□□□ -1.07
MRPL40YPL173W ELP4Q02884 456 aaKnown RBP8.34□□□□□ -1.07
MRPL40YPL173W MIF2P35201 549 aa8.31□□□□□ -1.08
MRPL40YPL173W EDS1P38073 919 aa8.31□□□□□ -1.08
MRPL40YPL173W MAK11P20484 414 aaKnown RBP8.3□□□□□ -1.08
MRPL40YPL173W GUT1P32190 709 aa8.3□□□□□ -1.08
MRPL40YPL173W ATH1P48016 1211 aa8.3□□□□□ -1.08
MRPL40YPL173W NST1P53935 1240 aa8.3□□□□□ -1.08
MRPL40YPL173W PTC3P34221 468 aaKnown RBP8.29□□□□□ -1.08
MRPL40YPL173W ARH1P48360 493 aa8.29□□□□□ -1.08
MRPL40YPL173W RAM2P29703 316 aa8.27□□□□□ -1.09
MRPL40YPL173W MID1P41821 548 aa8.25□□□□□ -1.09
MRPL40YPL173W DPS1P04802 557 aaKnown RBP8.23□□□□□ -1.09
MRPL40YPL173W SOL3P38858 249 aa8.23□□□□□ -1.09
MRPL40YPL173W AI4P03878 556 aa8.18□□□□□ -1.1
MRPL40YPL173W MPH3P0CE00 602 aa8.18□□□□□ -1.1
MRPL40YPL173W COQ8P27697 501 aa8.18□□□□□ -1.1
MRPL40YPL173W SPT23P35210 1082 aa8.18□□□□□ -1.1
MRPL40YPL173W ILV3P39522 585 aaKnown RBP8.15□□□□□ -1.1
MRPL40YPL173W PEX29Q03370 554 aa8.15□□□□□ -1.1
MRPL40YPL173W HAP5Q02516 242 aa8.13□□□□□ -1.11
MRPL40YPL173W BNI4P53858 892 aa8.1□□□□□ -1.11
MRPL40YPL173W SRC1Q03707 834 aa8.09□□□□□ -1.11
MRPL40YPL173W YML082WQ04533 649 aaKnown RBP8.07□□□□□ -1.12
MRPL40YPL173W MPC54Q08550 464 aa8.06□□□□□ -1.12
MRPL40YPL173W YGR273CP53329 174 aa8.05□□□□□ -1.12
MRPL40YPL173W PTC2P39966 464 aaKnown RBP8.03□□□□□ -1.12
MRPL40YPL173W NOP53Q12080 455 aaKnown RBP8.03□□□□□ -1.12
MRPL40YPL173W NMA111P53920 997 aa7.98□□□□□ -1.13
MRPL40YPL173W SLI15P38283 698 aa7.97□□□□□ -1.13
MRPL40YPL173W RGA2Q06407 1009 aa7.95□□□□□ -1.14
MRPL40YPL173W DPL1Q05567 589 aa7.94□□□□□ -1.14
MRPL40YPL173W YPR015CQ12531 247 aa7.92□□□□□ -1.14
MRPL40YPL173W RAS1P01119 309 aa7.89□□□□□ -1.15
MRPL40YPL173W RAM1P22007 431 aa7.88□□□□□ -1.15
MRPL40YPL173W RGA1P39083 1007 aa7.88□□□□□ -1.15
MRPL40YPL173W KEX1P09620 729 aa7.85□□□□□ -1.15
MRPL40YPL173W ISU2Q12056 156 aa7.84□□□□□ -1.15
MRPL40YPL173W CDC73Q06697 393 aa7.8□□□□□ -1.16
MRPL40YPL173W AMS1P22855 1083 aa7.78□□□□□ -1.16
MRPL40YPL173W GYP1Q08484 637 aa7.77□□□□□ -1.17
MRPL40YPL173W TRK1P12685 1235 aa7.75□□□□□ -1.17
MRPL40YPL173W PDR1P12383 1068 aa7.74□□□□□ -1.17
MRPL40YPL173W SDH2P21801 266 aa7.74□□□□□ -1.17
MRPL40YPL173W YLR326WQ06170 240 aaKnown RBP7.74□□□□□ -1.17
MRPL40YPL173W UBP14P38237 781 aaKnown RBP7.73□□□□□ -1.17
MRPL40YPL173W SAS4Q04003 481 aa7.71□□□□□ -1.18
MRPL40YPL173W PCS60P38137 543 aaKnown RBP RIP-Chip data7.68□□□□□ -1.18not detected
MRPL40YPL173W VHR2P40041 505 aa7.68□□□□□ -1.18
MRPL40YPL173W SET1P38827 1080 aaKnown RBP7.67□□□□□ -1.18
MRPL40YPL173W RAD54P32863 898 aa7.64□□□□□ -1.19
MRPL40YPL173W YEL077CQ3E7X8 1277 aa7.63□□□□□ -1.19
MRPL40YPL173W RPP1BP10622 106 aaKnown RBP7.61□□□□□ -1.19
MRPL40YPL173W BUD20Q08004 166 aaPredicted RBP7.59□□□□□ -1.19
MRPL40YPL173W MRF1P30775 413 aaPredicted RBP7.57□□□□□ -1.2
MRPL40YPL173W YDR090CQ03193 310 aa7.56□□□□□ -1.2
MRPL40YPL173W PRT1P06103 763 aaKnown RBP7.55□□□□□ -1.2
MRPL40YPL173W YRR1Q12172 810 aa7.55□□□□□ -1.2
MRPL40YPL173W STR2P47164 639 aa7.54□□□□□ -1.2
MRPL40YPL173W GAP1P19145 602 aaPredicted RBP7.53□□□□□ -1.2
MRPL40YPL173W YPL062WQ02781 134 aa7.52□□□□□ -1.21
MRPL40YPL173W ISM1P48526 1002 aa7.5□□□□□ -1.21
MRPL40YPL173W PEX21P50091 288 aa7.49□□□□□ -1.21
MRPL40YPL173W TFB4Q12004 338 aa7.48□□□□□ -1.21
MRPL40YPL173W ERG12P07277 443 aa7.47□□□□□ -1.21
MRPL40YPL173W NUD1P32336 851 aa7.47□□□□□ -1.21
MRPL40YPL173W KIC1P38692 1080 aa7.47□□□□□ -1.21
MRPL40YPL173W CSC1Q06538 782 aa7.47□□□□□ -1.21
MRPL40YPL173W AIR1P40507 360 aaKnown RBP7.46□□□□□ -1.22
MRPL40YPL173W CST6P40535 587 aa7.46□□□□□ -1.22
MRPL40YPL173W BRE2P43132 505 aa7.46□□□□□ -1.22
MRPL40YPL173W TUM1Q08686 304 aaKnown RBP7.45□□□□□ -1.22
MRPL40YPL173W CLA4P48562 842 aa7.44□□□□□ -1.22
MRPL40YPL173W IFH1P39520 1085 aa7.43□□□□□ -1.22
MRPL40YPL173W TY1A-DR4O74302 440 aa7.41□□□□□ -1.22
MRPL40YPL173W TY1A-HP0C2I4 478 aaKnown RBP7.41□□□□□ -1.22
MRPL40YPL173W TY1A-AP0CX57 440 aa7.41□□□□□ -1.22
MRPL40YPL173W TY1A-PR1P0CX58 440 aa7.41□□□□□ -1.22
MRPL40YPL173W TY1A-ORP0CX59 440 aa7.41□□□□□ -1.22
MRPL40YPL173W TY1A-PR2P0CX60 440 aa7.41□□□□□ -1.22
MRPL40YPL173W TY1A-DR5P0CX65 440 aa7.41□□□□□ -1.22
MRPL40YPL173W TY1A-ER2P0CX66 440 aa7.41□□□□□ -1.22
MRPL40YPL173W TY1A-GR3P0CX67 440 aa7.41□□□□□ -1.22
MRPL40YPL173W TY1A-LR1P0CX68 440 aa7.41□□□□□ -1.22
MRPL40YPL173W TY1A-MR2P0CX69 440 aa7.41□□□□□ -1.22
MRPL40YPL173W ORC6P38826 435 aa7.41□□□□□ -1.22
MRPL40YPL173W TY1A-JR2P47099 440 aa7.41□□□□□ -1.22
MRPL40YPL173W TY1A-DR1Q03856 440 aa7.41□□□□□ -1.22
MRPL40YPL173W TY1A-ML1Q04706 440 aaKnown RBP7.41□□□□□ -1.22
MRPL40YPL173W LAM6Q08001 693 aa7.41□□□□□ -1.22
MRPL40YPL173W TY1A-BRQ12217 440 aa7.41□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 144.2 ms