RNA–Protein interactions for RNA: YPL119C

DBP1, Transcript of Putative ATP-dependent RNA helicase of the DEAD-box protein family, yeast

Gene DBP1, Length 1,854 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP1	YPL119C	TY1B-BL	Q12490	1755 aa		13.92	□□□□□ -0.18
DBP1	YPL119C	IKI3	Q06706	1349 aa	Known RBP	13.9	□□□□□ -0.18
DBP1	YPL119C	GEA1	P47102	1408 aa	Predicted RBP	13.9	□□□□□ -0.18
DBP1	YPL119C	DNF1	P32660	1571 aa		13.85	□□□□□ -0.19
DBP1	YPL119C	RPA190	P10964	1664 aa	Known RBP	13.83	□□□□□ -0.2
DBP1	YPL119C	SNT2	P53127	1403 aa		13.82	□□□□□ -0.2
DBP1	YPL119C	RTT106	P40161	455 aa		13.8	□□□□□ -0.2
DBP1	YPL119C	NTE1	Q04958	1679 aa		13.77	□□□□□ -0.2
DBP1	YPL119C	SSM4	P40318	1319 aa		13.74	□□□□□ -0.21
DBP1	YPL119C	RPO21	P04050	1733 aa	Known RBP	13.74	□□□□□ -0.21
DBP1	YPL119C	TY3B-G	Q99315	1547 aa		13.72	□□□□□ -0.21
DBP1	YPL119C	NUP170	P38181	1502 aa		13.71	□□□□□ -0.21
DBP1	YPL119C	GEA2	P39993	1459 aa	Known RBP	13.7	□□□□□ -0.22
DBP1	YPL119C	NUP159	P40477	1460 aa		13.67	□□□□□ -0.22
DBP1	YPL119C	YBT1	P32386	1661 aa		13.65	□□□□□ -0.22
DBP1	YPL119C	VPS15	P22219	1454 aa		13.64	□□□□□ -0.23
DBP1	YPL119C	IRC20	Q06554	1556 aa		13.64	□□□□□ -0.23
DBP1	YPL119C	CAT8	P39113	1433 aa		13.57	□□□□□ -0.24
DBP1	YPL119C	YRF1-1	P0CX20	1796 aa		13.57	□□□□□ -0.24
DBP1	YPL119C	YRF1-5	P0CX21	1796 aa		13.57	□□□□□ -0.24
DBP1	YPL119C	YRF1-8	P0CX22	1796 aa		13.57	□□□□□ -0.24
DBP1	YPL119C	MET10	P39692	1035 aa		13.56	□□□□□ -0.24
DBP1	YPL119C	CKB1	P43639	278 aa		13.53	□□□□□ -0.24
DBP1	YPL119C	GDB1	Q06625	1536 aa		13.52	□□□□□ -0.25
DBP1	YPL119C	SPO14	P36126	1683 aa		13.51	□□□□□ -0.25
DBP1	YPL119C	MET5	P47169	1442 aa		13.51	□□□□□ -0.25
DBP1	YPL119C	PDR10	P51533	1564 aa		13.49	□□□□□ -0.25
DBP1	YPL119C	NUP157	P40064	1391 aa	Known RBP	13.47	□□□□□ -0.25
DBP1	YPL119C	PDR12	Q02785	1511 aa		13.47	□□□□□ -0.25
DBP1	YPL119C	ARO1	P08566	1588 aa	Known RBP	13.46	□□□□□ -0.25
DBP1	YPL119C	SRB8	P25648	1427 aa		13.45	□□□□□ -0.26
DBP1	YPL119C	BUD3	P25558	1636 aa		13.42	□□□□□ -0.26
DBP1	YPL119C	BUD21	Q08492	214 aa	Predicted RBP	13.34	□□□□□ -0.27
DBP1	YPL119C	YSP2	Q06681	1438 aa		13.3	□□□□□ -0.28
DBP1	YPL119C	IQG1	Q12280	1495 aa		13.28	□□□□□ -0.28
DBP1	YPL119C	GCN2	P15442	1659 aa		13.26	□□□□□ -0.29
DBP1	YPL119C	MMS1	Q06211	1407 aa		13.24	□□□□□ -0.29
DBP1	YPL119C	SEC7	P11075	2009 aa	Known RBP	13.2	□□□□□ -0.3
DBP1	YPL119C	BNR1	P40450	1375 aa		13.2	□□□□□ -0.3
DBP1	YPL119C	LTE1	P07866	1435 aa		13.18	□□□□□ -0.3
DBP1	YPL119C	POL5	P39985	1022 aa	Known RBP	13.16	□□□□□ -0.3
DBP1	YPL119C	NOP7	P53261	605 aa	Known RBP	13.15	□□□□□ -0.3
DBP1	YPL119C	DRS2	P39524	1355 aa		13.1	□□□□□ -0.31
DBP1	YPL119C	PAF1	P38351	445 aa		13.09	□□□□□ -0.31
DBP1	YPL119C	DOP1	Q03921	1698 aa		13.07	□□□□□ -0.32
DBP1	YPL119C	YOR093C	Q12275	1648 aa		13.05	□□□□□ -0.32
DBP1	YPL119C	CHC1	P22137	1653 aa	Known RBP	13.04	□□□□□ -0.32
DBP1	YPL119C	BFR2	Q06631	534 aa	Known RBP	13.03	□□□□□ -0.32
DBP1	YPL119C	ITT1	Q04638	464 aa		13.02	□□□□□ -0.32
DBP1	YPL119C	TRM3	Q07527	1436 aa		13.01	□□□□□ -0.33
DBP1	YPL119C	PDR5	P33302	1511 aa	Known RBP	12.99	□□□□□ -0.33
DBP1	YPL119C	ORC1	P54784	914 aa	Predicted RBP	12.99	□□□□□ -0.33
DBP1	YPL119C	BNI1	P41832	1953 aa		12.96	□□□□□ -0.33
DBP1	YPL119C	VMR1	P38735	1592 aa		12.95	□□□□□ -0.34
DBP1	YPL119C	PDR11	P40550	1411 aa		12.94	□□□□□ -0.34
DBP1	YPL119C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	12.92	□□□□□ -0.34	not detected
DBP1	YPL119C	NUP188	P52593	1655 aa	Known RBP	12.92	□□□□□ -0.34
DBP1	YPL119C	RAV1	P47104	1357 aa		12.89	□□□□□ -0.35
DBP1	YPL119C	IML1	P47170	1584 aa		12.89	□□□□□ -0.35
DBP1	YPL119C	TAF5	P38129	798 aa		12.87	□□□□□ -0.35
DBP1	YPL119C	RTC1	Q08281	1341 aa		12.86	□□□□□ -0.35
DBP1	YPL119C	SPT7	P35177	1332 aa		12.86	□□□□□ -0.35
DBP1	YPL119C	DNF2	Q12675	1612 aa		12.83	□□□□□ -0.36
DBP1	YPL119C	TYS1	P36421	394 aa	Known RBP	12.82	□□□□□ -0.36
DBP1	YPL119C	SEC3	P33332	1336 aa	Known RBP	12.81	□□□□□ -0.36
DBP1	YPL119C	IPL1	P38991	367 aa		12.8	□□□□□ -0.36
DBP1	YPL119C	URN1	Q06525	465 aa	Known RBP	12.79	□□□□□ -0.36
DBP1	YPL119C	ESL2	P36168	1195 aa		12.78	□□□□□ -0.36
DBP1	YPL119C	ENP1	P38333	483 aa	Known RBP	12.77	□□□□□ -0.37
DBP1	YPL119C	LEU3	P08638	886 aa		12.76	□□□□□ -0.37
DBP1	YPL119C	KIP3	P53086	805 aa	Known RBP	12.76	□□□□□ -0.37
DBP1	YPL119C	MHP1	P43638	1398 aa		12.76	□□□□□ -0.37
DBP1	YPL119C	TY3B-I	Q7LHG5	1498 aa	Known RBP	12.76	□□□□□ -0.37
DBP1	YPL119C	NUP192	P47054	1683 aa		12.75	□□□□□ -0.37
DBP1	YPL119C	YAP3	P38749	330 aa		12.72	□□□□□ -0.37
DBP1	YPL119C	PSD2	P53037	1138 aa	Known RBP	12.71	□□□□□ -0.37
DBP1	YPL119C	YLR419W	Q06698	1435 aa	Known RBP	12.68	□□□□□ -0.38
DBP1	YPL119C	PDS5	Q04264	1277 aa		12.67	□□□□□ -0.38
DBP1	YPL119C	SPE2	P21182	396 aa		12.64	□□□□□ -0.39
DBP1	YPL119C	RAD9	P14737	1309 aa		12.64	□□□□□ -0.39
DBP1	YPL119C	ALD4	P46367	519 aa	Known RBP	12.62	□□□□□ -0.39
DBP1	YPL119C	TAF8	Q03750	510 aa		12.62	□□□□□ -0.39
DBP1	YPL119C	CAB1	Q04430	367 aa		12.59	□□□□□ -0.39
DBP1	YPL119C	BCK1	Q01389	1478 aa		12.56	□□□□□ -0.4
DBP1	YPL119C	SCT1	P32784	759 aa		12.55	□□□□□ -0.4
DBP1	YPL119C	NST1	P53935	1240 aa		12.55	□□□□□ -0.4
DBP1	YPL119C	CHZ1	P40019	153 aa	Predicted RBP	12.54	□□□□□ -0.4
DBP1	YPL119C	DNF3	Q12674	1656 aa		12.54	□□□□□ -0.4
DBP1	YPL119C	NAP1	P25293	417 aa	Known RBP	12.52	□□□□□ -0.41
DBP1	YPL119C	MRX12	P47084	519 aa		12.51	□□□□□ -0.41
DBP1	YPL119C	MLP1	Q02455	1875 aa	Known RBP	12.51	□□□□□ -0.41
DBP1	YPL119C	ABP1	P15891	592 aa	Known RBP	12.5	□□□□□ -0.41
DBP1	YPL119C	RTG3	P38165	486 aa		12.5	□□□□□ -0.41
DBP1	YPL119C	NOP2	P40991	618 aa	Known RBP	12.5	□□□□□ -0.41
DBP1	YPL119C	KRE5	P22023	1365 aa		12.5	□□□□□ -0.41
DBP1	YPL119C	PRS1	P32895	427 aa	Known RBP	12.48	□□□□□ -0.41
DBP1	YPL119C	HAP1	P0CE41	1502 aa		12.46	□□□□□ -0.41
DBP1	YPL119C	RIA1	P53893	1110 aa		12.46	□□□□□ -0.42
DBP1	YPL119C	MAK10	Q02197	733 aa		12.44	□□□□□ -0.42
DBP1	YPL119C	FKH1	P40466	484 aa		12.42	□□□□□ -0.42

Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms