RNA–Protein interactions for RNA: YPL027W

SMA1, Transcript of Protein of unknown function involved in prospore membrane assembly, yeastyeast

Gene SMA1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMA1YPL027W LDB19Q12502 818 aa9.32□□□□□ -0.92
SMA1YPL027W YEL023CP39992 682 aa9.25□□□□□ -0.93
SMA1YPL027W RTG1P32607 177 aa9.23□□□□□ -0.93
SMA1YPL027W VPS70P47161 811 aa9.23□□□□□ -0.93
SMA1YPL027W YNL035CP53962 389 aaKnown RBP9.23□□□□□ -0.93
SMA1YPL027W JIP4Q03361 876 aa9.23□□□□□ -0.93
SMA1YPL027W YPR148CQ06523 435 aa9.22□□□□□ -0.93
SMA1YPL027W PTC4P38089 393 aa9.21□□□□□ -0.94
SMA1YPL027W FKH1P40466 484 aa9.2□□□□□ -0.94
SMA1YPL027W YGR273CP53329 174 aa9.18□□□□□ -0.94
SMA1YPL027W SAS10Q12136 610 aaPredicted RBP9.18□□□□□ -0.94
SMA1YPL027W SEC61P32915 480 aa9.17□□□□□ -0.94
SMA1YPL027W SOL3P38858 249 aa9.17□□□□□ -0.94
SMA1YPL027W TFG1P41895 735 aaPredicted RBP9.17□□□□□ -0.94
SMA1YPL027W NCR1Q12200 1170 aa9.16□□□□□ -0.94
SMA1YPL027W DAN4P47179 1161 aa9.15□□□□□ -0.94
SMA1YPL027W AIR2Q12476 344 aaKnown RBP9.15□□□□□ -0.94
SMA1YPL027W NST1P53935 1240 aa9.13□□□□□ -0.95
SMA1YPL027W YJL171CP46992 396 aa9.12□□□□□ -0.95
SMA1YPL027W MPH3P0CE00 602 aa9.11□□□□□ -0.95
SMA1YPL027W CKB1P43639 278 aa9.11□□□□□ -0.95
SMA1YPL027W AI4P03878 556 aa9.1□□□□□ -0.95
SMA1YPL027W VHR2P40041 505 aa9.1□□□□□ -0.95
SMA1YPL027W REF2P42073 533 aaPredicted RBP9.1□□□□□ -0.95
SMA1YPL027W KEX1P09620 729 aa9.06□□□□□ -0.96
SMA1YPL027W PML39Q03760 334 aa9.06□□□□□ -0.96
SMA1YPL027W UBP14P38237 781 aaKnown RBP9.04□□□□□ -0.96
SMA1YPL027W ILV3P39522 585 aaKnown RBP9.04□□□□□ -0.96
SMA1YPL027W YLR326WQ06170 240 aaKnown RBP9.04□□□□□ -0.96
SMA1YPL027W YDL129WQ07555 291 aa9.04□□□□□ -0.96
SMA1YPL027W BMT6Q12291 365 aa9.04□□□□□ -0.96
SMA1YPL027W RAD54P32863 898 aa9.01□□□□□ -0.97
SMA1YPL027W SAP30P38429 201 aa9.01□□□□□ -0.97
SMA1YPL027W SPB4P25808 606 aaPredicted RBP9□□□□□ -0.97
SMA1YPL027W KIC1P38692 1080 aa9□□□□□ -0.97
SMA1YPL027W PBS2P08018 668 aa8.99□□□□□ -0.97
SMA1YPL027W MID1P41821 548 aa8.98□□□□□ -0.97
SMA1YPL027W PCS60P38137 543 aaKnown RBP RIP-Chip data8.97□□□□□ -0.97not detected
SMA1YPL027W PEX29Q03370 554 aa8.97□□□□□ -0.97
SMA1YPL027W SLI15P38283 698 aa8.96□□□□□ -0.98
SMA1YPL027W YDR090CQ03193 310 aa8.96□□□□□ -0.98
SMA1YPL027W MAK21Q12176 1025 aaKnown RBP8.96□□□□□ -0.98
SMA1YPL027W COX6P00427 148 aa8.93□□□□□ -0.98
SMA1YPL027W RPP1BP10622 106 aaKnown RBP8.89□□□□□ -0.99
SMA1YPL027W DSF2P38213 736 aa8.89□□□□□ -0.99
SMA1YPL027W TAF7Q05021 590 aa8.89□□□□□ -0.99
SMA1YPL027W MAM3Q12296 706 aa8.89□□□□□ -0.99
SMA1YPL027W MPC54Q08550 464 aa8.87□□□□□ -0.99
SMA1YPL027W ELP4Q02884 456 aaKnown RBP8.86□□□□□ -0.99
SMA1YPL027W DPL1Q05567 589 aa8.86□□□□□ -0.99
SMA1YPL027W CDC73Q06697 393 aa8.85□□□□□ -0.99
SMA1YPL027W IES2P40154 320 aa8.82□□□□□ -1
SMA1YPL027W ARH1P48360 493 aa8.82□□□□□ -1
SMA1YPL027W NMA111P53920 997 aa8.82□□□□□ -1
SMA1YPL027W PRE3P38624 215 aa8.81□□□□□ -1
SMA1YPL027W YDR344CQ05510 147 aa8.81□□□□□ -1
SMA1YPL027W CHL1P22516 861 aaPredicted RBP8.8□□□□□ -1
SMA1YPL027W HAP5Q02516 242 aa8.8□□□□□ -1
SMA1YPL027W PEX21P50091 288 aa8.78□□□□□ -1
SMA1YPL027W ORC6P38826 435 aa8.77□□□□□ -1.01
SMA1YPL027W ISU2Q12056 156 aa8.77□□□□□ -1.01
SMA1YPL027W CSC1Q06538 782 aa8.75□□□□□ -1.01
SMA1YPL027W SPT23P35210 1082 aa8.73□□□□□ -1.01
SMA1YPL027W NUP42P49686 430 aaKnown RBP8.72□□□□□ -1.01
SMA1YPL027W LEU3P08638 886 aa8.71□□□□□ -1.02
SMA1YPL027W DIT2P21595 489 aa8.71□□□□□ -1.02
SMA1YPL027W BNI4P53858 892 aa8.71□□□□□ -1.02
SMA1YPL027W TFB4Q12004 338 aa8.71□□□□□ -1.02
SMA1YPL027W GAP1P19145 602 aaPredicted RBP8.7□□□□□ -1.02
SMA1YPL027W PSE1P32337 1089 aaKnown RBP8.7□□□□□ -1.02
SMA1YPL027W MVP1P40959 511 aaKnown RBP8.69□□□□□ -1.02
SMA1YPL027W PTC2P39966 464 aaKnown RBP8.68□□□□□ -1.02
SMA1YPL027W TUM1Q08686 304 aaKnown RBP8.68□□□□□ -1.02
SMA1YPL027W RGR1P19263 1082 aa8.67□□□□□ -1.02
SMA1YPL027W YRR1Q12172 810 aa8.67□□□□□ -1.02
SMA1YPL027W YNR021WP53723 404 aaKnown RBP8.64□□□□□ -1.03
SMA1YPL027W YPR109WQ06104 294 aa8.64□□□□□ -1.03
SMA1YPL027W PDR1P12383 1068 aa8.63□□□□□ -1.03
SMA1YPL027W BCK2P33306 851 aa8.61□□□□□ -1.03
SMA1YPL027W VRP1P37370 817 aa8.61□□□□□ -1.03
SMA1YPL027W ATF2P53296 535 aa8.61□□□□□ -1.03
SMA1YPL027W GLC3P32775 704 aa8.6□□□□□ -1.03
SMA1YPL027W YML082WQ04533 649 aaKnown RBP8.6□□□□□ -1.03
SMA1YPL027W CLB5P30283 435 aa8.59□□□□□ -1.03
SMA1YPL027W TEA1P47988 759 aa8.58□□□□□ -1.04
SMA1YPL027W NUD1P32336 851 aa8.56□□□□□ -1.04
SMA1YPL027W NPL4P33755 580 aa8.56□□□□□ -1.04
SMA1YPL027W RPN1P38764 993 aaKnown RBP8.55□□□□□ -1.04
SMA1YPL027W RAM1P22007 431 aa8.54□□□□□ -1.04
SMA1YPL027W YPR015CQ12531 247 aa8.53□□□□□ -1.04
SMA1YPL027W AIM7Q12156 149 aa8.51□□□□□ -1.05
SMA1YPL027W STR2P47164 639 aa8.49□□□□□ -1.05
SMA1YPL027W ISM1P48526 1002 aa8.49□□□□□ -1.05
SMA1YPL027W GYP1Q08484 637 aa8.49□□□□□ -1.05
SMA1YPL027W GCD11P32481 527 aaKnown RBP8.47□□□□□ -1.05
SMA1YPL027W BUD20Q08004 166 aaPredicted RBP8.47□□□□□ -1.05
SMA1YPL027W NIS1P53939 407 aa8.46□□□□□ -1.06
SMA1YPL027W YMR196WQ04336 1088 aa8.46□□□□□ -1.06
SMA1YPL027W XDJ1P39102 459 aa8.45□□□□□ -1.06
SMA1YPL027W PRT1P06103 763 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms