RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeastyeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUD3YOR216C PTC4P38089 393 aa9.1□□□□□ -0.95
RUD3YOR216C BCK2P33306 851 aa9.09□□□□□ -0.95
RUD3YOR216C PRE3P38624 215 aa9.07□□□□□ -0.96
RUD3YOR216C YEL023CP39992 682 aa9.07□□□□□ -0.96
RUD3YOR216C DCW1P36091 449 aa9.05□□□□□ -0.96
RUD3YOR216C GRE2Q12068 342 aaKnown RBP8.95□□□□□ -0.98
RUD3YOR216C MAK11P20484 414 aaKnown RBP8.89□□□□□ -0.99
RUD3YOR216C XDJ1P39102 459 aa8.89□□□□□ -0.99
RUD3YOR216C GUT1P32190 709 aa8.88□□□□□ -0.99
RUD3YOR216C PML39Q03760 334 aa8.88□□□□□ -0.99
RUD3YOR216C RAM2P29703 316 aa8.86□□□□□ -0.99
RUD3YOR216C NST1P53935 1240 aa8.86□□□□□ -0.99
RUD3YOR216C YDR344CQ05510 147 aa8.86□□□□□ -0.99
RUD3YOR216C PTC3P34221 468 aaKnown RBP8.84□□□□□ -0.99
RUD3YOR216C MIF2P35201 549 aa8.84□□□□□ -0.99
RUD3YOR216C EDS1P38073 919 aa8.84□□□□□ -0.99
RUD3YOR216C VRP1P37370 817 aa8.83□□□□□ -1
RUD3YOR216C ATH1P48016 1211 aa8.83□□□□□ -1
RUD3YOR216C ARH1P48360 493 aa8.82□□□□□ -1
RUD3YOR216C ELP4Q02884 456 aaKnown RBP8.81□□□□□ -1
RUD3YOR216C SOL3P38858 249 aa8.76□□□□□ -1.01
RUD3YOR216C AI4P03878 556 aa8.75□□□□□ -1.01
RUD3YOR216C MPH3P0CE00 602 aa8.74□□□□□ -1.01
RUD3YOR216C COQ8P27697 501 aa8.74□□□□□ -1.01
RUD3YOR216C MID1P41821 548 aa8.73□□□□□ -1.01
RUD3YOR216C SPT23P35210 1082 aa8.7□□□□□ -1.02
RUD3YOR216C NOP53Q12080 455 aaKnown RBP8.7□□□□□ -1.02
RUD3YOR216C DPS1P04802 557 aaKnown RBP8.67□□□□□ -1.02
RUD3YOR216C ILV3P39522 585 aaKnown RBP8.65□□□□□ -1.02
RUD3YOR216C HAP5Q02516 242 aa8.64□□□□□ -1.03
RUD3YOR216C BNI4P53858 892 aa8.64□□□□□ -1.03
RUD3YOR216C PEX29Q03370 554 aa8.64□□□□□ -1.03
RUD3YOR216C YML082WQ04533 649 aaKnown RBP8.62□□□□□ -1.03
RUD3YOR216C YGR273CP53329 174 aa8.6□□□□□ -1.03
RUD3YOR216C MPC54Q08550 464 aa8.57□□□□□ -1.04
RUD3YOR216C PTC2P39966 464 aaKnown RBP8.54□□□□□ -1.04
RUD3YOR216C SRC1Q03707 834 aa8.53□□□□□ -1.04
RUD3YOR216C NMA111P53920 997 aa8.49□□□□□ -1.05
RUD3YOR216C SLI15P38283 698 aa8.48□□□□□ -1.05
RUD3YOR216C DPL1Q05567 589 aa8.46□□□□□ -1.05
RUD3YOR216C RAM1P22007 431 aa8.39□□□□□ -1.07
RUD3YOR216C ISU2Q12056 156 aa8.38□□□□□ -1.07
RUD3YOR216C YPR015CQ12531 247 aa8.38□□□□□ -1.07
RUD3YOR216C KEX1P09620 729 aa8.38□□□□□ -1.07
RUD3YOR216C RGA2Q06407 1009 aa8.38□□□□□ -1.07
RUD3YOR216C RAS1P01119 309 aa8.32□□□□□ -1.08
RUD3YOR216C RGA1P39083 1007 aa8.32□□□□□ -1.08
RUD3YOR216C SET1P38827 1080 aaKnown RBP8.31□□□□□ -1.08
RUD3YOR216C UBP14P38237 781 aaKnown RBP8.28□□□□□ -1.08
RUD3YOR216C YLR326WQ06170 240 aaKnown RBP8.28□□□□□ -1.08
RUD3YOR216C CDC73Q06697 393 aa8.28□□□□□ -1.08
RUD3YOR216C AMS1P22855 1083 aa8.26□□□□□ -1.09
RUD3YOR216C SAS4Q04003 481 aa8.26□□□□□ -1.09
RUD3YOR216C VHR2P40041 505 aa8.25□□□□□ -1.09
RUD3YOR216C GYP1Q08484 637 aa8.23□□□□□ -1.09
RUD3YOR216C SDH2P21801 266 aa8.21□□□□□ -1.09
RUD3YOR216C PCS60P38137 543 aaKnown RBP RIP-Chip data8.21□□□□□ -1.09 RIP-Chip
RUD3YOR216C PDR1P12383 1068 aa8.2□□□□□ -1.1
RUD3YOR216C TRK1P12685 1235 aa8.2□□□□□ -1.1
RUD3YOR216C RPP1BP10622 106 aaKnown RBP8.18□□□□□ -1.1
RUD3YOR216C RAD54P32863 898 aa8.17□□□□□ -1.1
RUD3YOR216C YEL077CQ3E7X8 1277 aa8.13□□□□□ -1.11
RUD3YOR216C YDR090CQ03193 310 aa8.11□□□□□ -1.11
RUD3YOR216C GAP1P19145 602 aaPredicted RBP8.1□□□□□ -1.11
RUD3YOR216C MRF1P30775 413 aaPredicted RBP8.1□□□□□ -1.11
RUD3YOR216C BUD20Q08004 166 aaPredicted RBP8.08□□□□□ -1.12
RUD3YOR216C IFH1P39520 1085 aa8.06□□□□□ -1.12
RUD3YOR216C PRT1P06103 763 aaKnown RBP8.06□□□□□ -1.12
RUD3YOR216C TFB4Q12004 338 aa8.05□□□□□ -1.12
RUD3YOR216C CSC1Q06538 782 aa8.04□□□□□ -1.12
RUD3YOR216C KIC1P38692 1080 aa8.03□□□□□ -1.12
RUD3YOR216C YRR1Q12172 810 aa8.03□□□□□ -1.12
RUD3YOR216C STR2P47164 639 aa8.02□□□□□ -1.13
RUD3YOR216C PEX21P50091 288 aa8□□□□□ -1.13
RUD3YOR216C YPR148CQ06523 435 aa8□□□□□ -1.13
RUD3YOR216C REF2P42073 533 aaPredicted RBP7.99□□□□□ -1.13
RUD3YOR216C ISM1P48526 1002 aa7.99□□□□□ -1.13
RUD3YOR216C YPL062WQ02781 134 aa7.97□□□□□ -1.13
RUD3YOR216C NUD1P32336 851 aa7.96□□□□□ -1.13
RUD3YOR216C ERG12P07277 443 aa7.95□□□□□ -1.14
RUD3YOR216C ORC6P38826 435 aa7.94□□□□□ -1.14
RUD3YOR216C TUM1Q08686 304 aaKnown RBP7.94□□□□□ -1.14
RUD3YOR216C CST6P40535 587 aa7.92□□□□□ -1.14
RUD3YOR216C BRE2P43132 505 aa7.92□□□□□ -1.14
RUD3YOR216C TY1A-DR4O74302 440 aa7.9□□□□□ -1.14
RUD3YOR216C TY1A-HP0C2I4 478 aaKnown RBP7.9□□□□□ -1.14
RUD3YOR216C TY1A-AP0CX57 440 aa7.9□□□□□ -1.14
RUD3YOR216C TY1A-PR1P0CX58 440 aa7.9□□□□□ -1.14
RUD3YOR216C TY1A-ORP0CX59 440 aa7.9□□□□□ -1.14
RUD3YOR216C TY1A-PR2P0CX60 440 aa7.9□□□□□ -1.14
RUD3YOR216C TY1A-DR5P0CX65 440 aa7.9□□□□□ -1.14
RUD3YOR216C TY1A-ER2P0CX66 440 aa7.9□□□□□ -1.14
RUD3YOR216C TY1A-GR3P0CX67 440 aa7.9□□□□□ -1.14
RUD3YOR216C TY1A-LR1P0CX68 440 aa7.9□□□□□ -1.14
RUD3YOR216C TY1A-MR2P0CX69 440 aa7.9□□□□□ -1.14
RUD3YOR216C TY1A-JR2P47099 440 aa7.9□□□□□ -1.14
RUD3YOR216C TY1A-DR1Q03856 440 aa7.9□□□□□ -1.14
RUD3YOR216C TY1A-ML1Q04706 440 aaKnown RBP7.9□□□□□ -1.14
RUD3YOR216C LAM6Q08001 693 aa7.9□□□□□ -1.14
RUD3YOR216C TY1A-BRQ12217 440 aa7.9□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms