RNA–Protein interactions for RNA: YOR166C

SWT1, Transcript of RNA endoribonuclease involved in perinuclear mRNP quality control, yeastyeast

Gene SWT1, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT1YOR166C PTC4P38089 393 aa7.12□□□□□ -1.27
SWT1YOR166C YEL023CP39992 682 aa7.12□□□□□ -1.27
SWT1YOR166C CHL1P22516 861 aaPredicted RBP7.07□□□□□ -1.28
SWT1YOR166C RAM2P29703 316 aa7.07□□□□□ -1.28
SWT1YOR166C MAK11P20484 414 aaKnown RBP7.06□□□□□ -1.28
SWT1YOR166C PRE3P38624 215 aa7.06□□□□□ -1.28
SWT1YOR166C EDS1P38073 919 aa7.05□□□□□ -1.28
SWT1YOR166C GRE2Q12068 342 aaKnown RBP7.05□□□□□ -1.28
SWT1YOR166C BCK2P33306 851 aa7.04□□□□□ -1.28
SWT1YOR166C NST1P53935 1240 aa7.03□□□□□ -1.28
SWT1YOR166C YDR344CQ05510 147 aa7.02□□□□□ -1.29
SWT1YOR166C PTC3P34221 468 aaKnown RBP7.01□□□□□ -1.29
SWT1YOR166C GUT1P32190 709 aa7□□□□□ -1.29
SWT1YOR166C MIF2P35201 549 aa6.99□□□□□ -1.29
SWT1YOR166C PML39Q03760 334 aa6.98□□□□□ -1.29
SWT1YOR166C SOL3P38858 249 aa6.96□□□□□ -1.29
SWT1YOR166C ATH1P48016 1211 aa6.96□□□□□ -1.29
SWT1YOR166C COQ8P27697 501 aa6.95□□□□□ -1.3
SWT1YOR166C XDJ1P39102 459 aa6.9□□□□□ -1.31
SWT1YOR166C MID1P41821 548 aa6.9□□□□□ -1.31
SWT1YOR166C ARH1P48360 493 aa6.9□□□□□ -1.31
SWT1YOR166C MPH3P0CE00 602 aa6.89□□□□□ -1.31
SWT1YOR166C AI4P03878 556 aa6.88□□□□□ -1.31
SWT1YOR166C VRP1P37370 817 aa6.88□□□□□ -1.31
SWT1YOR166C ILV3P39522 585 aaKnown RBP6.88□□□□□ -1.31
SWT1YOR166C ELP4Q02884 456 aaKnown RBP6.88□□□□□ -1.31
SWT1YOR166C NOP53Q12080 455 aaKnown RBP6.86□□□□□ -1.31
SWT1YOR166C YGR273CP53329 174 aa6.81□□□□□ -1.32
SWT1YOR166C SPT23P35210 1082 aa6.8□□□□□ -1.32
SWT1YOR166C PEX29Q03370 554 aa6.78□□□□□ -1.32
SWT1YOR166C HAP5Q02516 242 aa6.77□□□□□ -1.33
SWT1YOR166C BNI4P53858 892 aa6.76□□□□□ -1.33
SWT1YOR166C MPC54Q08550 464 aa6.76□□□□□ -1.33
SWT1YOR166C YML082WQ04533 649 aaKnown RBP6.73□□□□□ -1.33
SWT1YOR166C DPS1P04802 557 aaKnown RBP6.72□□□□□ -1.33
SWT1YOR166C SLI15P38283 698 aa6.72□□□□□ -1.33
SWT1YOR166C NMA111P53920 997 aa6.69□□□□□ -1.34
SWT1YOR166C PTC2P39966 464 aaKnown RBP6.67□□□□□ -1.34
SWT1YOR166C DPL1Q05567 589 aa6.67□□□□□ -1.34
SWT1YOR166C SRC1Q03707 834 aa6.66□□□□□ -1.34
SWT1YOR166C KEX1P09620 729 aa6.65□□□□□ -1.35
SWT1YOR166C YPR015CQ12531 247 aa6.64□□□□□ -1.35
SWT1YOR166C RAM1P22007 431 aa6.63□□□□□ -1.35
SWT1YOR166C UBP14P38237 781 aaKnown RBP6.61□□□□□ -1.35
SWT1YOR166C SET1P38827 1080 aaKnown RBP6.6□□□□□ -1.35
SWT1YOR166C YLR326WQ06170 240 aaKnown RBP6.59□□□□□ -1.35
SWT1YOR166C ISU2Q12056 156 aa6.59□□□□□ -1.35
SWT1YOR166C CDC73Q06697 393 aa6.58□□□□□ -1.36
SWT1YOR166C PCS60P38137 543 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
SWT1YOR166C RAS1P01119 309 aa6.54□□□□□ -1.36
SWT1YOR166C VHR2P40041 505 aa6.53□□□□□ -1.36
SWT1YOR166C PDR1P12383 1068 aa6.51□□□□□ -1.37
SWT1YOR166C SDH2P21801 266 aa6.49□□□□□ -1.37
SWT1YOR166C YDR090CQ03193 310 aa6.49□□□□□ -1.37
SWT1YOR166C RAD54P32863 898 aa6.48□□□□□ -1.37
SWT1YOR166C GAP1P19145 602 aaPredicted RBP6.44□□□□□ -1.38
SWT1YOR166C AMS1P22855 1083 aa6.44□□□□□ -1.38
SWT1YOR166C SAS4Q04003 481 aa6.44□□□□□ -1.38
SWT1YOR166C GYP1Q08484 637 aa6.44□□□□□ -1.38
SWT1YOR166C YPR148CQ06523 435 aa6.42□□□□□ -1.38
SWT1YOR166C IFH1P39520 1085 aa6.41□□□□□ -1.38
SWT1YOR166C RPP1BP10622 106 aaKnown RBP6.4□□□□□ -1.39
SWT1YOR166C RGA2Q06407 1009 aa6.4□□□□□ -1.39
SWT1YOR166C BUD20Q08004 166 aaPredicted RBP6.4□□□□□ -1.39
SWT1YOR166C RGA1P39083 1007 aa6.38□□□□□ -1.39
SWT1YOR166C TRK1P12685 1235 aa6.37□□□□□ -1.39
SWT1YOR166C STR2P47164 639 aa6.37□□□□□ -1.39
SWT1YOR166C YRR1Q12172 810 aa6.36□□□□□ -1.39
SWT1YOR166C REF2P42073 533 aaPredicted RBP6.35□□□□□ -1.39
SWT1YOR166C CSC1Q06538 782 aa6.35□□□□□ -1.39
SWT1YOR166C TFB4Q12004 338 aa6.35□□□□□ -1.39
SWT1YOR166C ORC6P38826 435 aa6.34□□□□□ -1.39
SWT1YOR166C ISM1P48526 1002 aa6.34□□□□□ -1.39
SWT1YOR166C PRT1P06103 763 aaKnown RBP6.33□□□□□ -1.4
SWT1YOR166C KIC1P38692 1080 aa6.33□□□□□ -1.4
SWT1YOR166C YEL077CQ3E7X8 1277 aa6.33□□□□□ -1.4
SWT1YOR166C TUM1Q08686 304 aaKnown RBP6.31□□□□□ -1.4
SWT1YOR166C MRF1P30775 413 aaPredicted RBP6.31□□□□□ -1.4
SWT1YOR166C NUD1P32336 851 aa6.31□□□□□ -1.4
SWT1YOR166C PEX21P50091 288 aa6.31□□□□□ -1.4
SWT1YOR166C TY1A-DR4O74302 440 aa6.29□□□□□ -1.4
SWT1YOR166C TY1A-HP0C2I4 478 aaKnown RBP6.29□□□□□ -1.4
SWT1YOR166C TY1A-AP0CX57 440 aa6.29□□□□□ -1.4
SWT1YOR166C TY1A-PR1P0CX58 440 aa6.29□□□□□ -1.4
SWT1YOR166C TY1A-ORP0CX59 440 aa6.29□□□□□ -1.4
SWT1YOR166C TY1A-PR2P0CX60 440 aa6.29□□□□□ -1.4
SWT1YOR166C TY1A-DR5P0CX65 440 aa6.29□□□□□ -1.4
SWT1YOR166C TY1A-ER2P0CX66 440 aa6.29□□□□□ -1.4
SWT1YOR166C TY1A-GR3P0CX67 440 aa6.29□□□□□ -1.4
SWT1YOR166C TY1A-LR1P0CX68 440 aa6.29□□□□□ -1.4
SWT1YOR166C TY1A-MR2P0CX69 440 aa6.29□□□□□ -1.4
SWT1YOR166C TY1A-JR2P47099 440 aa6.29□□□□□ -1.4
SWT1YOR166C TY1A-DR1Q03856 440 aa6.29□□□□□ -1.4
SWT1YOR166C TY1A-ML1Q04706 440 aaKnown RBP6.29□□□□□ -1.4
SWT1YOR166C TY1A-BRQ12217 440 aa6.29□□□□□ -1.4
SWT1YOR166C TY1A-NL2Q12470 440 aa6.29□□□□□ -1.4
SWT1YOR166C TY1A-GR2Q12485 440 aa6.29□□□□□ -1.4
SWT1YOR166C COX6P00427 148 aa6.28□□□□□ -1.4
SWT1YOR166C SEC2P17065 759 aa6.28□□□□□ -1.4
SWT1YOR166C MAK21Q12176 1025 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms